Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20076
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 41 0.001
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 39 0.003
At3g09050.1 68416.m01064 expressed protein 33 0.20
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 33 0.26
At4g30790.1 68417.m04362 expressed protein 33 0.26
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 33 0.26
At2g03310.1 68415.m00288 expressed protein 31 0.81
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 31 1.1
At3g22790.1 68416.m02873 kinase interacting family protein simil... 31 1.1
At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 30 1.9
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 30 1.9
At4g35550.1 68417.m05052 homeobox-leucine zipper protein (HB-2) ... 29 2.5
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 29 2.5
At3g51220.1 68416.m05607 expressed protein contains Pfam doamin ... 29 2.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.5
At1g68150.1 68414.m07785 WRKY family transcription factor simila... 29 2.5
At5g16100.1 68418.m01881 hypothetical protein 29 3.3
At4g20830.2 68417.m03022 FAD-binding domain-containing protein s... 29 3.3
At4g20830.1 68417.m03023 FAD-binding domain-containing protein s... 29 3.3
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 29 3.3
At1g16760.1 68414.m02013 protein kinase family protein contains ... 29 3.3
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 29 3.3
At3g61390.2 68416.m06872 U-box domain-containing protein several... 29 4.3
At3g61390.1 68416.m06871 U-box domain-containing protein several... 29 4.3
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 29 4.3
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 4.3
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 29 4.3
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 29 4.3
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 4.3
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 4.3
At5g27330.1 68418.m03263 expressed protein 28 5.7
At4g13110.1 68417.m02043 BSD domain-containing protein contains ... 28 5.7
At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 28 5.7
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 28 5.7
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 28 5.7
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 28 5.7
At5g58100.1 68418.m07270 expressed protein 28 7.5
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 28 7.5
At2g36650.1 68415.m04495 expressed protein 28 7.5
At2g30250.1 68415.m03682 WRKY family transcription factor 28 7.5
At1g33500.1 68414.m04146 hypothetical protein 28 7.5
At1g22260.1 68414.m02782 expressed protein 28 7.5
At1g03470.1 68414.m00328 kinase interacting family protein simil... 28 7.5
At5g61920.1 68418.m07773 hypothetical protein 27 9.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 27 9.9
At4g08630.1 68417.m01420 expressed protein ; expression supporte... 27 9.9
At2g21720.1 68415.m02584 hypothetical protein contains Pfam prof... 27 9.9
At2g21380.1 68415.m02544 kinesin motor protein-related 27 9.9
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 27 9.9
At1g24540.1 68414.m03089 cytochrome P450, putative similar to GB... 27 9.9
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +2
Query: 230 ESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTA 409
E +Y TIKE V+ L KSL+E+ L+ + E + D S L I+ +K
Sbjct: 503 EEKYRQANATIKEKEFVISNLLKSEKSLVERAFQLRTELESASSDVSNLFSKIERKDKIE 562
Query: 410 EIQNRMIMRLQKQ 448
+ +I + Q Q
Sbjct: 563 DGNRFLIQKFQSQ 575
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +2
Query: 194 SNKTKRLRTGQDESRYIDVKLTIKEN-----TVVVETLKNEAKSLLEQNLALKEQCEEKT 358
S + LRT ++E+ + K+ + + T ++ LKNE SL Q + + E +
Sbjct: 952 SELDEELRTKKEENVQMHDKINVASSEIMALTELINNLKNELDSLQVQKSETEAELEREK 1011
Query: 359 RDCSRLEINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMK 517
++ S L I +K Q L+++ ++ ++LF E + LN++T + K
Sbjct: 1012 QEKSELSNQITDVQKALVEQEAAYNTLEEEHKQINELFKETEATLNKVTVDYK 1064
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/103 (22%), Positives = 50/103 (48%)
Frame = +2
Query: 212 LRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIK 391
+ + ++E++ + +K + E + V++ + + L+ + +KE+ +EK + S L K
Sbjct: 1 MNSAEEENKSLSLK--VSEISDVIQQGQTTIQELISELGEMKEKYKEKESEHSSLVELHK 58
Query: 392 THEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMKL 520
THE+ + Q + L+ + +KL + LN KL
Sbjct: 59 THERESSSQ---VKELEAHIESSEKLVADFTQSLNNAEEEKKL 98
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 27 KNEEKTLSLSEKENKLTELVSTINGLKEENN-------SLKSLNDVITKEKETQASELER 185
K E + + E +N + ELVS LKE ++ SL+ +++ +E T+ SELE
Sbjct: 278 KIAELSNEIKEAQNTIQELVSESGQLKESHSVKDRDLFSLRDIHETHQRESSTRVSELEA 337
Query: 186 SCEVIKQNAFEL 221
E +Q +L
Sbjct: 338 QLESSEQRISDL 349
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 203 TKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEI 382
T L +R ID++ I T VVE L+ + + ++ + L++ EE+ + S L
Sbjct: 756 TLELELESVRARIIDLETEIASKTTVVEQLEAQNREMVARISELEKTMEERGTELSALTQ 815
Query: 383 NIKTHEKTAEIQ-NRMIMRLQKQKQEDDKLFIEKK 484
++ ++K + + + + E D + ++K+
Sbjct: 816 KLEDNDKQSSSSIETLTAEIDGLRAELDSMSVQKE 850
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 212 LRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIK 391
L ++E + + K+ N + + +N + L+ ++ LKE K RD L +
Sbjct: 265 LNNAEEEKKVLSQKIAELSNEI--KEAQNTIQELVSESGQLKESHSVKDRDLFSLRDIHE 322
Query: 392 THEKTAEIQ-NRMIMRLQKQKQEDDKLFIEKK 484
TH++ + + + + +L+ +Q L ++ K
Sbjct: 323 THQRESSTRVSELEAQLESSEQRISDLTVDLK 354
>At3g09050.1 68416.m01064 expressed protein
Length = 258
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 45 LSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNA 212
L + E +NKL E I + E KSL D ++E E E+ EV K++A
Sbjct: 137 LEIEENDNKLAEFEEKIQVDRNEGLFFKSLRDKKPVDREQAREETEKIQEVTKESA 192
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +2
Query: 227 DESRYIDVKLTIKENTVVVE---TLKNEAKSLLEQNLALKEQ---CEEKTRDCSRLEINI 388
++SR++++ + ++ +V+ LK E L + A +++ CEEKT+ +++
Sbjct: 509 EKSRHVEMGNDLPDHGGIVKHRNLLKPEENKLFTEKPAKQKKELLCEEKTKRIQNQQLDK 568
Query: 389 KTHEKTAEIQNRMI 430
KTH+K AE +
Sbjct: 569 KTHQKAAETNQECV 582
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 21 DTKNEEKTLSLSEKENKLTELVSTINGLKEENNSLK-SLNDVITKEKETQASELERSCEV 197
D + EE + L E + + E + N +EN + + + EKE A E+E++CE
Sbjct: 860 DLEQEEMRMRLQEAKER--ERLHRENQEHQENERKQHEYSGEESDEKERDACEMEKTCET 917
Query: 198 IKQ 206
K+
Sbjct: 918 TKE 920
>At4g30790.1 68417.m04362 expressed protein
Length = 1148
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 51 LSEKENKLTELVSTINGLKEENNSLK---SLNDVITKEKETQASELERSCEVIKQNA 212
L EK NKL+E+ S +NG EE ++L N + +E + + LE ++ A
Sbjct: 821 LMEKSNKLSEMESKLNGAMEEVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEA 877
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 54 SEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQ---ASELERSCEVIKQNA-FEL 221
S ++NKLTE STIN L+E +S D ++K+ E + L+ E +K A FE
Sbjct: 979 SIQKNKLTEAHSTINSLEETLAQTESNMDSLSKQIEDDKVLTTSLKNELEKLKIEAEFER 1038
Query: 222 DKM 230
+KM
Sbjct: 1039 NKM 1041
>At2g03310.1 68415.m00288 expressed protein
Length = 176
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 666 RNSCCLFRSYIRFQFGYTTLNKIFLCSQLVHRFSA*LEILYRRII 532
+NS C+F++ R + Y T ++F ++ FS L ++Y +++
Sbjct: 81 KNSVCIFQAVERVRCSYLTRKRVFWSLTIIGGFSLVLSLVYVKLV 125
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/76 (19%), Positives = 37/76 (48%)
Frame = +3
Query: 18 SDTKNEEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEV 197
+D + L + + T +S + +KEE +L++ D + KEK+ E E +
Sbjct: 267 ADEASVASKAQLEVAQARHTSAISELESVKEELQTLQNEYDALVKEKDLAVKEAEEAVIA 326
Query: 198 IKQNAFELDKMKADIL 245
K+ +++++ +++
Sbjct: 327 SKEVERKVEELTIELI 342
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 51 LSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNAFE 218
L + E + +L I+ +KEEN +L LND ETQ E+ S + IK+ E
Sbjct: 477 LRDLETRNLKLEGDISSVKEENQNLSELNDSSMIFLETQKCEIS-SLKEIKEKLEE 531
>At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing
protein and genefinder
Length = 559
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 314 LEQNLALKEQCEEKTRDCSRLEINIKTHE 400
+EQ L +KE+ EK CS +E++ + HE
Sbjct: 481 VEQRLLMKERQMEKEVGCSSIEVDFEVHE 509
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 230 ESRYIDVKLTIKENTVVVETLKNEAKSLLEQNL--------ALKEQCE-EKTRDCSRLEI 382
E ++++ ++EN ++E+LK E E+++ ALKE E E+ R+ R E+
Sbjct: 139 EKEVMELESRMEENLKLLESLKLEVDVANEEHVLVEVAKIEALKECKEVEEQREKERKEV 198
Query: 383 NIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMKL 520
+ H++ I+ MI +++ K +++L E + L +KL
Sbjct: 199 SESLHKRKKRIR-EMIREIERSKNFENEL-AETLLDIEMLETQLKL 242
>At4g35550.1 68417.m05052 homeobox-leucine zipper protein (HB-2) /
HD-ZIP protein HB2 homeodomain protein [Populus tremula
x Populus tremuloides] GI:3955021; contains Pfam
PF00046: Homeobox domain
Length = 268
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 499 TNEQYEALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESD 636
T+EQYE L++ E E LT Q+DL GR+ L +D
Sbjct: 39 TDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYAD 84
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12)
/ HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 69 KLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQ 206
K +L N L+ N+L S +++ KEK++ SEL+R E +++
Sbjct: 83 KTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQR 128
>At3g51220.1 68416.m05607 expressed protein contains Pfam doamin
PF05701: Plant protein of unknown function (DUF827)
Length = 186
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 251 KLTIKENTVVVETLKNEAKSLLEQNLALKE---QCEEKTRDCSRL-EINIKTHEKTAEIQ 418
++ + +N + ++ KS+ ++ + KE + EE+ + S+L E + E T E
Sbjct: 25 RILLGDNYISKSVERSSCKSIQDELVEAKENLKKAEEENKVLSQLIESLTQELETTKEKL 84
Query: 419 NRMIMRLQKQKQ-EDDKLFIEKKTKLNELTNNMKLXXXXXXXXXXXSSQAEKR 574
N + + Q EDD FIE+ T +NE N ++ + EKR
Sbjct: 85 NHSLRNFPEHPQVEDDLKFIEEST-VNEPDNITEIKMNRFDRNEVYGDRLEKR 136
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 93 INGLKEENNSLKSLNDVITKEKETQASELERSCEV-IKQNAFELDKMKADIL 245
INGL E+N L++L ++++ E++ +EL+ + EV +K E A +L
Sbjct: 571 INGLVEQNVKLRNLVRSLSEQIESRETELKETFEVDLKNKTDEASAKVATVL 622
>At1g68150.1 68414.m07785 WRKY family transcription factor similar
to DNA-binding protein ABF2 GI:1159879 from [Avena
fatua]
Length = 374
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 212 LRTGQDESRYIDVKLTIKENT-VVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINI 388
++ +D+S + ++ +EN + L+ + +S+ E+N L++ E+ D LE+
Sbjct: 70 VKEDEDDSSSLGLRTREEENEREELLQLQIQMESVKEENTRLRKLVEQTLEDYRHLEMKF 129
Query: 389 KTHEKTAEIQNRMIMRLQKQKQED 460
+KT ++ M + +Q ++ D
Sbjct: 130 PVIDKTKKMDLEMFLGVQGKRCVD 153
>At5g16100.1 68418.m01881 hypothetical protein
Length = 356
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 658 LLFVPFVYQIPVRLYDPQQDLSV*-SIGSPLLCLTRDPLPPHHNLSSE 518
+L +P +P+ L P +D V S+ SP L P+PPH L E
Sbjct: 280 MLTLPSSTDVPLSLLSPNEDHDVPLSLLSPEEALDIQPVPPHVELREE 327
>At4g20830.2 68417.m03022 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 505 R*FVQFSFFLYE*FIVFLFLFLKSHNHSVLDFGSFLVCF 389
R FV FF + F++FL L L S + S + SFL CF
Sbjct: 7 RTFVSVPFFFF--FLLFLSLPLSSFSQSNSVYNSFLKCF 43
>At4g20830.1 68417.m03023 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 570
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 505 R*FVQFSFFLYE*FIVFLFLFLKSHNHSVLDFGSFLVCF 389
R FV FF + F++FL L L S + S + SFL CF
Sbjct: 7 RTFVSVPFFFF--FLLFLSLPLSSFSQSNSVYNSFLKCF 43
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 296 NEAKSLLEQNLALKEQCEEKTR-DCSRLEINIKTHEKTAEIQNRMIMRLQKQKQEDDKLF 472
+E L+EQ E+ EKTR + ++ + + E ++ + QK+K++ K
Sbjct: 250 DERARLIEQRAIKNEEEMEKTRLEREMIQKAMCEQNEANEEAMKLAEKHQKEKEKLHKRI 309
Query: 473 IEKKTKLNELTNNMKL 520
+E + KLNE T ++L
Sbjct: 310 MEMEAKLNE-TQELEL 324
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/89 (22%), Positives = 45/89 (50%)
Frame = +2
Query: 194 SNKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSR 373
+ + ++LRT ++E R ++K+T + +VE + +AK+ LE A E + + R
Sbjct: 357 ATELQKLRT-EEERRLEELKMTEETAMSIVENERAKAKTALEAAEAANRLAEVEAK--RR 413
Query: 374 LEINIKTHEKTAEIQNRMIMRLQKQKQED 460
+ +K +++ I+R +K ++
Sbjct: 414 VHAEMKVLKESDSFSRHSIVRYRKYSVQE 442
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 63 ENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELE 182
+ K TEL I L+ +N L ND I ++ E+ +E+E
Sbjct: 28 DGKSTELNQKIGDLESQNQELARDNDAINRKIESLTAEIE 67
>At3g61390.2 68416.m06872 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 435
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 27 KNEEKTLSLSEKENKLTELVSTINGLKEENN-SLKSLNDVITKEKE 161
+N+E SE E ++TE + I L+E+NN S+++ + +++E
Sbjct: 280 RNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIREEQEE 325
>At3g61390.1 68416.m06871 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 373
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 27 KNEEKTLSLSEKENKLTELVSTINGLKEENN-SLKSLNDVITKEKE 161
+N+E SE E ++TE + I L+E+NN S+++ + +++E
Sbjct: 280 RNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIREEQEE 325
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +3
Query: 36 EKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNAF 215
E L SEKE T L I LKEE K K+ E + E +R E +K+
Sbjct: 436 ENLLPKSEKEGGETCLKRLIEALKEEKEEAK-------KKVEEEEEEKQRKKEKVKEIEA 488
Query: 216 ELDKMK 233
E +K K
Sbjct: 489 EKEKKK 494
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 481 KN*IERTNEQYEALKRDYDAAVKDLESSREAVNQL-TTQKDLVEGRIAELES 633
K +E +++Y+AL +D D AVK +E + A ++ T ++L IA ES
Sbjct: 305 KEELETLHKEYDALVQDKDVAVKKVEEAMLASKEVEKTVEELTIELIATKES 356
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 197 NKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRL 376
+KTK L+ G++E KL ++E V +L+ E SL K+ + S+
Sbjct: 62 DKTKELK-GREELVTEKEKL-LQERQDKVASLETEVSSLR------KKGSSDSVELLSKA 113
Query: 377 EINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMK 517
+ EK E+ + + + K+K+ + E + KLNEL + ++
Sbjct: 114 QARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVE 160
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 197 NKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRL 376
+KTK L+ G++E KL ++E V +L+ E SL K+ + S+
Sbjct: 62 DKTKELK-GREELVTEKEKL-LQERQDKVASLETEVSSLR------KKGSSDSVELLSKA 113
Query: 377 EINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMK 517
+ EK E+ + + + K+K+ + E + KLNEL + ++
Sbjct: 114 QARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVE 160
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +2
Query: 251 KLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNRMI 430
KLT EN + E L+ ++ + N L++ +E+ + L K HE T E NR+
Sbjct: 178 KLT-SENKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQ 236
Query: 431 MRLQKQKQEDDKLFIEKKTKLNELTNNMK 517
+ + + E ++ EK LN++ + K
Sbjct: 237 GQKNETEAELEREKQEKPALLNQINDVQK 265
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 33 EEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELE 182
+ + + + E KL L STI L++EN L +N + ++ Q SE +
Sbjct: 457 DTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETD 506
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 520 LKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESD 636
LKR+ + ++ LES RE +++ ++DLV+ +L+S+
Sbjct: 149 LKREANGLIRKLESEREEFSRVCDERDLVKSGF-DLQSE 186
>At4g13110.1 68417.m02043 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 316
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 18 SDTKNEEKTLSLSEKENKLTELVSTINGLKE 110
SD +N L L EK N++ EL++ G+KE
Sbjct: 153 SDFENWSLGLKLEEKRNEIVELINGNKGVKE 183
>At2g25320.1 68415.m03029 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1663
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +2
Query: 194 SNKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSR 373
+NK + +R E + I+++ KE + + + L + N LK + + + SR
Sbjct: 1351 ANKEELVRL--KEEKKIEIQSMTKEKSSITQKLSESEAA----NTRLKSEMKAEADRFSR 1404
Query: 374 LEINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNEL 502
+ ++ + E Q I R ++Q E DKL EKKT L+ L
Sbjct: 1405 EKKDLVEQFRDVESQLEWI-RSERQ-DEIDKLSSEKKTLLDRL 1445
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +2
Query: 260 IKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNRMIMRL 439
+KE + K K+++++N KE+ E + R + + + K ++ + Q + +L
Sbjct: 271 LKEKLQQEKEQKLLQKAIVDENNKEKEETESRKRIKKQQDESEKEQKRREKEQAELKKQL 330
Query: 440 QKQKQEDDKLFIEKKTKLNELT 505
Q QKQ KK+K + LT
Sbjct: 331 QVQKQASIMERFLKKSKDSSLT 352
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 36 EKTLSLSEKE----NKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIK 203
EK L L EKE N+ +L S + E + K L ++ TKEKE ++ + +
Sbjct: 297 EKKLKLKEKELEEWNRKVDL-SMSKSKETEEDITKRLEELTTKEKEAHTLQITLLAKENE 355
Query: 204 QNAFE 218
AFE
Sbjct: 356 LRAFE 360
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 36 EKTLSLSEKE----NKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIK 203
EK L L EKE N+ +L S + E + K L ++ TKEKE ++ + +
Sbjct: 310 EKKLKLKEKELEEWNRKVDL-SMSKSKETEEDITKRLEELTTKEKEAHTLQITLLAKENE 368
Query: 204 QNAFE 218
AFE
Sbjct: 369 LRAFE 373
>At5g58100.1 68418.m07270 expressed protein
Length = 945
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 407 AEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTN 508
AE+ +++L + K ED K+F+EK + + +N
Sbjct: 343 AELIQSKVLQLLRGKNEDMKVFLEKDLRAGDFSN 376
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 57 EKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNAFELDKMKA 236
E+ T + I LKE N S+K++ KEK + ++ RS +++ +++ ++
Sbjct: 1340 EESGSTTSPCNGIVILKEINPSIKTIEQAFVKEKGRLSRQITRSTSQKRRDRRKIENIQP 1399
Query: 237 D 239
D
Sbjct: 1400 D 1400
>At2g36650.1 68415.m04495 expressed protein
Length = 373
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 18 SDTKNEEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEV 197
S T N E + S S +EN E + N K+E SLKS + + +++ ER C +
Sbjct: 47 SSTSNPESSSSPS-RENDEEEEAESPNQQKQEILSLKSRFEELQRKEYEMELHFERFCNL 105
Query: 198 IKQNAFELD 224
Q ++
Sbjct: 106 KDQEVMLIE 114
>At2g30250.1 68415.m03682 WRKY family transcription factor
Length = 393
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 206 KRL-RTGQDESRYIDVKLTIKENTVVVETLKN 298
KR+ R G+DE I+V +KE VVV+T+ +
Sbjct: 292 KRMKREGEDEGMSIEVSKGVKEPRVVVQTISD 323
>At1g33500.1 68414.m04146 hypothetical protein
Length = 254
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 206 KRLRTGQDESRYIDVKLTIKENTVV--VETLKNEAKSLLEQNLALKEQCEEKTRDCSRLE 379
K LR+ + K++++E V + TL+ + + L + LKE+ ++KTR +R E
Sbjct: 9 KTLRSQMTDVEDHAAKVSVEEQMQVTTISTLEKDLEHALSETKRLKEETDQKTR--TRGE 66
Query: 380 INIKTHEKTAEIQN 421
I EK +I +
Sbjct: 67 ICSHILEKQRKISS 80
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/80 (21%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 281 VETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHE-KTAEIQNRMIMRLQKQKQE 457
++ L++EAK L+ ++ + + + L ++KT E K E+ ++ + K++
Sbjct: 393 IDKLESEAKGLVSKHADAESAISQLKEEMETLLESVKTSEDKKQELSLKLSSLEMESKEK 452
Query: 458 DDKLFIEKKTKLNELTNNMK 517
+KL + + ++ EL K
Sbjct: 453 CEKLQADAQRQVEELETLQK 472
>At1g03470.1 68414.m00328 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 269
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 57 EKENKLTELVSTINGLKEENNSLKS-LNDVITKEKETQASELERSCEVIKQNAFELDKMK 233
EK + ++ I LKEEN+ LK + + + + + + +R ++ K FE K+K
Sbjct: 185 EKREAIRQMSVAIQMLKEENSELKKRVTNTVVARRNKEGGDSQRKQQMWK--PFEFKKIK 242
Query: 234 AD 239
+
Sbjct: 243 LE 244
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 281 VETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNR 424
++ L N+ + L +ALKE R+ L +I+ E EIQ R
Sbjct: 64 IDRLSNDNRKLASSYVALKEDLTVADREVQGLRAHIRKTETDHEIQIR 111
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 427 DYETSKTETGRR*TIHREKN*IERTNEQYEALKRDYDAAVKDLESSREAVNQLTTQKDLV 606
D++ K +T R + E+ +E+ E KR+ + A E+ +A+ +L K L+
Sbjct: 155 DWKAHKIQTIERRKMVDEE--LEKIQEAMPEYKREAELAE---EAKYDALEELENTKGLI 209
Query: 607 EGRIAELESDIRTEQTAR 660
E ELE + EQ A+
Sbjct: 210 EELKLELEKAEKEEQQAK 227
>At4g08630.1 68417.m01420 expressed protein ; expression supported
by MPSS
Length = 845
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 281 VETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNRMIMR 436
V+ L+ E +SLLE+ +++CEE +LE ++ + + R++ R
Sbjct: 447 VDMLQEENESLLEKLRLAEDKCEEADARAKQLEKQVEILGEGVTMDARLLSR 498
>At2g21720.1 68415.m02584 hypothetical protein contains Pfam
profile: PF04842 plant protein of unknown function
(DUF639)
Length = 703
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 33 EEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASE 176
+EK + +++KE L L S +N +EE ++ + +E SE
Sbjct: 489 KEKVVKVTDKEEMLASLESAVNQSREEGKVIEKARATTAELEEEGISE 536
>At2g21380.1 68415.m02544 kinesin motor protein-related
Length = 1058
Score = 27.5 bits (58), Expect = 9.9
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Frame = +2
Query: 194 SNKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLL---------EQNLALKEQC 346
+++ KR+ ++ ID K IK+ + TLK E L E+ L+LK+Q
Sbjct: 415 ASRAKRIEINASRNKIIDEKSLIKKYQKEISTLKVELDQLRRGVLVGVSHEELLSLKQQL 474
Query: 347 EE-KTRDCSRLEINIKTHEKTAEIQNRMIMRLQK 445
+E + + SRLE + E A + +R I +L K
Sbjct: 475 QEGQVKMQSRLE---EEEEAKAALMSR-IQKLTK 504
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 30 NEEKTLSLSEKENKLTEL--VSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIK 203
N EKTLSL + EL V K + S + +N + +EKE +ELE +K
Sbjct: 277 NNEKTLSLRRVLIEKDELDRVYKQETKKMQELSREKINRIF-REKERLTNELEAKMNNLK 335
Query: 204 QNAFELDKMKA 236
+ +LDK +A
Sbjct: 336 IWSKQLDKKQA 346
>At1g24540.1 68414.m03089 cytochrome P450, putative similar to
GB:AAB87111, similar to ESTs dbj|D41610, gb|T20562 and
emb|Z26058
Length = 522
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 502 NEQYEALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESDIRTEQ 651
N E K + A ++ SSR + TT +DLV+ ++ L ++ T +
Sbjct: 129 NADDELWKEERRVAKTEMHSSRFLEHTFTTMRDLVDQKLVPLMENLSTSK 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,194,339
Number of Sequences: 28952
Number of extensions: 212140
Number of successful extensions: 1121
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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