Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0108
(636 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38910.1 68415.m04783 calcium-dependent protein kinase, putat... 34 0.091
At2g40070.1 68415.m04923 expressed protein 33 0.12
At5g28900.1 68418.m03562 calcium-binding EF hand family protein ... 32 0.28
At5g28850.2 68418.m03550 calcium-binding EF hand family protein ... 32 0.28
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 32 0.28
At1g22870.1 68414.m02855 protein kinase family protein contains ... 31 0.64
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain... 31 0.85
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative... 30 1.1
At2g20180.2 68415.m02360 basic helix-loop-helix (bHLH) family pr... 30 1.1
At2g20180.1 68415.m02359 basic helix-loop-helix (bHLH) family pr... 30 1.1
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 30 1.1
At5g44200.1 68418.m05408 nuclear cap-binding protein, putative s... 30 1.5
At1g54450.1 68414.m06211 calcium-binding EF-hand family protein ... 30 1.5
At5g19470.1 68418.m02320 MutT/nudix family protein similar to SP... 29 2.0
At3g03000.1 68416.m00295 calmodulin, putative similar to calmodu... 29 2.0
At2g07715.1 68415.m00965 ribosomal protein L2, putative similar ... 29 2.0
At5g04870.1 68418.m00510 calcium-dependent protein kinase isofor... 29 2.6
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 29 2.6
At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD) i... 29 3.4
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 29 3.4
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 28 4.5
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 28 4.5
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 28 6.0
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 6.0
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 6.0
At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonu... 28 6.0
At5g56170.1 68418.m07007 expressed protein contains similarity t... 27 7.9
At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR... 27 7.9
At4g26480.1 68417.m03810 KH domain-containing protein qkI-7, Mus... 27 7.9
At3g47820.1 68416.m05211 armadillo/beta-catenin repeat family pr... 27 7.9
At3g22930.1 68416.m02889 calmodulin, putative strong similarity ... 27 7.9
At2g34020.1 68415.m04165 calcium-binding EF hand family protein ... 27 7.9
>At2g38910.1 68415.m04783 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase, isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 583
Score = 33.9 bits (74), Expect = 0.091
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 382 LTDLFRKMDKDNNGLIPRNEFIDGIVNTKF 471
L D+ R++DKDN+G I +EF+D + +T F
Sbjct: 546 LDDILREVDKDNDGRIDYSEFVDMMQDTGF 575
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 629 TSS*ILSASVGGPRRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPAGDVSNLVLTMP 450
TSS LS+S G RR + SGG + + P ++T+ + R +P + T P
Sbjct: 161 TSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRP 220
Query: 449 SMNS 438
S+ +
Sbjct: 221 SLTN 224
>At5g28900.1 68418.m03562 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand
Length = 536
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 385 TDLFRKMDKDNNGLIPRNEFIDGIVN 462
T LFRK+D +N G + R+ FID VN
Sbjct: 180 TSLFRKIDLNNTGFVTRDAFIDFWVN 205
>At5g28850.2 68418.m03550 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand
Length = 536
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 385 TDLFRKMDKDNNGLIPRNEFIDGIVN 462
T LFRK+D +N G + R+ FID VN
Sbjct: 180 TSLFRKIDLNNTGFVTRDAFIDFWVN 205
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 583 PPSQGEAPQ*TPSQSMRPLPFLSKQIRHGAHLQPG 479
PPSQ + Q TP +P P Q R G+HL G
Sbjct: 160 PPSQQQQQQSTPQHQQQPTPQQQPQRRDGSHLANG 194
>At1g22870.1 68414.m02855 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 913
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 593 PRRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPAGDVSNLVLTMPSMNS 438
P + T+ SAA NS DE +P + PR P PA T+ S +S
Sbjct: 645 PTKKTEKVASAAKNSPAWDEDWALPTKISAPRDPGPANSPQFNNSTVQSQSS 696
>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 1322
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -2
Query: 590 RRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPAGDVSNLVLTMPSM 444
+R++ SG +++ PV + V ++ RRP+PA + L + +PS+
Sbjct: 572 KRASSSGRESSVTFLPVIDKCGVLLKLQQIRRPNPAYPSTRLAVRLPSL 620
>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
strong similarity to gi:4467359
Length = 1116
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 55 RDRSVSP-DYYGSRRFSRISPGRETPDRNLPHYGPRFP 165
RDRSV + +GS+++ PG P N P P P
Sbjct: 501 RDRSVEDSELFGSKKYKEKCPGSPKPQNNTPSKKPPLP 538
>At2g20180.2 68415.m02360 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 478
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 17 KELLGAAPSTTCTGTARSRPTTTDLEDSVVSALDGRRQIGTCPTTDPDSRRREAKVQSRS 196
K + AP+ TGT+ S + +++E + D +R+ TTD R E Q+R
Sbjct: 216 KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARV 275
Query: 197 S 199
S
Sbjct: 276 S 276
>At2g20180.1 68415.m02359 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 407
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 17 KELLGAAPSTTCTGTARSRPTTTDLEDSVVSALDGRRQIGTCPTTDPDSRRREAKVQSRS 196
K + AP+ TGT+ S + +++E + D +R+ TTD R E Q+R
Sbjct: 145 KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARV 204
Query: 197 S 199
S
Sbjct: 205 S 205
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Frame = +1
Query: 211 VKQLWDR---WRNV-WLLAWERQRRLHERLAHLKELQRVSNFSWD-DWRK------RFLK 357
V QL+D W + +L+ W+ Q LH + L +LQ +S F ++ K R+
Sbjct: 449 VSQLFDTEPDWNEMEFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRT 508
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGD 492
++ ++ + D+ ++MD D +I +N ++ I+ + GD
Sbjct: 509 ALSREEIEVNDVSKEMDLD---IIKQNSQVERIIADRISKDGLGD 550
>At5g44200.1 68418.m05408 nuclear cap-binding protein, putative
similar to SP|P52298 20 kDa nuclear cap binding protein
(CBP20) (NCBP interacting protein 1) {Homo sapiens};
non-consensus AT donor splice site at exon 4, AC
acceptor splice site at exon 5; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 257
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 EGTPGRGSQHDLHRDRSVSPDYYG---SRRFSRISPGRETPDRNLPHYGPRFPPKGSKGA 186
+G R + D HR R D YG SRR + R+T P PRF G
Sbjct: 188 QGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFRESGDSDD 247
Query: 187 EPE 195
+ E
Sbjct: 248 DGE 250
>At1g54450.1 68414.m06211 calcium-binding EF-hand family protein
contains Pfam profile: PF00036 EF hand
Length = 535
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 385 TDLFRKMDKDNNGLIPRNEFID 450
T +F+K+D +N G + R +FID
Sbjct: 180 TSIFKKVDTNNTGFVKREDFID 201
>At5g19470.1 68418.m02320 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 365
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 RQRRLH-ERLAHLKELQRVSNFSWDDWRKRFLK-FMNHKKSRLTDLFRKMDKDNNGLIPR 435
R LH R+ ++ + +F+W+D + K ++ S LT K+D+ N GL
Sbjct: 34 RSPPLHISRVLSVETVPLSPSFTWNDVFENSRKEYVPQNSSDLTGFLEKVDRCNRGLEKL 93
Query: 436 NEFIDGIV 459
EFI ++
Sbjct: 94 GEFIPFVI 101
>At3g03000.1 68416.m00295 calmodulin, putative similar to calmodulin
SP:P04352 from [Chlamydomonas reinhardtii]; contains
Pfam profile: PF00036 EF hand (4 copies)
Length = 165
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 382 LTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTS 480
LT + ++ D+D +G I EF+ I + FD +
Sbjct: 131 LTGMIKEADRDGDGCIDFQEFVQAITSAAFDNA 163
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 373 KSRLTDLFRKMDKDNNGLIPRNEFI 447
+ +L L +K D++NNGL+ +EF+
Sbjct: 54 QDQLDTLIQKADRNNNGLVEFSEFV 78
>At2g07715.1 68415.m00965 ribosomal protein L2, putative similar to
ribosomal protein L2 [Gossypium arboreum] GI:17933133;
contains Pfam profile PF00181: Ribosomal Proteins L2,
RNA binding domain
Length = 307
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Frame = +1
Query: 97 FSRISPGRETPDRNLPH-YGPRFPPKGSKGAEPEFRSPRVKQLWDRWRNVWLLAWERQRR 273
FS + RET +G FP GA+P F +PR++Q R ++ + L ++ R
Sbjct: 171 FSSLKAKRETASLAFASSFG--FPRIAVAGAKPAFFAPRMRQK-VRGKSTFSLCEVQKGR 227
Query: 274 LHERL-AHLKELQRVSNFSWDDWRKR----FLKFMNHKKSR 381
H L AH ++ + SW +R++ + HKKS+
Sbjct: 228 THSILWAH--RIKGKAGLSWQSFRRQDTLGLVGAAGHKKSK 266
>At5g04870.1 68418.m00510 calcium-dependent protein kinase isoform
AK1 (AK1) identical to calcium-dependent protein kinase,
isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 610
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 379 RLTDLFRKMDKDNNGLIPRNEFI 447
R+ +L R +D+DN+G I NEF+
Sbjct: 561 RIEELMRDVDQDNDGRIDYNEFV 583
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 364 NHKKSRLTDLFRKMDKDNNGLIPRNEFI 447
N K+S + DL + D DN+G I EFI
Sbjct: 486 NLKESEILDLMQAADVDNSGTIDYKEFI 513
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 273 PPLALPGEQPHVAPPVPQLLH-AGRPELRLCTFASLRRESGSVVGQVPIWRLPS 115
PP+ P H APPVP++ +G P FA L+ + +W PS
Sbjct: 252 PPVVDPPPATHRAPPVPRIPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPPS 305
>At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD)
identical to Homeobox protein LUMINIDEPENDENS
(Swiss-Prot:Q38796) [Arabidopsis thaliana]
Length = 953
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 602 VGGPRRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPS-PAGDVSNLVLTMPSMNS 438
V GP G +A+ A VPV+ D ++PS P +S+ V M M+S
Sbjct: 518 VNGPLAVQPVNGPSALQPVNGPSAVIVPVQADEIKKPSTPPKSISSKVGVMMKMSS 573
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 364 NHKKSRLTDLFRKMDKDNNGLIPRNEFI 447
N K+S + DL + D DN+G I EFI
Sbjct: 522 NLKESEILDLMQAADVDNSGTIDYKEFI 549
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 169 KGSKGAEPEFRSPRVKQLWDR--WRNVWLLAWERQR 270
+G AE +FR VK+LW R +R+ LL ERQ+
Sbjct: 695 RGFSEAEIQFRLGNVKELWQRFLFRDSILLEAERQK 730
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 169 KGSKGAEPEFRSPRVKQLWDR--WRNVWLLAWERQR 270
+G AE +FR VK+LW R +R+ LL ERQ+
Sbjct: 697 RGFSEAEIQFRLGNVKELWQRFLFRDSILLEAERQK 732
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 617 ILSASVGGPR-RSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPAGD 477
++ AS GGP +GG +SF D P+ DPP + GD
Sbjct: 1318 VVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGD 1365
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 635 RFTSS*ILSASVGGPRRSTQSGGSA-AMNSFPVDEAATVPVETDPPRRPSP 486
R S I SV PR S+ G S A++S P A P D PR PSP
Sbjct: 184 RVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPT-LDTPRPPSP 233
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 635 RFTSS*ILSASVGGPRRSTQSGGSA-AMNSFPVDEAATVPVETDPPRRPSP 486
R S I SV PR S+ G S A++S P A P D PR PSP
Sbjct: 183 RVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPT-LDTPRPPSP 232
>At1g07350.1 68414.m00783 transformer serine/arginine-rich
ribonucleoprotein, putative similar to GB:Y09506 from
[Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269
(1997))
Length = 382
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 22 TPGRGSQHDLHRDRSVSPDYYGSRRFSRISPGRETPDRNLPHYGPRFPPKGSKGAEPEFR 201
+P +++ RDRS SP Y R S DR+ P+Y R+ + S+ P +R
Sbjct: 231 SPSPDDRYNRRRDRSYSPYYRRRDRSRSYSRNCRARDRS-PYYMRRYRSR-SRSYSPRYR 288
Query: 202 S 204
+
Sbjct: 289 A 289
>At5g56170.1 68418.m07007 expressed protein contains similarity to
GPI-anchored protein
Length = 168
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 151 GPRFPPKGSKGAEPEFRSPRVKQLWD 228
GP++PPK GA +F P QL D
Sbjct: 67 GPKYPPKECCGAFKDFACPYTDQLND 92
>At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1165
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = -2
Query: 359 NLRNLFLQSSQLKLETR*SSLRWARRSCSLRWRSQASSHTLRHRSHSCFTRGDLNSGSAP 180
N+R +FL S++K+ET + + +LR+ +SH H C T +N
Sbjct: 556 NVRGIFLDLSEVKVETSLDREHF-KNMRNLRYLKLYNSHC----PHECLTNNKINMPDGL 610
Query: 179 LLPFGGNRGP*WGRF 135
LP R W +F
Sbjct: 611 ELPLKEVRCLHWLKF 625
>At4g26480.1 68417.m03810 KH domain-containing protein qkI-7, Mus
musculus
Length = 555
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 10 RHEGTPGRGSQHDLHRDRSVSPDYYGSRRFSRISPGR 120
++E G S + L + R PD + R +R PG+
Sbjct: 200 KYEWCTGTRSLNSLKKTRQTEPDQFNKREINRSGPGQ 236
>At3g47820.1 68416.m05211 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 509
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 430 PRNEFIDGIVNTKFDTSPAGDGRR 501
P +++G+V T+ D+ P G G R
Sbjct: 88 PDYAYVEGVVRTRMDSLPPGSGHR 111
>At3g22930.1 68416.m02889 calmodulin, putative strong similarity to
calmodulin 8 GI:5825600 from [Arabidopsis thaliana];
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 173
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 364 NHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDT 477
N + L D+ ++D D NG I +EF++ + N +T
Sbjct: 66 NPTEQELQDMITEIDSDGNGTIEFSEFLNLMANQLQET 103
>At2g34020.1 68415.m04165 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 462
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 391 LFRKMDKDNNGLIPRNEFIDGIV 459
L + DKD NG + NEF +GI+
Sbjct: 293 LLAEFDKDKNGELDENEFEEGIM 315
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,939,735
Number of Sequences: 28952
Number of extensions: 310681
Number of successful extensions: 1286
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -