Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0069
(737 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containi... 36 0.028
At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containi... 35 0.049
At5g16420.1 68418.m01919 pentatricopeptide (PPR) repeat-containi... 34 0.11
At1g79080.1 68414.m09220 pentatricopeptide (PPR) repeat-containi... 34 0.11
At5g21222.1 68418.m02532 protein kinase family protein contains ... 33 0.15
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.15
At5g25630.1 68418.m03050 pentatricopeptide (PPR) repeat-containi... 32 0.46
At4g11690.1 68417.m01867 pentatricopeptide (PPR) repeat-containi... 32 0.46
At4g20740.1 68417.m03014 pentatricopeptide (PPR) repeat-containi... 31 0.60
At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containi... 31 0.80
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 31 0.80
At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containi... 31 1.1
At1g13040.1 68414.m01512 pentatricopeptide (PPR) repeat-containi... 31 1.1
At4g28580.1 68417.m04088 magnesium transporter CorA-like family ... 30 1.4
At1g71060.1 68414.m08201 pentatricopeptide (PPR) repeat-containi... 30 1.4
At1g19290.1 68414.m02398 pentatricopeptide (PPR) repeat-containi... 30 1.4
At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containi... 30 1.8
At5g61990.1 68418.m07780 pentatricopeptide (PPR) repeat-containi... 29 2.4
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 29 3.2
At5g06400.1 68418.m00716 pentatricopeptide (PPR) repeat-containi... 29 3.2
At4g13070.1 68417.m02038 group II intron splicing factor CRS1-re... 29 3.2
At1g53140.1 68414.m06017 dynamin family protein low similarity t... 29 3.2
At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containi... 29 4.3
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 29 4.3
At4g20090.1 68417.m02938 pentatricopeptide (PPR) repeat-containi... 29 4.3
At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containi... 29 4.3
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 29 4.3
At4g31070.1 68417.m04411 pentatricopeptide (PPR) repeat-containi... 28 5.6
At3g48810.1 68416.m05330 pentatricopeptide (PPR) repeat-containi... 28 5.6
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto... 28 7.4
At5g22550.1 68418.m02632 expressed protein contains Pfam profile... 28 7.4
At1g80150.1 68414.m09381 pentatricopeptide (PPR) repeat-containi... 28 7.4
At1g67310.1 68414.m07661 calmodulin-binding protein similar to a... 28 7.4
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 27 9.8
At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containi... 27 9.8
At5g01110.1 68418.m00015 pentatricopeptide (PPR) repeat-containi... 27 9.8
At4g28040.2 68417.m04023 nodulin MtN21 family protein similar to... 27 9.8
At4g28040.1 68417.m04022 nodulin MtN21 family protein similar to... 27 9.8
At2g01390.1 68415.m00056 pentatricopeptide (PPR) repeat-containi... 27 9.8
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 27 9.8
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 27 9.8
At1g51910.1 68414.m05851 protein kinase family protein contains ... 27 9.8
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 27 9.8
>At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 851
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +2
Query: 530 STNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISE 709
+T I+ L+KDGNL A ++ + VG +P + ++ L+++G K+ ++ + + +
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 710 N 712
N
Sbjct: 788 N 788
>At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 867
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 530 STNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISE 709
+T I+ L+KDGN+ A D+ + +++G +P + L+ L+++G K K + E
Sbjct: 734 TTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK---ASKMLEE 790
Query: 710 NTKRKVT 730
K+ VT
Sbjct: 791 MKKKDVT 797
>At5g16420.1 68418.m01919 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 535
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP + IE L K+GN+ + + VL + +E+G P L + L + G E +
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Query: 689 L 691
+
Sbjct: 492 I 492
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 240 ERTFSIDRSNIFYHLLVTYCNADETDKALGLWTLLQEESEVPSNQFLVYLGNHLKSKNR 416
ER+F D S++ ++ C + D+A GLW + + + +P N L L + L + R
Sbjct: 324 ERSFMPD-SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
>At1g79080.1 68414.m09220 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP A + + L K L +A+ V+ + G +P ++ YL+ L + GNV Q
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 689 LGKNISEN--TKRKVTYD 736
L + + ++ VTY+
Sbjct: 163 LVEKMEDHGYPSNTVTYN 180
>At5g21222.1 68418.m02532 protein kinase family protein contains
Pfam profile: PF00069 protein kinase domain
Length = 831
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP + I A + GNL QAM + K E G P ++ L+K + G +E+ +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 689 L 691
L
Sbjct: 446 L 446
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P +T I+ L K+G+L A ++L + ++G P ++ L + GN+E+ +L
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956
>At5g25630.1 68418.m03050 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 574
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
I A + GN+ A+ LLK E+G P ++ L+K G E+ +L
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172
>At4g11690.1 68417.m01867 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 566
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP+K + I+ + N+ +A+ + L E+G +P + L+ +G + + +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 689 LGKNISE 709
L K++ E
Sbjct: 465 LFKSMVE 471
>At4g20740.1 68417.m03014 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 727
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISEN 712
++ALVK+G A+ V E G + +S L+K L + G +E++ ++ + + EN
Sbjct: 235 MDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMREN 292
>At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1141
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP ST ++A K+G + QA+ + VG +P L+ + GN+ +
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291
Query: 689 LGKNI 703
LG +
Sbjct: 292 LGNEM 296
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = -1
Query: 230 SNPSKYSDFPSSTYR*QASSKRLCRACNPGVSRIRRACLSLPHSTNASTKS 78
S+PS SD S + ++SSKR R+ +PG SR R PHS ++ K+
Sbjct: 822 SSPS--SDESSDDSKRKSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQHKN 870
>At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 938
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNV----E 676
+P + I K GN+ +M + + I G +PK++ L+ A G + E
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 839
Query: 677 KIQQLGK-NISENTKRKVT 730
++++GK +S NT T
Sbjct: 840 LLKEMGKRGVSPNTSTYCT 858
>At1g13040.1 68414.m01512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 517
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
I+A +++GN + A +L + E+G P +L +L + GNV+K
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
>At4g28580.1 68417.m04088 magnesium transporter CorA-like family
protein (MRS2-6) weak similarity to SP|Q01926 RNA
splicing protein MRS2, mitochondrial precursor
{Saccharomyces cerevisiae}; contains Pfam profile
PF01544: CorA-like Mg2+ transporter protein
Length = 408
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = +3
Query: 270 IFYHLLVTYCNADETDKALGLWTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFI--IPEK 443
I + + ++ +++ D W++L E ++ SN+ L L + S + + + ++
Sbjct: 177 IAFEVFCSFVDSNVVDLETQAWSILDELTKKVSNENLKDLRSLKTSLTHLLARVQKVRDE 236
Query: 444 IEKVQSKKEDIIQKIVTPKVPQNQQRPKSPQT--SRPLLKTETWHKQWTS 587
IE KED+ +T K QNQQ + + S+P L+ T ++ TS
Sbjct: 237 IEHFLDDKEDMEDLYLTRKWIQNQQTEAASNSIVSQPNLQRHTSNRISTS 286
>At1g71060.1 68414.m08201 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 510
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 530 STNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
S+ I AL + L +A + + ++VG P ++ L + L +EG +K+ L
Sbjct: 443 SSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
>At1g19290.1 68414.m02398 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 745
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSN 628
P +T I+ LVK GN+A+AM + K IE G + S+
Sbjct: 664 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSD 702
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISE 709
I+ L K GN+ +A +L K + G P + L+ L + GNV + +L + + E
Sbjct: 638 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 694
>At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 602
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/65 (20%), Positives = 35/65 (53%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
+PT + IEA + +G + +A+ ++ + + G P +++ + +EG V++ +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 689 LGKNI 703
+ +N+
Sbjct: 285 MVRNL 289
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P +T + L K+G QA+++ K EVG P S+ + L G +KI+ L
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKIRAL 458
>At5g61990.1 68418.m07780 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 974
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
I K GN+ +A + + +E G P + LL G +EK ++L
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 616 HGAYFNRFKQDVHCLCQVSVFNKGLDVCGDFGLCWF*GTLGVTIFWIMSSFLD*TF-SIF 440
+G Y NR + + +VS+ ++ L CG GLC G +G + I+ D + S+
Sbjct: 117 NGVYVNRVRVRKSKVQEVSIDDEVLFFCGKEGLCCKDGRVGFVVQEIVFEGRDASIVSVS 176
Query: 439 SGIINGT 419
SG GT
Sbjct: 177 SGHSRGT 183
>At5g06400.1 68418.m00716 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1030
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKI 682
+ L++ G+L +A+D + E+GT P +V L+ +E +EK+
Sbjct: 861 VHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
>At4g13070.1 68417.m02038 group II intron splicing factor
CRS1-related contains weak similarity to CRS1 [Zea mays]
gi|9837550|gb|AAG00595
Length = 343
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 333 WTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFI-IPEKIEKVQSKKEDIIQKIVTPKVPQ 509
W + + N+ Y K N P + I K+EK + K+E +I+K+ VP+
Sbjct: 112 WKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPK 171
Query: 510 NQQRPKSPQT 539
+ P P++
Sbjct: 172 SPAEPYDPES 181
>At1g53140.1 68414.m06017 dynamin family protein low similarity to
dynamin-like protein E [Arabidopsis thaliana]
GI:19423872; contains Pfam profile PF00350: Dynamin
family
Length = 817
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 169 LDDACQRYVEEGKSEYLEGLLEATKELSQLIAQTSSTIYSLHTVMPMKPI-KPSDYGHC 342
L+ C R+ +E EY ++ AT + ++T + + T + KPI ++Y HC
Sbjct: 111 LEPRC-RFQDEDSEEYGSPIVSATAVADVIRSRTEALLKKTKTAVSPKPIVMRAEYAHC 168
>At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 915
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
+PT + + I L+KDG+ A + + GT P ++ ++ EG + +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 689 LGKNISEN 712
+ + EN
Sbjct: 659 MMAKMREN 666
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 390 GNHLKSKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVPQNQQRPKSPQT-SRPLLKTET 566
G + +++ +VP E+IE +++ +K+ K +N+ R + P+T R +LK +
Sbjct: 526 GGNTETETEEVPEASEEEIEAPVQEEKPQKEKVFKEKPIRNRTRGRGPETIPRAILKRKK 585
Query: 567 WHKQW 581
W
Sbjct: 586 STNYW 590
>At4g20090.1 68417.m02938 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
P T I LVK A+ +L E G ++ L+ L +EG E+ L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 692 GKNISE 709
+ ++E
Sbjct: 385 WRKMAE 390
>At4g19440.1 68417.m02860 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 825
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNV 673
P K + I +DGN+ +A +L + E G +P S K + ++G V
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK-IQQ 688
P + ++ I K+G + +A + +SI+ P + LL L +EG EK +
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 689 LGKNISENTKRKVTYD 736
I E VTY+
Sbjct: 614 FNTLIEEREVDTVTYN 629
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEK 679
PT + ++ I L G AM+ + E G +P + ++ +EG VEK
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
>At4g31070.1 68417.m04411 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 613
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQL 691
I + +DG L +AM ++ + G +PKS +V LL G+ K+ ++
Sbjct: 120 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
>At3g48810.1 68416.m05330 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVE 676
+P +T ++ GN+ +A+ V E+G P L+ A+ G+++
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
Length = 1483
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKY--LLKNLAEEGNVEK-IQQLGKNISE 709
I K G L A+ + +E G +VV Y L+ L++EGNVE+ + LGK I E
Sbjct: 761 IHGYFKGGALVDALMQDREMVEKGM--NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 818
Query: 710 NTK-RKVTY 733
+ +TY
Sbjct: 819 GVEPNLITY 827
>At5g22550.1 68418.m02632 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 443
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 160 HRRLDDACQRYVEEGKSEYLEGLLEATKE--LSQLIAQTS--STIYSLHTVMP 306
H D + +EE K YLE + TKE +SQ I T+ I+ L ++P
Sbjct: 72 HHSSDKQHLKMIEEHKKRYLEMFVSKTKENVVSQKIEYTNLKDPIFKLRWILP 124
>At1g80150.1 68414.m09381 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 397
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KP T I L K GN A + + P + V+ LLK L ++G +++
Sbjct: 314 KPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQ--- 370
Query: 689 LGKNISENTKRKV 727
K+I E R+V
Sbjct: 371 -AKSIMELVHRRV 382
>At1g67310.1 68414.m07661 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1035
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 500 STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVG 610
S++ P AE+++N+E QA+ +L + + +G
Sbjct: 218 SSTSPGVAEVNSNLEGSASSSEFGQALKMLKEQLSIG 254
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 175 DACQRYVEEGKSEYLEGLLEATKELSQLIAQTSSTIYSLHTVMPMKPIKPSD-YG 336
+ C ++E +S LE + + E ++ A IY+ +P KP++P D YG
Sbjct: 717 EKCSSILQEYQSA-LEEITDVLLEKGEIKADEIWNIYNTAPRIPQKPVRPVDEYG 770
>At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 472
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
+P S+ ++ L KDG QAM++ + G P L+ L +E +++ +
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 689 L 691
L
Sbjct: 319 L 319
>At5g01110.1 68418.m00015 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 729
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 509 KPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQ 688
KPT ++ I+ + GN + L K I G +P L+ E N+ K
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 689 LGKNISE 709
L K + E
Sbjct: 642 LVKKMEE 648
>At4g28040.2 68417.m04023 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 359
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 600 IDLSKTSIACAKFPSLTRASMFVEISAFVGFE 505
IDLS +S+ACA +L A F+ IS VGFE
Sbjct: 95 IDLSSSSMACA-MTNLIPAVTFI-ISIIVGFE 124
>At4g28040.1 68417.m04022 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 359
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 600 IDLSKTSIACAKFPSLTRASMFVEISAFVGFE 505
IDLS +S+ACA +L A F+ IS VGFE
Sbjct: 95 IDLSSSSMACA-MTNLIPAVTFI-ISIIVGFE 124
>At2g01390.1 68415.m00056 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 577
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 539 IEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNISEN 712
+E LV G +A+D+ K E+G P L+ + G + ++ + EN
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKEN 291
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 587 LLKSIEVGTMPKSNVVKYLLK--NLAEEGNVEKIQQLGKNISENTKRKV 727
+LK ++ + K + K + N EG EKI + GK I+E+ RKV
Sbjct: 492 ILKPVQKRSEGKHKIQKTFQEETNKQPEGYNEKIMETGKKINEDGTRKV 540
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 426 FIIPE--KIEKVQSKKEDIIQKIVTPKVPQNQQRPKS 530
F +PE K+E++++ E+ + + PKVP+ + KS
Sbjct: 116 FRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKS 152
>At1g51910.1 68414.m05851 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 876
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/105 (23%), Positives = 46/105 (43%)
Frame = +2
Query: 392 KPFEIKEQRCTVYNSGKNRKSSVQKGRHNPKNCHT*STSKPTKAEISTNIEALVKDGNLA 571
K +I+E T YN G+ +SS++ P N + S PT S
Sbjct: 287 KANDIREFNIT-YNGGQVWESSIR-----PHNLSITTISSPTALNSSDGFFNFTFTMTTT 340
Query: 572 QAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLGKNIS 706
+ L+ ++EV T+ ++ +++ ++ N++K L K IS
Sbjct: 341 STLPPLINALEVYTLVENLLLETYQDEVSAMMNIKKTYGLSKKIS 385
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 HLKSKNRDVPFIIPEKIEKVQSKKEDIIQKI-VTPKVPQNQQRPKSP 533
H S+ +D+ +I K+E+ + KKE ++ ++P P + P +P
Sbjct: 187 HQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPSPSPSRLPPTP 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,844,760
Number of Sequences: 28952
Number of extensions: 337361
Number of successful extensions: 1389
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -