Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d11
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30940.1 68417.m04393 potassium channel tetramerisation domai... 54 7e-08
At3g09030.1 68416.m01059 potassium channel tetramerisation domai... 53 2e-07
At2g24240.1 68415.m02895 potassium channel tetramerisation domai... 53 2e-07
At5g55000.2 68418.m06850 potassium channel tetramerisation domai... 51 7e-07
At5g55000.1 68418.m06849 potassium channel tetramerisation domai... 51 7e-07
At5g41330.1 68418.m05023 potassium channel tetramerisation domai... 40 0.002
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 33 0.19
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 29 2.4
At2g27820.1 68415.m03373 prephenate dehydratase family protein 29 3.1
At1g80630.1 68414.m09462 leucine-rich repeat family protein 29 3.1
At3g07130.1 68416.m00849 serine/threonine protein phosphatase fa... 27 7.2
At1g33950.1 68414.m04208 avirulence-responsive family protein / ... 27 7.2
At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative... 27 7.2
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 27 9.5
At1g08250.1 68414.m00910 prephenate dehydratase family protein c... 27 9.5
>At4g30940.1 68417.m04393 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 54.0 bits (124), Expect = 7e-08
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 82 SKQWVKLNVGGTYFLTTKTTLCR-DPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFS 258
S +K NVGG F TT TTL +SF L E+ +L + G IDR+P F+
Sbjct: 4 SNDRIKFNVGGRIFETTATTLANAGRDSFFGALFDENWNL----SQPGDLFIDRNPDCFA 59
Query: 259 PVLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVK 375
+L+ LR G L I +I E + +EA FY + + +R K
Sbjct: 60 VLLDLLRTGDLNIPPNIPERLLHKEAMFYGLIDHLRTAK 98
>At3g09030.1 68416.m01059 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 460
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 94 VKLNVGGTYFLTTKTTLCRD-PNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 270
VKLNVGG F T +T+ P+S L L S + IDRDP F+ +LN
Sbjct: 10 VKLNVGGEIFETNASTIQSSCPDSLLAALSTSTSH------GSNPVFIDRDPEIFAVILN 63
Query: 271 YLRHGKLVINND--IAEEGVLEEAEFYNITELIRL 369
LR G+L N+ +++ +L+EA +Y + L+RL
Sbjct: 64 LLRTGRLPANSSGVFSKQELLDEAMYYGVESLLRL 98
>At2g24240.1 68415.m02895 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 441
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/116 (31%), Positives = 57/116 (49%)
Frame = +1
Query: 82 SKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSP 261
SK +K NVGG F TT TTL + + +D +S +++ + +DR+ F+
Sbjct: 4 SKDRIKFNVGGRLFETTATTLANAGRDSFFGALFDDEWNLSPLEDSILF-VDRNSDCFAV 62
Query: 262 VLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHV 429
+L+ LR G L + +I E + EA FY + + +R K R L DS K +
Sbjct: 63 LLDLLRTGDLNVPANIPERLLHREASFYGLLDHVRTAKWGPFDGNRLRLSDSVKGI 118
>At5g55000.2 68418.m06850 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 298
Score = 50.8 bits (116), Expect = 7e-07
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 94 VKLNVGGTYFLTTKTTLC-RDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 270
V+LN+GG F TT TL R+P+S L + + + + G IDRD +F +LN
Sbjct: 11 VRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAMCQE-SKKGYVFIDRDGKHFRHILN 69
Query: 271 YLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKE 378
+LR G + +D +L EA++Y + L +K+
Sbjct: 70 WLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKD 105
>At5g55000.1 68418.m06849 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 290
Score = 50.8 bits (116), Expect = 7e-07
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 94 VKLNVGGTYFLTTKTTLC-RDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLN 270
V+LN+GG F TT TL R+P+S L + + + + G IDRD +F +LN
Sbjct: 11 VRLNIGGKKFCTTIDTLTIREPDSMLAAMFSGRHAMCQE-SKKGYVFIDRDGKHFRHILN 69
Query: 271 YLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKE 378
+LR G + +D +L EA++Y + L +K+
Sbjct: 70 WLRDGVIPSLSDPDCSELLREADYYQLLGLKDGIKD 105
>At5g41330.1 68418.m05023 potassium channel tetramerisation
domain-containing protein contains Pfam profile PF02214:
K+ channel tetramerisation domain
Length = 458
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 94 VKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDRDPTYFSPVLNY 273
V +NVGG F TTK TL L DS L ET + +DRDP FS +L
Sbjct: 13 VSINVGGRIFQTTKQTL---------SLAGTDSLLSQLATETTRF-VDRDPDLFSVLLYI 62
Query: 274 LRHGKLVINNDIAE-EGVLEEAEFYNITELI 363
LR G L + + +++E+ +Y I +
Sbjct: 63 LRTGNLPARSRAFDVRDLIDESRYYGIESFL 93
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 22 IDCSDFMEENIQKFNNERRSSKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDL 198
I +D+M N+QK N + S W K++ G LT++ + L R + E+S +
Sbjct: 369 IATTDYMPPNLQKQNEQDFSESDWEKIDNGSRSGLTSRGSFSSTSQLLLQRKLFEESQV 427
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 184 EDSDLISDRDETGAYLIDRDPTYFSPVLNYLRHGKLVI 297
ED D + D D+ YL D + YF+ LN + +L I
Sbjct: 212 EDEDDLEDEDDERRYLDDHENPYFTMTLNPKKKSQLHI 249
>At2g27820.1 68415.m03373 prephenate dehydratase family protein
Length = 424
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 304 DIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDS 417
+I E+G+ ++A N+T + L +E I R RP K S
Sbjct: 278 EILEDGIQDDAS--NVTRFVMLAREPIIPRTDRPFKTS 313
>At1g80630.1 68414.m09462 leucine-rich repeat family protein
Length = 578
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 85 KQWVKLNVGGTYFLTTKTTLCRDPNSFLYR-LVQEDSDLIS 204
K +K+N+ G F+T K+ + N L R ++ D D IS
Sbjct: 163 KGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFIS 203
>At3g07130.1 68416.m00849 serine/threonine protein phosphatase
family protein contains similarity to purple acid
phosphatase [Arabidopsis thaliana]
gi|20257489|gb|AAM15914
Length = 532
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +1
Query: 61 FNNERRSSKQWVKLNVGGTYFLTTKTTLCRDPNSFLYRLVQEDSDLISDRDETGAYLIDR 240
FN SS + N GG +F+ + D ++ Y +++D + DR T +
Sbjct: 300 FNESGSSSTLYYSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKV-DRSVTPWLVASW 358
Query: 241 DPTYFSPVLNYLRHGK 288
P ++S + R +
Sbjct: 359 HPPWYSSYTAHYREAE 374
>At1g33950.1 68414.m04208 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana), NTGP4
GB:AAD09518 (Nicotiana tabacum); contains Pfam profile:
PF00735 cell division protein (members of this family
bind GTP)
Length = 311
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 193 DLISDRDETGAYLIDRD-PTYFSPVLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRL 369
D++ + ET + RD PT+ V+ + K+VI+N +EG E + + + L+
Sbjct: 145 DVLEECKETLEDYLGRDCPTFIKEVMRMSSNRKVVIDNKTHDEGKKAE-QVHKLLSLVDD 203
Query: 370 VKERIC 387
++ C
Sbjct: 204 IRRSKC 209
>At1g26320.1 68414.m03210 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana; similar
to allyl alcohol dehydrogenase GI:9758497 from
[Arabidopsis thaliana]
Length = 351
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 235 DRDPTYFSPVLNYLRHGKLVINNDIAE 315
D+ P + VL Y+R GK+ DIAE
Sbjct: 297 DKYPKFLDFVLPYIREGKITYVEDIAE 323
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 256 KNMSGLYLLNKRQSHPCLISSHYPLELIDTKMN*DPYIE 140
+N++G L R + P +HYPL+ + T++ D +IE
Sbjct: 1265 RNINGAIKLLHRHA-PLFTRNHYPLDSVATRVLGDEFIE 1302
>At1g08250.1 68414.m00910 prephenate dehydratase family protein
contains similarity to prephenate dehydratase GI:1008717
from [Amycolatopsis methanolica]
Length = 413
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 304 DIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDS 417
+I E+G+ ++ N+T + L +E I R RP K S
Sbjct: 273 EILEDGIQDDVS--NVTRFVMLAREPIIPRTDRPFKTS 308
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,601,239
Number of Sequences: 28952
Number of extensions: 249686
Number of successful extensions: 650
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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