Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0050
         (718 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g12100.1 68415.m01300 Ulp1 protease family protein contains P...    31   0.76 
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to...    31   0.76 
At5g28480.1 68418.m03462 hypothetical protein                          30   1.8  
At3g56510.1 68416.m06284 TBP-binding protein, putative similar t...    28   7.1  

>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At5g28270, At2g05450,
           At1g45090, At2g16180, At2g06750
          Length = 1224

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -3

Query: 116 IEKCFRKKRFLPRRSGRALENARPQKQACGAFPLKTV 6
           ++K  + ++F+PRRS R   N  P+K A G+ P++ V
Sbjct: 584 VKKSTKPRKFVPRRSSRL--NNTPKKAATGSLPVEEV 618


>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
           At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
           contains Pfam profile PF02902: Ulp1 protease family,
           C-terminal catalytic domain
          Length = 1210

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -3

Query: 116 IEKCFRKKRFLPRRSGRALENARPQKQACGAFPLKTV 6
           ++K  + ++F+PRRS R   N  P+K A G+ P++ V
Sbjct: 575 VKKSTKPRKFVPRRSSRL--NNTPKKAATGSLPVEEV 609


>At5g28480.1 68418.m03462 hypothetical protein
          Length = 1230

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -3

Query: 116 IEKCFRKKRFLPRRSGRALENARPQKQACGAFPLK 12
           ++K  + ++F+PRRS R   N  P+K A G+ P++
Sbjct: 571 VKKSTKPRKFVPRRSSRL--NNTPKKAATGSLPVE 603


>At3g56510.1 68416.m06284 TBP-binding protein, putative similar to
           TBP-binding protein ABT1 GI:6518527 from [Mus musculus]
          Length = 257

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 162 SLKYDSWNANYLSARRCSELTSELIIK 242
           S+ YD WN  YL+  +  +LT E+  K
Sbjct: 135 SVYYDIWNIKYLTKFKWDDLTEEIAYK 161


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,459,478
Number of Sequences: 28952
Number of extensions: 277983
Number of successful extensions: 551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)