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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10d09
         (654 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit...   259   1e-69
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati...    52   3e-07
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati...    52   3e-07
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP...    50   1e-06
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati...    50   1e-06
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati...    50   1e-06
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria...    40   0.002
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,...    40   0.002
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria...    40   0.002
At2g43870.1 68415.m05454 polygalacturonase, putative / pectinase...    31   0.67 
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR...    30   1.5  
At4g21240.1 68417.m03071 F-box family protein contains F-box dom...    29   2.7  
At1g55390.1 68414.m06335 DC1 domain-containing protein similar t...    29   3.6  
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ...    28   4.7  
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ...    28   4.7  
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto...    28   4.7  
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa...    28   4.7  
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa...    28   6.2  
At3g01040.1 68416.m00005 glycosyl transferase family 8 protein c...    27   8.2  
At2g41820.1 68415.m05168 leucine-rich repeat transmembrane prote...    27   8.2  
At1g34480.1 68414.m04285 DC1 domain-containing protein contains ...    27   8.2  

>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
           / V-ATPase A subunit / vacuolar proton pump alpha
           subunit / V-ATPase 69 kDa subunit identical to SP|O23654
           Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
           (V-ATPase A subunit) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
           thaliana}
          Length = 623

 Score =  259 bits (635), Expect = 1e-69
 Identities = 121/194 (62%), Positives = 148/194 (76%)
 Frame = +2

Query: 71  GGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAT 250
           G L T  ++E E  +GYV  VSGPVV A+ M+G+AMYELVRVG++ L+GEIIRLEGD AT
Sbjct: 7   GKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSAT 66

Query: 251 IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGIN 430
           IQVYEET+G+TV DPVLRT KPLSVELGPGILG+IFDGIQRPLK I  ++  +YIP+G++
Sbjct: 67  IQVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVYIPRGVS 126

Query: 431 VPSLAREVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGN 610
           VP+L ++  WEF P     G  ITGGDLY  V ENTL+ H + +PP A G +TYIAPAG 
Sbjct: 127 VPALDKDCLWEFQPNKFVEGDTITGGDLYATVFENTLMNHLVALPPDAMGKITYIAPAGQ 186

Query: 611 YKVTDVVLETEFDG 652
           Y + D V+E EF G
Sbjct: 187 YSLKDTVIELEFQG 200


>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           very strong similarity to SP|P11574 Vacuolar ATP
           synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
           (Vacuolar proton pump B subunit) (V-ATPase 57 kDa
           subunit) {Arabidopsis thaliana}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 487

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 122 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 289
           V  V+GP+V  EK+ G    E+V +   +     G+++ ++G+ A +QV+E TSG+    
Sbjct: 23  VSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 82

Query: 290 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 415
             V  TG+ L   +   +LG IF+G  +P+ +   +    Y+
Sbjct: 83  TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124


>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           very strong similarity to SP|P11574 Vacuolar ATP
           synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
           (Vacuolar proton pump B subunit) (V-ATPase 57 kDa
           subunit) {Arabidopsis thaliana}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 487

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 122 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 289
           V  V+GP+V  EK+ G    E+V +   +     G+++ ++G+ A +QV+E TSG+    
Sbjct: 23  VSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 82

Query: 290 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 415
             V  TG+ L   +   +LG IF+G  +P+ +   +    Y+
Sbjct: 83  TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124


>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
           B subunit / vacuolar proton pump B subunit / V-ATPase 57
           kDa subunit identical to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}
          Length = 486

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 122 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 289
           V  V+GP+V  +K+ G    E+V +   +     G+++ ++G+ A +QV+E TSG+    
Sbjct: 22  VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81

Query: 290 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 415
             V  TG+ L   +   +LG IF+G  +P+ +   +    Y+
Sbjct: 82  TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123


>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           strong similarity to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 485

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 122 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 289
           V  V+GP+V  +K+ G    E+V +   +     G+++ ++G+ A +QV+E TSG+    
Sbjct: 22  VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81

Query: 290 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 415
             V  TG+ L   +   +LG IF+G  +P+ +   +    Y+
Sbjct: 82  TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123


>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
           / V-ATPase B subunit, putative / vacuolar proton pump B
           subunit, putative / V-ATPase 57 kDa subunit, putative
           strong similarity to SP|P11574 Vacuolar ATP synthase
           subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           {Arabidopsis thaliana}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF02874: ATP synthase alpha/beta family
           beta-barrel domain
          Length = 330

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = +2

Query: 122 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGV-TVG 289
           V  V+GP+V  +K+ G    E+V +   +     G+++ ++G+ A +QV+E TSG+    
Sbjct: 22  VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKF 81

Query: 290 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 415
             V  TG+ L   +   +LG IF+G  +P+ +   +    Y+
Sbjct: 82  TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123


>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
           identical to SP|P83484 ATP synthase beta chain 2,
           mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
           thaliana}; strong similarity to SP|P17614 ATP synthase
           beta chain, mitochondrial precursor (EC 3.6.3.14)
           {Nicotiana plumbaginifolia}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain; supporting cDNA
           gi|26452187|dbj|AK118582.1|
          Length = 556

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 269 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 442
           T G+  G  VL TG P++V +G   LG I + +  P+ +  E+    Y+P   + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198


>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
           putative strong similarity to SP|P83483 ATP synthase
           beta chain 1, mitochondrial precursor (EC 3.6.3.14)
           {Arabidopsis thaliana}, SP|P17614 ATP synthase beta
           chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
           plumbaginifolia}; contains Pfam profiles PF00006: ATP
           synthase alpha/beta family nucleotide-binding domain,
           PF00306: ATP synthase ab C terminal, PF02874: ATP
           synthase alpha/beta family beta-barrel domain
          Length = 559

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 269 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 442
           T G+  G  VL TG P++V +G   LG I + +  P+ +  E+    Y+P   + P+L
Sbjct: 144 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 201


>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
           identical to SP|P83483 ATP synthase beta chain 1,
           mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
           thaliana}; strong similarity to SP|P17614 ATP synthase
           beta chain, mitochondrial precursor (EC 3.6.3.14)
           {Nicotiana plumbaginifolia}; contains Pfam profiles
           PF00006: ATP synthase alpha/beta family
           nucleotide-binding domain, PF00306: ATP synthase ab C
           terminal, PF02874: ATP synthase alpha/beta family
           beta-barrel domain; supporting cDNA
           gi|26452102|dbj|AK118538.1|
          Length = 556

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 269 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 442
           T G+  G  VL TG P++V +G   LG I + +  P+ +  E+    Y+P   + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198


>At2g43870.1 68415.m05454 polygalacturonase, putative / pectinase,
           putative similar to SP|P48979 Polygalacturonase
           precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
           persica}; contains PF00295: Glycosyl hydrolases family
           28 (polygalacturonases)
          Length = 384

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = -3

Query: 556 HPVLDQSVLVYNTIQISTGD----VGPDLNI*WVKFPVNLPGQGRHVDTLGDVDGLSQLV 389
           H     SV ++NT +ISTGD    +GP  N  W++     PG G  + +LG     S + 
Sbjct: 194 HVQSSSSVSIFNT-KISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQ 252

Query: 388 DVLEGTLNTVKDGTQDTGTK 329
           +V   T+ TV     D G +
Sbjct: 253 NV---TVKTVTFTGTDNGVR 269


>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1059

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 9/34 (26%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 377 LKDINELTQSIYIPKGIN-VPSLAREVDWEFNPL 475
           L+ + + ++ +Y+P+G+N +P   R ++W++ P+
Sbjct: 613 LRVLRDRSEKLYLPQGLNYLPKKLRLIEWDYFPM 646


>At4g21240.1 68417.m03071 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 417

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 464 FNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVP-PKAKGTVTY 592
           +NP +  V   +  GD Y IV  N  ++  + +P PK   TV Y
Sbjct: 125 YNPSSESVNGLVCFGDFYNIVVWNPSMRQHVTLPEPKPHSTVRY 168


>At1g55390.1 68414.m06335 DC1 domain-containing protein similar to
           hypothetical protein GI:4204272 from [Arabidopsis
           thaliana] contains weak PHD zinc finger motifs contains
           weak PHD zinc finger motifs DC1 domain, a divergent
           protein kinase C domain of unknown function.
          Length = 684

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 253 DGGHVTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGED 122
           DGGH     + + D+ IV D D +   R G   G  DG    +D
Sbjct: 124 DGGHDDEDNNFVDDDVIVNDGDGVGEDRDGDSDGDGDGGDDDDD 167


>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
           nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
           cDNA provides a truncated ORF likely due to a skipped
           exon. An alternative ORF is provided.
          Length = 383

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 363 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSYTWM 250
           P  + P  P PSS     FPV +  SPT+ P  SSY  M
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSYPQM 241


>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
           nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
           cDNA provides a truncated ORF likely due to a skipped
           exon. An alternative ORF is provided.
          Length = 661

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 363 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSYTWM 250
           P  + P  P PSS     FPV +  SPT+ P  SSY  M
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSYPQM 241


>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
           cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
          Length = 1483

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -3

Query: 649 VELRLQHHVCDFVVPGRCDIGNCSLGFGRDQHPVLDQSVLVYNTIQIST 503
           V     + VC  V+ G C IG   L  G  +  V D  VLV N +  +T
Sbjct: 677 VNYPFDNFVCSAVISGFCKIGKPELALGFFESAV-DSGVLVPNLVTYTT 724


>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
           family protein similar to Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 368

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 401 QSIYIPKGINVPSLAREVDWEFNPLNVKVGSHI 499
           +S+  P+G N+PS  R++D + N  N  +GS +
Sbjct: 163 RSVDPPRGRNIPSSRRKIDVDNNNYNHTLGSSV 195


>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 357

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 625 VCDFVVPGRCDIGNCSLGFGRDQHPVLDQSVLVYNTIQISTGD 497
           +CDF+ P +      +LGFGR+   +   + + Y T+ +++ D
Sbjct: 265 LCDFLSP-KISTEFINLGFGRNGFTLTMDAKVTYRTVSVTSND 306


>At3g01040.1 68416.m00005 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 533

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 329 LGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVP 436
           LGP +LG I D  QR ++D  ++   +    IP G+ +P
Sbjct: 77  LGPRLLGRIDDSEQRLVRDFYKILNEVSTQEIPDGLKLP 115


>At2g41820.1 68415.m05168 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 890

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 188 VRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGK 313
           +R+G NELVG I R  G+++ +  +E       G+ V    K
Sbjct: 259 IRIGNNELVGVIPRTIGNISGLTYFEADKNNLSGEIVAEFSK 300


>At1g34480.1 68414.m04285 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 602

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 628 HVCDFVVPGRCDIGNCSLGFGRDQH 554
           H CDFVV   C    C +   R QH
Sbjct: 210 HQCDFVVHKECIYSPCIIKISRHQH 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,454
Number of Sequences: 28952
Number of extensions: 342792
Number of successful extensions: 1070
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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