Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0038
         (405 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identic...    28   2.1  
At3g45800.1 68416.m04957 hypothetical protein                          28   2.1  
At3g20500.1 68416.m02596 calcineurin-like phosphoesterase family...    27   3.6  
At5g11020.1 68418.m01287 protein kinase family protein contains ...    27   6.3  
At4g17540.1 68417.m02623 expressed protein                             27   6.3  
At2g11620.1 68415.m01249 hypothetical protein                          27   6.3  
At3g44200.1 68416.m04739 protein kinase family protein contains ...    26   8.3  

>At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identical
           to purple acid phosphatase (PAP22)GI:20257494 from
           [Arabidopsis thaliana]
          Length = 434

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 257 AXVDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDGSETXARAL 394
           A VD  F    H++ +  RV   +A  C P H+ + DG      AL
Sbjct: 320 ARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLAL 365


>At3g45800.1 68416.m04957 hypothetical protein
          Length = 563

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 186 LREEDGTMCSSGDWMXPRRPPNCLRGSTKPSPQL 287
           LR +       G+ M P +PP  L G  +P PQ+
Sbjct: 444 LRYDGNNNGLQGELMKPEKPPQDLYGQCQPQPQI 477


>At3g20500.1 68416.m02596 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 437

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 230 AAAPPTKLPAXVDEAFPTADHSHSKGSRVRGAQAALCQPEHVHVCDG 370
           A   P    + VD  F    H++ +  RV   ++  C P H+ + DG
Sbjct: 310 AEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDG 356


>At5g11020.1 68418.m01287 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 372

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +2

Query: 170 RPSPKTT*GRRHNVLKWRLDAAAPPTKLPAXVDEAFPTADHSHSKGSRVRGAQAALC-QP 346
           +P  K   G   +++ W +      TKLP+ +D A    D    K      A A LC QP
Sbjct: 277 KPVEKLAPGECQSIITWAMPYLTDRTKLPSVIDPAI--KDTMDLKHLYQVAAVAILCVQP 334

Query: 347 E 349
           E
Sbjct: 335 E 335


>At4g17540.1 68417.m02623 expressed protein
          Length = 294

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 373 GAVAHVHVLRLAQSSLRSTNARTFGVRVVSCGEGFVD 263
           G   HV      ++S  STN+RTFG R       F+D
Sbjct: 166 GHKKHVDTKASLKNSGSSTNSRTFGTRTEKVINSFLD 202


>At2g11620.1 68415.m01249 hypothetical protein 
          Length = 491

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 186 LREEDGTMCSSGDWMXPRRPPNCLRGSTKPSPQL 287
           LR +       G  M P +PP  L G  +P PQ+
Sbjct: 254 LRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQI 287


>At3g44200.1 68416.m04739 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains
           serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 941

 Score = 26.2 bits (55), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 157 MLHFKAIPEDYVRKTAQCAQVAIGCXRAAHQ 249
           ++H KA  + YV K  + A+    C R+AHQ
Sbjct: 24  LVHHKAERKKYVLKKIRLARQTERCRRSAHQ 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,570,065
Number of Sequences: 28952
Number of extensions: 124411
Number of successful extensions: 312
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 595686720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)