Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0100
(735 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g31470.1 68417.m04471 pathogenesis-related protein, putative ... 43 2e-04
At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1) i... 42 3e-04
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 41 7e-04
At4g33720.1 68417.m04788 pathogenesis-related protein, putative ... 41 7e-04
At4g33730.1 68417.m04789 pathogenesis-related protein, putative ... 40 0.002
At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protei... 39 0.003
At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protei... 39 0.003
At4g25780.1 68417.m03710 pathogenesis-related protein, putative ... 39 0.003
At3g19690.1 68416.m02494 pathogenesis-related protein, putative ... 37 0.012
At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protei... 37 0.016
At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protei... 36 0.021
At5g26130.1 68418.m03108 pathogenesis-related protein, putative ... 36 0.028
At1g50060.1 68414.m05617 pathogenesis-related protein, putative ... 36 0.028
At3g09590.1 68416.m01139 pathogenesis-related protein, putative ... 35 0.049
At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protei... 33 0.15
At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1) i... 32 0.45
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 32 0.45
At4g33710.1 68417.m04787 pathogenesis-related protein, putative ... 31 0.60
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 30 1.4
At2g44460.1 68415.m05528 glycosyl hydrolase family 1 protein con... 30 1.4
At5g27840.2 68418.m03338 serine/threonine protein phosphatase PP... 28 5.6
At5g27840.1 68418.m03337 serine/threonine protein phosphatase PP... 28 5.6
At4g31540.1 68417.m04478 exocyst subunit EXO70 family protein (E... 28 5.6
At3g18770.1 68416.m02382 expressed protein 27 9.8
At1g74420.2 68414.m08622 xyloglucan fucosyltransferase, putative... 27 9.8
At1g74420.1 68414.m08621 xyloglucan fucosyltransferase, putative... 27 9.8
At1g50780.1 68414.m05711 hypothetical protein weak similarity to... 27 9.8
>At4g31470.1 68417.m04471 pathogenesis-related protein, putative
similar to pathogenesis related protein-1 from Zea mays
GI:3290004; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 185
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W S R+GCAI +T F++CNY P GN +G P+
Sbjct: 149 WKKSSRIGCAISFCKTGDT---FIICNYDPPGNIVGQPPF 185
>At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1)
identical to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains an extracellular proteins
SCP/Tpx-1/Ag5/PR-1/Sc7 signature (PDOC00772)
Length = 176
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W DS R+GCA + R + +V+C+Y P GNY+G PY
Sbjct: 139 WRDSVRLGCA--SVRCKNDEYIWVICSYDPPGNYIGQRPY 176
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W D+ R+GCA F+ CNY P GNY+G PY
Sbjct: 170 WRDTKRLGCARVVCENGA--GVFITCNYDPPGNYVGEKPY 207
>At4g33720.1 68417.m04788 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 163
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 474 WEKADRPLHSDGWSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W+K W +S+R+GCA Q F+ CNY P GN++G PY
Sbjct: 115 WDKQCGHYTQVVWRNSERLGCAKVRCNNGQT---FITCNYDPPGNWVGEWPY 163
>At4g33730.1 68417.m04789 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 172
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W S R+GC G ++ S VVCNY PAGNY+G PY
Sbjct: 136 WRGSARLGC--GKAKCNNGASI-VVCNYDPAGNYIGARPY 172
>At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protein
low similarity to SP|Q05968 Pathogenesis-related protein
1 precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 205
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W + VGCA S+ + F V+C Y P+GNY G P+
Sbjct: 156 WRTTTAVGCA--RSKCDNNRGFLVICEYSPSGNYEGESPF 193
>At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 210
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W ++ R+GCA F+ CNY P GNY+G PY
Sbjct: 173 WRETRRLGCARVVCENGA--GVFITCNYDPPGNYVGEKPY 210
>At4g25780.1 68417.m03710 pathogenesis-related protein, putative
similar to gene PR-1 protein - Medicago truncatula,
SP|Q40374; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 190
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W + RVGCA F+ CNY P GNY+G PY
Sbjct: 154 WKSTRRVGCA---RVVCDNGGIFMTCNYDPPGNYIGQKPY 190
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 313 SIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHENYKFAPLKSSDFQKTGKKQIA 492
S+++ F+ GEN+YW +N +P A+ +W +E Y + Q G
Sbjct: 97 SVSNGEFNLGENIYWGYGAN----WSPADAVVAWASEKRFYHYGSNTCDAGQMCG----- 147
Query: 493 HYTQM 507
HYTQ+
Sbjct: 148 HYTQI 152
>At3g19690.1 68416.m02494 pathogenesis-related protein, putative
similar to PR-1a protein GI:19944 GB:X06930 from
[Nicotiana tabacum]; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 161
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W ++ R+GCA + F+ CNY P GNY+G P+
Sbjct: 125 WKNTVRLGCAKVVCNSG---GTFITCNYDPPGNYIGEKPF 161
>At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 161
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W ++ ++GCA F+ CNY P GN+LG PY
Sbjct: 124 WKNTQKIGCAHVICNGGG--GVFLTCNYDPPGNFLGRKPY 161
>At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protein
similar to pathogenesis related protein-1 GB:AAC25629
GI:3290004 from [Zea mays]; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 241
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPYKS 635
W DS +VGCA S + +C Y P GNY G P+ S
Sbjct: 183 WRDSTKVGCA---SVDCSNGGVYAICVYNPPGNYEGENPFGS 221
>At5g26130.1 68418.m03108 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 164
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W S+ VGCA FV CNY P GNY G PY
Sbjct: 128 WRTSEWVGCA---KVKCDNGGTFVTCNYYPPGNYRGRWPY 164
>At1g50060.1 68414.m05617 pathogenesis-related protein, putative
similar to prb-1b [Nicotiana tabacum] GI:19970; contains
Pfam profile PF00188: SCP-like extracellular protein
Length = 161
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 510 WSDSDRVGCA-IGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W DS ++GCA + + T +FV CNY GN++G PY
Sbjct: 125 WRDSVKIGCARVQCTNTW----WFVSCNYNSPGNWVGEYPY 161
>At3g09590.1 68416.m01139 pathogenesis-related protein, putative
similar to SP|Q05968 Pathogenesis-related protein 1
precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 186
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W ++ VGCA + + + VVC Y P GNY G P+
Sbjct: 149 WRETTAVGCA--RVKCHNGRGYLVVCEYDPRGNYEGERPF 186
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 340 GENLYWYMTSNKNHKINPDSALESWFNEHENYKFAPLKSSDFQKTGKKQIAHYTQM 507
GEN++W+ + +P+ + WF E NY +K++ K HYTQM
Sbjct: 100 GENIFWH---RRKKTWSPEKVVTRWFEERFNY---DVKTNTC--APGKMCGHYTQM 147
>At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protein
contains similarity to SP|Q41495 STS14 protein precursor
{Solanum tuberosum}; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 185
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W +S +GCA T + + +C Y P GN +G PY
Sbjct: 148 WRNSKELGCAQATC--TKESTVLTICFYNPPGNVIGQKPY 185
>At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1)
identical to GB:M90508 SP|P33154
Length = 161
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W S R+GCA + CNY P GNY+ PY
Sbjct: 125 WRKSVRLGCAKVRCNNG---GTIISCNYDPRGNYVNEKPY 161
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W +S R+GCA + CNY P GNY PY
Sbjct: 125 WRNSVRLGCAKVRCNNG---GTIISCNYDPPGNYANQKPY 161
>At4g33710.1 68417.m04787 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 166
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 510 WSDSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPY 629
W +S+ VGCA FV CNY GN G PY
Sbjct: 130 WKNSEWVGCA---KVKCDNGGTFVTCNYSHPGNVRGRRPY 166
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 391 PDSALESWFNEHENYKFAPLKSSDFQKTGKKQIAHYT 501
P SALE+WF E+E + SS +TG +YT
Sbjct: 746 PGSALEAWFKENEQEEEEEHVSSSEHRTGVVSYDNYT 782
>At2g44460.1 68415.m05528 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 582
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 298 HNPDRSIASERFSTGENLYWYMTSNKNHKINP 393
H P A RF T L W +T++ NH+ P
Sbjct: 347 HIPQADPARPRFVTDHQLQWRVTNHSNHQFGP 378
>At5g27840.2 68418.m03338 serine/threonine protein phosphatase PP1
isozyme 8 (TOPP8) identical to SP|O82734
Serine/threonine protein phosphatase PP1 isozyme 8 (EC
3.1.3.16) {Arabidopsis thaliana}
Length = 324
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 474 WEKADRPLHSDGWSDSDR-VGCAIGTSRTAQ 563
W D+ + +GW+DSDR + C G + A+
Sbjct: 208 WSDPDQKI--EGWADSDRGISCTFGADKVAE 236
>At5g27840.1 68418.m03337 serine/threonine protein phosphatase PP1
isozyme 8 (TOPP8) identical to SP|O82734
Serine/threonine protein phosphatase PP1 isozyme 8 (EC
3.1.3.16) {Arabidopsis thaliana}
Length = 318
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 474 WEKADRPLHSDGWSDSDR-VGCAIGTSRTAQ 563
W D+ + +GW+DSDR + C G + A+
Sbjct: 208 WSDPDQKI--EGWADSDRGISCTFGADKVAE 236
>At4g31540.1 68417.m04478 exocyst subunit EXO70 family protein
(EXO70-G1) tomato leucine zipper-containing protein -
Lycopersicon esculentum, PIR2:S21495; contains Pfam
domain PF03081: Exo70 exocyst complex subunit;
Length = 687
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 304 PDRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHENYK 438
PD+++A G N +W++ N D +SW EH+ YK
Sbjct: 495 PDQTLAH---FFGMNNHWHLYKNLKGTNIGDHLGDSWLKEHDQYK 536
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 356 QYKFSPVENLSDAMLLSGLWKSLSD 282
++ F+PVE + + LS L++SLSD
Sbjct: 238 KFSFTPVETICGRLCLSVLYRSLSD 262
>At1g74420.2 68414.m08622 xyloglucan fucosyltransferase, putative
(FUT3) identical to SP|Q9CA71 Probable
fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 525
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 326 SDAMLLSGLWKSLSDEAH 273
SDA++++GLW SL + AH
Sbjct: 465 SDALVVTGLWSSLVEVAH 482
>At1g74420.1 68414.m08621 xyloglucan fucosyltransferase, putative
(FUT3) identical to SP|Q9CA71 Probable
fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 493
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 326 SDAMLLSGLWKSLSDEAH 273
SDA++++GLW SL + AH
Sbjct: 433 SDALVVTGLWSSLVEVAH 450
>At1g50780.1 68414.m05711 hypothetical protein weak similarity to
aldehyde oxidase [Arabidopsis thaliana] GI:3172025
Length = 323
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 573 FFVVCNYGPAGNYLGNIPYKSGEPSNRLVCGAGDC 677
+ + Y N++G + Y++ S +L CG G C
Sbjct: 16 YLISIPYSDVNNFVGVLRYQTSFKSVKLSCGEGGC 50
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,751,251
Number of Sequences: 28952
Number of extensions: 368716
Number of successful extensions: 1033
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -