Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20082
(788 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26350.1 68418.m03150 hypothetical protein 35 0.071
At1g04780.1 68414.m00474 ankyrin repeat family protein contains ... 34 0.12
At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein co... 31 0.87
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 30 1.5
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 3.5
At5g49450.1 68418.m06118 bZIP family transcription factor simila... 29 3.5
At5g38400.1 68418.m04642 hypothetical protein 29 3.5
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 29 3.5
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 29 3.5
At5g30490.1 68418.m03750 expressed protein 29 4.6
At5g23780.1 68418.m02792 agenet domain-containing protein contai... 28 6.1
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 28 6.1
At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related... 28 6.1
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 28 6.1
At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697... 28 8.1
At5g20480.1 68418.m02434 leucine-rich repeat transmembrane prote... 28 8.1
At5g08120.1 68418.m00947 myosin heavy chain-related identical to... 28 8.1
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 28 8.1
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 28 8.1
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 197 GYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQ 376
G+ AD+ FG++ M++H+ + L E+ KK L+K+ + LE K +L++
Sbjct: 31 GFINWADEEKPFGSATNEDMKKHKEEKNKLEEEKKK----LEKEKKQLEEEK---KQLEE 83
Query: 377 RLSNVETILLQKEEREK 427
+E ++ EREK
Sbjct: 84 EKKQLEFEVMGANEREK 100
>At1g04780.1 68414.m00474 ankyrin repeat family protein contains
Pfam PF00023: Ankyrin repeat
Length = 664
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = +2
Query: 95 ELKGRHAERNQTMVGRRRASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFR 274
+L R E+ + MVG+ +A + D N + +R PG D F +N+ E
Sbjct: 278 QLTWRRQEKTE-MVGQWKAKVYDMHNVVVSIKSRRVPGAMTDEELFSNTNQENDTESEDL 336
Query: 275 EKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQR 379
+L E K+ L K E G SR+ Q+
Sbjct: 337 GDILTEDEKRQLELALKLDSPEESSNGESSRISQK 371
>At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 683
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +2
Query: 299 KKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESI 466
++++ +L+ + E + + S D RLSN++T + +EE + + EA ES+
Sbjct: 31 QQIMKSLNTPKEVREDMLLIFSSFDNRLSNIKTAMTNQEENQNDALVARLEAAESV 86
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 317 LDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTT 496
+DK E LK M+S L+ ++ E L +E K SQ + ++ALE+ + ++ L T
Sbjct: 971 MDKITNENEKLKSMVSSLEMKIGETEKKL---QETTKISQDRLNQALEA-ESKLVKLKTA 1026
Query: 497 VTENPRKI 520
+ KI
Sbjct: 1027 MQRLEEKI 1034
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 317 LDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTT 496
+++K MLE K + +LD L T L K +R + +K EAL+S + L
Sbjct: 471 INRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKL-EALKSETSELSTLEMK 529
Query: 497 VTENPRKIKIQK 532
+ E ++ QK
Sbjct: 530 LKEELDDLRAQK 541
>At5g49450.1 68418.m06118 bZIP family transcription factor similar
to bZIP transcription factor GI:1769891 from
[Arabidopsis thaliana]
Length = 145
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 484 SNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLK 633
SN +S R S+ K ++ + ++LERR+ R AVK ++D+++
Sbjct: 23 SNRESARRSRLKKQKLMEDTIHEI-SSLERRIKENSERCRAVKQRLDSVE 71
>At5g38400.1 68418.m04642 hypothetical protein
Length = 151
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +2
Query: 200 YPGCADDLSSFGASNRRQMERHE---FREKM-LGEQVKKMLMALDKKHRMLEPLKGMISR 367
Y G + SS G RR+ +H + +M + ++ K L KK M+ L
Sbjct: 15 YEGKERNRSSNGEETRREQSKHARMTAKARMNVYKESMKPLPPKRKKSLMIISLMRKKED 74
Query: 368 LDQRLSNVETILLQKEEREKGSQKKTDEALESI 466
+NV + +KEE+EKG+ + E E +
Sbjct: 75 TQDDQNNVTVVEKEKEEKEKGTVQNIRENAEML 107
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 529 EVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITEDNLRT 663
E+ + L+ TLE++L + + + ++NL+ + EDN T
Sbjct: 1066 EISTGLKRKVETLEKKLEGKEKESQGLNKMLENLQEGLEEDNFLT 1110
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 451 STGKYPEIYTSSN-DDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQI 621
S +P T N ++ HR + EN+ EV+ + + ER+L D ++ VK I
Sbjct: 1057 SVAGHPPTATIKNLENGHRTNLENQFNEVEVNGNAGKSAAERQLENVDTLIDCVKENI 1114
>At5g30490.1 68418.m03750 expressed protein
Length = 236
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 RRRASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKK---ML 310
+++ S++D + + G Y + G D+L + S+ + +++ F E+ Q +K
Sbjct: 165 KQKLSVLDKTKKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDAR 224
Query: 311 MALDKKHR 334
+AL K R
Sbjct: 225 LALQSKRR 232
>At5g23780.1 68418.m02792 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 426
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +2
Query: 236 ASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKE 415
++N ++E+H F K ++ K+L K+ ++ LKG ++ + E+I ++ E
Sbjct: 325 SNNFCELEKHGFNVKAPQSRISKLLSLRGKQSMKMDELKG----AEKVTAEKESIKIENE 380
Query: 416 EREKGSQKKTDEALESIQKS 475
+ Q+ +E + I +S
Sbjct: 381 RKILELQRLNEEVDKEIAQS 400
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Frame = +2
Query: 272 REKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQK----EEREKGSQK 439
+++ LGE+V+ M L + + + ++ +S+L + L E ++ +K E+ KGS +
Sbjct: 712 QKEKLGEEVRDMKERLLLEEKQRKQMESELSKLKKNLRESENVVEEKRYMKEDLSKGSAE 771
Query: 440 K----TDEALESIQKSILALTTTVTENPRKIKIQK 532
+ + ++KS+ T+ ++ IQK
Sbjct: 772 SGAQTGSQRSQGLKKSLSGQRATMARLCEEVGIQK 806
>At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related
protein, putative similar to kinesin like protein
GB:CAB10194 from [Arabidopsis thaliana]
Length = 1313
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 484 SNDDSHRESKENKNTE-VDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITEDNLR 660
+N + R K N + + V K ESY N+ + ATD +E Q +N N DN
Sbjct: 535 NNQEMSRVEKINSSLQTVVLKDESYNNSHLKSSEATDVNMEDACCQTEN--NGSETDNAL 592
Query: 661 TLCQGM 678
T+ + M
Sbjct: 593 TVAETM 598
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 341 EPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALES 463
E +KG++ +++ +E++ QK+E E +KK +E E+
Sbjct: 89 ERVKGLMDQVNGMKHELESLRSQKDESEAKLEKKVEEVTET 129
>At5g44670.1 68418.m05473 expressed protein contains Pfam:PF01697
Domain of unknown function
Length = 519
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 384 QTWRRFFYRKKNARKVLK--RRQMKHWKVSRNLY*L*RRQSQRIQGK*KYRSRQ*IRILW 557
+T+R++ + K R V K RR K+ RN++ SQ +QGK +R+ IR
Sbjct: 402 RTYRKWGFEKLAYRDVKKVPRRDRKYAVQPRNVFATGVHMSQHLQGKTYHRAEGKIRYFH 461
Query: 558 KH 563
H
Sbjct: 462 YH 463
>At5g20480.1 68418.m02434 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21, Oryza sativa,
PIR:A57676
Length = 1031
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 353 GMISRLDQRLSNVETILLQKEEREKGSQKKTDEALE---SIQKSILALTTTVTENPR 514
G + +D+ L V + ++ E + +TDEA+ SI+ + TT+TE+PR
Sbjct: 956 GGSNAIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFFSSKTTITESPR 1012
>At5g08120.1 68418.m00947 myosin heavy chain-related identical to
myosin heavy chain-like protein GI:1732515 from
[Arabidopsis thaliana]
Length = 326
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 350 KGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVTENPRKIK 523
K +SRL +++++++T L +KEE K S + + + IQ+ + A V E IK
Sbjct: 136 KEEMSRLREQVNDLQTKLSEKEEVLK-SMEMSKNQVNEIQEKLEATNRLVAEKDMLIK 192
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 248 RQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
R E F+E++ E + ++L++ ++ R + RLDQ + LQ++E
Sbjct: 818 RNRETALFQERLQREDISRLLVSEERSERSERRRRSTSMRLDQNRDAALAMRLQRQE 874
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 233 GASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQK 412
G + + + E EK L + ++ L D KH+ L +K L L N +++
Sbjct: 44 GINKKYDDDDDEKAEKQL-KSLEDALQLHDVKHKELTEVKEAFDGLGLELENSRKKMIEL 102
Query: 413 EEREKGSQKKTDEALESIQK 472
E+R + S + E LE +QK
Sbjct: 103 EDRIRISALEA-EKLEELQK 121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,835,704
Number of Sequences: 28952
Number of extensions: 277521
Number of successful extensions: 1068
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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