Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20091
(714 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01610.1 68417.m00210 cathepsin B-like cysteine protease, put... 80 1e-15
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 77 2e-14
At4g01610.2 68417.m00211 cathepsin B-like cysteine protease, put... 75 6e-14
At1g02300.1 68414.m00173 cathepsin B-like cysteine protease, put... 67 9e-12
At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thi... 44 8e-05
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 44 1e-04
At2g21430.1 68415.m02550 cysteine proteinase A494, putative / th... 42 4e-04
At3g54940.3 68416.m06091 cysteine proteinase, putative contains ... 42 5e-04
At3g54940.2 68416.m06090 cysteine proteinase, putative contains ... 42 5e-04
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 41 7e-04
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 41 0.001
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 41 0.001
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 40 0.002
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 40 0.002
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 40 0.002
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 40 0.002
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si... 39 0.003
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 39 0.003
At3g19400.2 68416.m02460 cysteine proteinase, putative non-conse... 38 0.005
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse... 38 0.005
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 38 0.005
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 37 0.012
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 37 0.015
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 37 0.015
At1g06260.1 68414.m00662 cysteine proteinase, putative contains ... 36 0.020
At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 36 0.027
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 36 0.027
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 36 0.035
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 36 0.035
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 35 0.047
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 34 0.11
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 33 0.25
At3g49340.1 68416.m05394 cysteine proteinase, putative contains ... 31 0.76
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 31 0.76
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 3.1
At3g18040.2 68416.m02295 mitogen-activated protein kinase, putat... 29 4.0
At3g18040.1 68416.m02294 mitogen-activated protein kinase, putat... 29 4.0
At1g77860.1 68414.m09074 rhomboid family protein contains PFAM d... 28 5.3
At1g48540.2 68414.m05428 leucine-rich repeat family protein 28 7.1
At1g48540.1 68414.m05427 leucine-rich repeat family protein 28 7.1
>At4g01610.1 68417.m00210 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 DTSFAHLKKIMGV--IKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEVRDQG 195
+ + A K+++GV +HF +PI +H L LP+ FD R WP C ++ + DQG
Sbjct: 69 NATVAEFKRLLGVKPTPKKHFLGVPIVSHDPSL--KLPKAFDARTAWPQCTSIGNILDQG 126
Query: 196 SCGSCWAFGAVEAMTDRVC 252
CGSCWAFGAVE+++DR C
Sbjct: 127 HCGSCWAFGAVESLSDRFC 145
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +2
Query: 497 KMHKKCESGYDVNYKQDKQYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSG 676
K +KC S + + + K Y YTV + I AE++KNGPVE +FTVY D YKSG
Sbjct: 215 KCSRKCVSDNKL-WSESKHYSVSTYTVKSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSG 273
Query: 677 VYKHTQGDVSAG 712
VYKH G G
Sbjct: 274 VYKHITGSNIGG 285
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 285 SAEDLLSCCPI-CGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVP 458
S DLL+CC CG GC GG P AW+Y+ + G+V ++ C PY + C H P
Sbjct: 155 SVNDLLACCGFRCGDGCDGGYPIAAWQYFSYSGVV-------TEECDPYFDNTGCSH--P 205
Query: 459 GNRMPCSGDTKTPKCTKNANLDTTLITNKTNNTENMY 569
G C TPKC++ D L + + + + Y
Sbjct: 206 G----CEPAYPTPKCSRKCVSDNKLWSESKHYSVSTY 238
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 DTSFAHLKKIMGV--IKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEVRDQG 195
+ + A K+++GV F +PI +H I L LP+ FD R W C ++ + DQG
Sbjct: 72 NATVAEFKRLLGVKPTPKTEFLGVPIVSHDISL--KLPKEFDARTAWSQCTSIGRILDQG 129
Query: 196 SCGSCWAFGAVEAMTDRVC 252
CGSCWAFGAVE+++DR C
Sbjct: 130 HCGSCWAFGAVESLSDRFC 148
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/67 (52%), Positives = 42/67 (62%)
Frame = +2
Query: 497 KMHKKCESGYDVNYKQDKQYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSG 676
K +KC SG + +++ K YG Y V D I AE++KNGPVE AFTVY D YKSG
Sbjct: 218 KCARKCVSGNQL-WRESKHYGVSAYKVRSHPDDIMAEVYKNGPVEVAFTVYEDFAHYKSG 276
Query: 677 VYKHTQG 697
VYKH G
Sbjct: 277 VYKHITG 283
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 285 SAEDLLSCCP-ICGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVP 458
S DLL+CC +CG GC+GG P AW Y+KH G+V ++ C PY + C H P
Sbjct: 158 SVNDLLACCGFLCGQGCNGGYPIAAWRYFKHHGVV-------TEECDPYFDNTGCSH--P 208
Query: 459 GNRMPCSGDTKTPKCTK 509
G C TPKC +
Sbjct: 209 G----CEPAYPTPKCAR 221
>At4g01610.2 68417.m00211 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 DTSFAHLKKIMGV--IKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEVRDQG 195
+ + A K+++GV +HF +PI +H L LP+ FD R WP C ++ + G
Sbjct: 69 NATVAEFKRLLGVKPTPKKHFLGVPIVSHDPSL--KLPKAFDARTAWPQCTSIGNILGLG 126
Query: 196 SCGSCWAFGAVEAMTDRVC 252
CGSCWAFGAVE+++DR C
Sbjct: 127 HCGSCWAFGAVESLSDRFC 145
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +2
Query: 497 KMHKKCESGYDVNYKQDKQYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSG 676
K +KC S + + + K Y YTV + I AE++KNGPVE +FTVY D YKSG
Sbjct: 215 KCSRKCVSDNKL-WSESKHYSVSTYTVKSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSG 273
Query: 677 VYKHTQGDVSAG 712
VYKH G G
Sbjct: 274 VYKHITGSNIGG 285
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 285 SAEDLLSCCPI-CGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVP 458
S DLL+CC CG GC GG P AW+Y+ + G+V ++ C PY + C H P
Sbjct: 155 SVNDLLACCGFRCGDGCDGGYPIAAWQYFSYSGVV-------TEECDPYFDNTGCSH--P 205
Query: 459 GNRMPCSGDTKTPKCTKNANLDTTLITNKTNNTENMY 569
G C TPKC++ D L + + + + Y
Sbjct: 206 G----CEPAYPTPKCSRKCVSDNKLWSESKHYSVSTY 238
>At1g02300.1 68414.m00173 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]
Length = 379
Score = 67.3 bits (157), Expect = 9e-12
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +2
Query: 497 KMHKKCESGYDVNYKQDKQYGKHVYTVSGDEDHIRAELFKNGPVEGAFTVYSDLLSYKSG 676
K +KC S + + + K YG Y ++ D I AE++KNGPVE AFTVY D YKSG
Sbjct: 235 KCERKCVSRNQL-WGESKHYGVGAYRINPDPQDIMAEVYKNGPVEVAFTVYEDFAHYKSG 293
Query: 677 VYKHTQGDVSAG 712
VYK+ G G
Sbjct: 294 VYKYITGTKIGG 305
Score = 54.4 bits (125), Expect = 7e-08
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Frame = +1
Query: 22 DTSFAHLKKIMGVIKDEHFATLPIKTHKIDLIASLPENFDPRDKWPDCPTLNEVRDQ--- 192
+ + A K+++GVI+ A L + + DL LP+ FD R W C ++ +
Sbjct: 69 NATVAEFKRLLGVIQTPKTAYLGVPIVRHDLSLKLPKEFDARTAWSHCTSIRRILVGYIL 128
Query: 193 -----------------GSCGSCWAFGAVEAMTDRVCTILTELNI 276
G CGSCWAFGAVE+++DR C I LN+
Sbjct: 129 NNVLLWSTITLWFWFLLGHCGSCWAFGAVESLSDRFC-IKYNLNV 172
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 285 SAEDLLSCCPI-CGLGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVP 458
SA D+++CC + CG GC+GG P AW Y+K+ G+V +Q C PY + C H P
Sbjct: 175 SANDVIACCGLLCGFGCNGGFPMGAWLYFKYHGVV-------TQECDPYFDNTGCSH--P 225
Query: 459 GNRMPCSGDTKTPKCTK 509
G C TPKC +
Sbjct: 226 G----CEPTYPTPKCER 238
>At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thiol
protease identical to cysteine proteinase RD19a, thiol
protease SP:P43296, GI:435618 from [Arabidopsis
thaliana]
Length = 368
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 85 LPIKTHKIDLIAS--LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
LP +K ++ + LPE+FD W D + V++QGSCGSCW+F A A+
Sbjct: 120 LPKDANKAPILPTENLPEDFD----WRDHGAVTPVKNQGSCGSCWSFSATGAL 168
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +1
Query: 121 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
SLP+ D R K +N V+DQGSCGSCWAF A+ A+
Sbjct: 128 SLPDAIDWRAKG----AVNPVKDQGSCGSCWAFSAIGAV 162
>At2g21430.1 68415.m02550 cysteine proteinase A494, putative / thiol
protease, putative identical to SP:P43295 Probable
cysteine proteinase A494 precursor [Arabidopsis
thaliana]; strong similarity to cysteine proteinase
RD19A (thiol protease) GI:435618, SP:P43296 from
[Arabidopsis thaliana]
Length = 361
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 121 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
+LPE FD W D + V++QGSCGSCW+F A+
Sbjct: 131 NLPEEFD----WRDRGAVTPVKNQGSCGSCWSFSTTGAL 165
>At3g54940.3 68416.m06091 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 368
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEA 234
+ LPE+FD R+K + EV++QG+CGSCWAF A
Sbjct: 134 VDGLPEDFDWREKGG----VTEVKNQGACGSCWAFSTTGA 169
>At3g54940.2 68416.m06090 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 211
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEA 234
+ LPE+FD R+K + EV++QG+CGSCWAF A
Sbjct: 134 VDGLPEDFDWREKGG----VTEVKNQGACGSCWAFSTTGA 169
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTILTELN 273
LPE+ D R K + EV+DQG CGSCWAF GAVE + V L L+
Sbjct: 137 LPESIDWRKKG----AVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLS 185
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
I LP++ D R K P V+DQG CGSCWAF V A+
Sbjct: 134 ITDLPKSVDWRKKGAVAP----VKDQGQCGSCWAFSTVAAV 170
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
I LP++ D R K P V+DQG CGSCWAF V A+
Sbjct: 134 ITDLPKSVDWRKKGAVAP----VKDQGQCGSCWAFSTVAAV 170
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 121 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTILTELN 273
+LP++ D W + +V+DQGSCGSCWAF GAVE + V L L+
Sbjct: 137 ALPDSVD----WRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLS 186
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
LPE+ D W ++E++DQG+C SCWAF V A+
Sbjct: 133 LPESVD----WRQEGAVSEIKDQGTCNSCWAFSTVAAV 166
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 43 KKIMGVIKDEHFATLPIKTHKIDLI--ASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWA 216
+K +G +K F LP T ++ + LP FD W + + V++QG CGSCW+
Sbjct: 113 RKFLG-LKRRGFR-LPTDTQTAPILPTSDLPTEFD----WREQGAVTPVKNQGMCGSCWS 166
Query: 217 FGAVEAM 237
F A+ A+
Sbjct: 167 FSAIGAL 173
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +1
Query: 97 THKIDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEA 234
+HK+ A+LPE D W + ++ V+DQG CGSCW F GA+EA
Sbjct: 133 SHKVTE-AALPETKD----WREDGIVSPVKDQGGCGSCWTFSTTGALEA 176
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 243 QSMYYSNGTKHFHFSAEDLLSCC-PICGLGCSGGMPRLAWEYWKHFG 380
++ Y+ K S + L+ C GC+GG+P A+EY K G
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNG 221
>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
similarity to cysteine proteinase COT44 precursor
SP:P25251 from [Brassica napus] (Rape)
Length = 376
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
+PE D R K +N ++DQG+CGSCWAF A+
Sbjct: 145 VPETVDWRQKG----AVNPIKDQGTCGSCWAFSTTAAV 178
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
+ ++P++ D R K + EV++QGSCGSCWAF V A+
Sbjct: 135 VEAVPKSVDWRKKG----AVAEVKNQGSCGSCWAFSTVAAV 171
>At3g19400.2 68416.m02460 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 290
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
LP+ D W + V+DQG+CGSCWAF AV A+
Sbjct: 130 LPDEVD----WRANGAVVSVKDQGNCGSCWAFSAVGAV 163
>At3g19400.1 68416.m02461 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 362
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
LP+ D W + V+DQG+CGSCWAF AV A+
Sbjct: 130 LPDEVD----WRANGAVVSVKDQGNCGSCWAFSAVGAV 163
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + V+DQGSCG+CW+F A AM
Sbjct: 124 WRKKGAVTNVKDQGSCGACWSFSATGAM 151
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTILTELN 273
LP++ D W + + EV+DQG C SCWAF GAVE + V L L+
Sbjct: 137 LPKSVD----WRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLS 185
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 121 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
+LP + D R K P +++QGSCG CWAF AV A+
Sbjct: 129 ALPVSVDWRKKGAVTP----IKNQGSCGCCWAFSAVAAI 163
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTILTELN 273
LP++ D W + + EV+DQG C SCWAF GAVE + V L L+
Sbjct: 144 LPKSVD----WRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLS 192
>At1g06260.1 68414.m00662 cysteine proteinase, putative contains
similarity to thiol-protease, pre-pro-TPE4A protein
GI:3688528 [Pisum sativum]
Length = 343
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + +R+QG CG CWAF AV A+
Sbjct: 133 WRTQGAVTPIRNQGKCGGCWAFSAVAAI 160
>At3g48350.1 68416.m05277 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 364
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + + EV++Q CGSCWAF V A+
Sbjct: 132 WREKGAVTEVKNQQDCGSCWAFSTVAAV 159
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 124 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
LP+ D R++ P V+ QG CGSCWAF A A+
Sbjct: 127 LPDEVDWRERGAVVP---RVKRQGECGSCWAFAATGAV 161
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 115 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
+ +LP + D W + V++QG CGSCWAF V A+
Sbjct: 123 VNTLPTSVD----WRKNGAVTPVKNQGQCGSCWAFSTVVAV 159
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +1
Query: 97 THKIDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEA 234
+HKI A++P+ D W + ++ V++QG CGSCW F GA+EA
Sbjct: 133 SHKITE-ATVPDTKD----WREDGIVSPVKEQGHCGSCWTFSTTGALEA 176
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 243 QSMYYSNGTKHFHFSAEDLLSCC-PICGLGCSGGMPRLAWEYWKHFG 380
++ Y+ K S + L+ C GC GG+P A+EY K+ G
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNG 221
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + + V+ QG CG CWAF A+ A+
Sbjct: 136 WRNEGAVTPVKSQGECGGCWAFSAIAAV 163
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 121 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
++ +N + D W + V+ QG CG CWAF AV A+
Sbjct: 124 NVSDNGESMD-WRQEGAVTPVKYQGRCGGCWAFSAVAAV 161
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + V+ QG CG CWAF AV A+
Sbjct: 136 WRAEGAVTPVKYQGQCGCCWAFSAVAAV 163
>At3g49340.1 68416.m05394 cysteine proteinase, putative contains
PS00640: Eukaryotic thiol (cysteine) proteases
asparagine active site; similar to cysteine proteinase
GI:535454 from [Alnus glutinosam]
Length = 341
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 154 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 237
W + V+ Q CG CWAF AV A+
Sbjct: 133 WIQEGAVTSVKHQQQCGCCWAFSAVAAV 160
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 181 VRDQGSCGSCWAFGAVEAM 237
V+ QG CG CWAF +V A+
Sbjct: 154 VKYQGQCGCCWAFSSVAAV 172
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 417 CRPYEIPPCEHHVPGNRMPCSGDTKTPKCTK 509
C P PPC+ P PC T +C++
Sbjct: 343 CHPGPCPPCKAFAPPRSCPCGKKMVTTRCSE 373
>At3g18040.2 68416.m02295 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis
thaliana] gi|7106544|dbj|BAA92223; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to blast
and wounding induced mitogen-activated protein kinase
(BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 422
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 255 YSNGTKHFHFSAEDLLSCCPICGLGCSGGMPRLAWEY 365
Y NGT +SA LL I C G PR EY
Sbjct: 366 YRNGTSQTGYSARSLLKSASISASKCIGMKPRNKSEY 402
>At3g18040.1 68416.m02294 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK9) identical to ATMPK9 [Arabidopsis
thaliana] gi|7106544|dbj|BAA92223; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to blast
and wounding induced mitogen-activated protein kinase
(BWMK1) GB:AAD52659 [Oryza sativa]; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 510
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 255 YSNGTKHFHFSAEDLLSCCPICGLGCSGGMPRLAWEY 365
Y NGT +SA LL I C G PR EY
Sbjct: 454 YRNGTSQTGYSARSLLKSASISASKCIGMKPRNKSEY 490
>At1g77860.1 68414.m09074 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 319
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -3
Query: 613 EQFG----ADVVFVSGHSIYMFSVLFVLFVINVVSRFAFFVHFGVFVSPL 476
+QFG A + F+SG +F+VLFV + ++ S AFF G +S L
Sbjct: 154 QQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSAL 203
>At1g48540.2 68414.m05428 leucine-rich repeat family protein
Length = 1051
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 495 ESSCHRYRASCCRVRDVHTEGSRKVCNLD 409
E SC+R + CR+ +H+E N D
Sbjct: 357 EGSCNRKKKKICRLASIHSEAESTYVNSD 385
>At1g48540.1 68414.m05427 leucine-rich repeat family protein
Length = 1063
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 495 ESSCHRYRASCCRVRDVHTEGSRKVCNLD 409
E SC+R + CR+ +H+E N D
Sbjct: 357 EGSCNRKKKKICRLASIHSEAESTYVNSD 385
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,039
Number of Sequences: 28952
Number of extensions: 374658
Number of successful extensions: 1133
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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