Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10c13
(460 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65540.1 68414.m07435 calcium-binding EF hand family protein ... 34 0.040
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 33 0.070
At3g05110.1 68416.m00555 hypothetical protein 32 0.16
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 31 0.37
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 30 0.86
At2g22795.1 68415.m02704 expressed protein 29 2.0
At2g04495.1 68415.m00454 expressed protein 29 2.0
At5g13340.1 68418.m01535 expressed protein 28 2.6
At4g27980.1 68417.m04014 expressed protein 28 2.6
At3g51910.1 68416.m05694 heat shock transcription factor family ... 28 2.6
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 28 2.6
At5g37475.1 68418.m04510 translation initiation factor-related s... 28 3.5
At4g05110.1 68417.m00759 equilibrative nucleoside transporter, p... 28 3.5
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 28 3.5
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 28 3.5
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 27 4.6
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 27 4.6
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 27 4.6
At5g53400.1 68418.m06635 nuclear movement family protein contain... 27 6.1
At4g26630.1 68417.m03837 expressed protein 27 6.1
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 27 6.1
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 27 6.1
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 6.1
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 27 8.1
At5g45510.1 68418.m05590 leucine-rich repeat family protein cont... 27 8.1
At3g31320.1 68416.m03987 hypothetical protein 27 8.1
At3g20260.1 68416.m02566 expressed protein 27 8.1
At2g21800.1 68415.m02591 expressed protein 27 8.1
At1g66960.1 68414.m07614 lupeol synthase, putative / 2,3-oxidosq... 27 8.1
>At1g65540.1 68414.m07435 calcium-binding EF hand family protein
similar to leucine zipper-EF-hand containing
transmembrane protein 1 [Homo sapiens] GI:4235226;
contains Pfam profile PF00036: EF hand
Length = 736
Score = 34.3 bits (75), Expect = 0.040
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Frame = +1
Query: 154 TVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEE------KERASALEIKALEEM 315
TVGV ++ +S+++ KL +E +E++I++ + +EE KE AS+ + AL+EM
Sbjct: 479 TVGVT-ALSSEDSVSERKRKLEYLEMQEELIKEEEEEEEEEMAKMKESASSQKDVALDEM 537
Query: 316 ASGTAK 333
+ TAK
Sbjct: 538 MASTAK 543
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 33.5 bits (73), Expect = 0.070
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +1
Query: 199 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 312
+KEA L IEAKEK R+ + KEE+ER + +K +EE
Sbjct: 133 EKEASL--IEAKEKEEREQQEKEERERIAEENLKRVEE 168
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 190 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK 300
+L +E +LRE+EAK K D K KE +E+ LE+K
Sbjct: 68 QLEARENELREVEAKRKFF-DLKEKELEEKEKELELK 103
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 31.1 bits (67), Expect = 0.37
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 172 GAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKE--RASALEIKALEEMASGTAK 333
G F++ + K++AKLRE + +K ++ KLK +E S E+KA +S K
Sbjct: 659 GKFYEKYMKKRDAKLREEWSLKKGEKETKLKSMQEALEQSRTEMKAKLSASSSERK 714
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 29.9 bits (64), Expect = 0.86
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 184 QNRLSKKEAKLREIEAKEKVIRDAKLK-EEKERASALEIKALEEM 315
Q R+ +EAK +EIEA + V+ D KL+ + + + EI L+ +
Sbjct: 909 QMRMEIEEAKSQEIEALQSVLTDIKLQLRDTQETKSKEISDLQSV 953
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 312
S++E +E EAKEKV ++ K E + +E LEE
Sbjct: 462 SQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEE 500
>At2g04495.1 68415.m00454 expressed protein
Length = 202
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 157 VGVLYGAFHQNRLSKKEAKLREI--EAKEKVIRDAKLKEEKERASALEIKALEE 312
VG + G+FH N S + K I + KE I+D K + K+ + LE K++ +
Sbjct: 66 VGFILGSFHGNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSK 119
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 199 KKEAKLREIEAKEKVIRDAKLKEEKERASAL-EIKALEEMA 318
K+E + R EA EK+ D +++ +KE+ +AL E + EE A
Sbjct: 118 KEEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQA 158
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 193 LSKKEAKLREIEAKEKVIRDAKLKEE-KERASALEIKALE 309
L KKE +LR +E KEK I L+E R S LE K +E
Sbjct: 48 LEKKEERLRVVEMKEKEI--GLLEESISRRLSVLEEKEIE 85
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 178 FHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKI 351
FH + ++ E + E EA+EK D + EE + E+K EE K+ +K+
Sbjct: 161 FHLKQRAETERRNEESEAREK---DLRALEEAVKEKTAELKRKEETLELKMKEEAEKL 215
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 145 SFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASG 324
SFL + +F L +++ K++E+E E AK K S LE+ ALE G
Sbjct: 180 SFLARAMQSPSFLHQLLKQRDKKIKELEDNE----SAKRKRGSSSMSELEVLALEMQGHG 235
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 309
S+K+ L E+E +EK+ ++KEE++R L+ A E
Sbjct: 755 SQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAE 792
>At5g37475.1 68418.m04510 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 225
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 124 LIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 285
L+ F + SF +G+L + + K A ++++ + I + KLK EKE A+
Sbjct: 139 LVPFEK-SFHYIGLLKAVMRLSVANMKAADVKDVASSITAIANEKLKAEKEAAA 191
>At4g05110.1 68417.m00759 equilibrative nucleoside transporter,
putative (ENT6) identical to putative equilibrative
nucleoside transporter ENT6 [Arabidopsis thaliana]
GI:16518997; contains similarity to SWISS-PROT:O54699
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type)
[Rattus norvegicus]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 418
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +1
Query: 19 IGFFQKVSYNNCFTVQQFYNKMSDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLS 198
+GF +S+N+ T +Y K+ P P R+ L+ + ++F + +L A+H+++ S
Sbjct: 26 LGFGSLISWNSMLTTADYYYKV--FPDYHPSRVLTLV-YQPFAFGAIVIL--AYHESKTS 80
Query: 199 KKEAKL 216
++ L
Sbjct: 81 TRKRNL 86
>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 332
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 160 GVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 288
GV A ++ K K RE AKE+ R+ ++KEE+ +
Sbjct: 121 GVSVTAQQEHSKPSKSVKRREKRAKEEADREQRIKEEQSHVKS 163
>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 316
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 160 GVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 288
GV A ++ K K RE AKE+ R+ ++KEE+ +
Sbjct: 105 GVSVTAQQEHSKPSKSVKRREKRAKEEADREQRIKEEQSHVKS 147
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 199 KKEAKLREIEAKEKVIRDAKLKEEKERASA 288
K AK +I+A++K+I + K+K EK+++ +
Sbjct: 714 KLNAKEHQIQAQDKIIANLKMKLEKKQSKS 743
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 199 KKEAKLREIEAKEKVIRDAKLKEEKE 276
K E + R +EA+EK ++ K+KE++E
Sbjct: 683 KAENERRAVEAREKAEQERKMKEQQE 708
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 309
S+K+ L E+E +EK++ ++KEE++R + A E
Sbjct: 873 SQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAE 910
>At5g53400.1 68418.m06635 nuclear movement family protein contains
Pfam profile: PF03593 nuclear movement protein
Length = 304
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 229 AKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 336
AKEK+ + K K EKE +E KA +E+ KK
Sbjct: 64 AKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKK 99
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 199 KKEAKLREIEAKEKVIRDAKLKEEKE 276
K+E K +E+EA + + ++K+++EKE
Sbjct: 220 KEENKTKEVEAAKAEVDESKVEDEKE 245
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEKERAS 285
S+ + +L+E+E +E V++ +L KER S
Sbjct: 224 SELKLRLKEVETRESVLQQERLSFTKERES 253
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEKERAS 285
S+ + +L+E+E +E V++ +L KER S
Sbjct: 237 SELKLRLKEVETRESVLQQERLSFTKERES 266
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 265 EEKERASALEIKALEEMASGTAKK*KDKIVIS 360
E++ R SALE + LEE+ +A + ++K+ IS
Sbjct: 103 EDRIRISALEAEKLEELQKQSASELEEKLKIS 134
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 196 SKKEAKLREIEAKEKVIRDAKLK-----EEKERASALEIKALEEMASGTAK 333
+K + ++E E+ + D++L +E E A A E KALE++ S + K
Sbjct: 411 NKAKELMKEAESAHLALEDSELHLRVALDEAEEAKAAETKALEQIKSMSEK 461
>At5g45510.1 68418.m05590 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 1222
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 223 IEAKEKVIRDAKL-KEEKERASALEIKALEEMASGTAKK*KD 345
+E KE V++ + K++KE+ +A +++A +++ AKK KD
Sbjct: 150 LEKKEAVVKKLEDDKKKKEKEAAEKLEAEKKLVDPAAKKAKD 191
>At3g31320.1 68416.m03987 hypothetical protein
Length = 327
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 181 HQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASA 288
H + + LRE+ AK+K ++ L EEK A A
Sbjct: 241 HFVEMQSTKVTLREVSAKKKEDKERHLAEEKRLAEA 276
>At3g20260.1 68416.m02566 expressed protein
Length = 437
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 123 SNQVWTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAE 263
+N+V + RR+S L PE+ +E E+ D +G +C +E
Sbjct: 59 TNEVKRRLKELRRNSFMVLIPEEEEEEEEESYLDEDDDDGEDKCSSE 105
>At2g21800.1 68415.m02591 expressed protein
Length = 475
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 175 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE 309
A + +L K++ KL++ +K + KL+ EK++ + + KAL+
Sbjct: 199 AAEEKKLQKEQEKLQKAASKAEDAEHKKLEREKQKWAKEKDKALK 243
>At1g66960.1 68414.m07614 lupeol synthase, putative /
2,3-oxidosqualene-triterpenoid cyclase, putative similar
to lupeol synthase GI:1762150 from [Arabidopsis
thaliana], 2,3-oxidosqualene-triterpenoid cyclase
[Arabidopsis thaliana] GI:2738027
Length = 763
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 91 LPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLRE 222
LPY P+ + + R +++ + LYG +++ +LRE
Sbjct: 246 LPYFLPIHLGKAFSYTRITYMPISYLYGKKFVGQITPLIMQLRE 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,000,801
Number of Sequences: 28952
Number of extensions: 156487
Number of successful extensions: 613
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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