Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b10
         (712 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g59830.2 68418.m07502 expressed protein                             28   5.3  
At5g59830.1 68418.m07501 expressed protein                             28   5.3  
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR...    28   5.3  
At5g49340.1 68418.m06105 expressed protein similar to unknown pr...    28   7.0  
At1g09930.1 68414.m01117 oligopeptide transporter OPT family pro...    28   7.0  
At4g10640.1 68417.m01738 calmodulin-binding family protein conta...    27   9.3  
At1g51440.1 68414.m05790 lipase class 3 family protein similar t...    27   9.3  

>At5g59830.2 68418.m07502 expressed protein
          Length = 425

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 101 FVNCHSSYFFI-HLGSKTRTHPNN*IYFSKSQT 6
           F    ++Y F  H G KT+ HPNN IYF   +T
Sbjct: 336 FTKVLNAYAFERHAGCKTK-HPNNHIYFENGKT 367


>At5g59830.1 68418.m07501 expressed protein
          Length = 425

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 101 FVNCHSSYFFI-HLGSKTRTHPNN*IYFSKSQT 6
           F    ++Y F  H G KT+ HPNN IYF   +T
Sbjct: 336 FTKVLNAYAFERHAGCKTK-HPNNHIYFENGKT 367


>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1188

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 544 FFRFPEDSSLRQIWTDLTGRNNWTPTDFSYICIPHFSVDCFKLD 675
           F +  E   L   + DL G     P D  ++C   FS++CF ++
Sbjct: 547 FAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPIN 590


>At5g49340.1 68418.m06105 expressed protein similar to unknown
           protein (emb|CAB82953.1)
          Length = 457

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -3

Query: 539 IESIFLQSSHPSTAQVFVIPM-SVSAFCFNSGATFAIGVGFVLLSLKSAKLS 387
           ++++FL + HPST Q+F+  +  +S F  +S +        ++ S  S  L+
Sbjct: 4   LKNLFLITKHPSTTQIFLTSLFFLSLFLLSSSSLSDFSPSLIVSSFTSRLLT 55


>At1g09930.1 68414.m01117 oligopeptide transporter OPT family
           protein similar to SP|P40900 Sexual differentiation
           process protein isp4 {Schizosaccharomyces pombe};
           contains Pfam profile PF03169: OPT oligopeptide
           transporter protein
          Length = 734

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = -3

Query: 458 FNSGATFAIGVGFVLLSLKSAKLSFILYTRLIFISTEI 345
           F SG  +A+G+  ++++    K+SF L + ++ I+T+I
Sbjct: 128 FGSGTAYAVGIVDIIMAFYKRKISF-LASWILVITTQI 164


>At4g10640.1 68417.m01738 calmodulin-binding family protein contains
           IQ calmodulin-binding motif, Pfam:PF00612
          Length = 423

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 645 WYANIGKICWSPIISAREVCPYLSET*VLRKPKK 544
           W+  + KI WSP   + +   +  ET + RK KK
Sbjct: 9   WFTAVKKILWSPSKDSDKKTHHHKETDIKRKEKK 42


>At1g51440.1 68414.m05790 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706, lipase [Dianthus caryophyllus] GI:4103627;
           contains Pfam profile PF01764: Lipase
          Length = 527

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 559 EDSSLRQIWTDLTGRNNW 612
           ++ SLR+IW ++ G NNW
Sbjct: 83  KEVSLREIWREVQGCNNW 100


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,167,437
Number of Sequences: 28952
Number of extensions: 245273
Number of successful extensions: 457
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)