Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0075
(473 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65540.1 68414.m07435 calcium-binding EF hand family protein ... 36 0.014
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 32 0.23
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 31 0.40
At3g05110.1 68416.m00555 hypothetical protein 31 0.53
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 30 0.92
At3g44200.1 68416.m04739 protein kinase family protein contains ... 29 1.2
At5g67240.1 68418.m08475 exonuclease family protein contains exo... 29 1.6
At5g13340.1 68418.m01535 expressed protein 29 2.1
At3g51910.1 68416.m05694 heat shock transcription factor family ... 28 2.8
At3g20860.1 68416.m02637 protein kinase family protein contains ... 28 2.8
At5g37475.1 68418.m04510 translation initiation factor-related s... 28 3.7
At4g17730.1 68417.m02647 syntaxin 23 (SYP23) / PEP12-like protei... 28 3.7
At2g04515.1 68415.m00457 expressed protein 28 3.7
At5g06530.2 68418.m00737 ABC transporter family protein 27 6.5
At5g06530.1 68418.m00736 ABC transporter family protein 27 6.5
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 27 6.5
At4g26630.1 68417.m03837 expressed protein 27 6.5
At2g22795.1 68415.m02704 expressed protein 27 6.5
At2g04495.1 68415.m00454 expressed protein 27 6.5
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 6.5
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 27 8.6
At1g66960.1 68414.m07614 lupeol synthase, putative / 2,3-oxidosq... 27 8.6
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 27 8.6
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 27 8.6
>At1g65540.1 68414.m07435 calcium-binding EF hand family protein
similar to leucine zipper-EF-hand containing
transmembrane protein 1 [Homo sapiens] GI:4235226;
contains Pfam profile PF00036: EF hand
Length = 736
Score = 35.9 bits (79), Expect = 0.014
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Frame = -2
Query: 340 TVGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEE------KERASALEIKALEEM 179
TVGV ++ +S+++ KL +E QE++I++ + +EE KE AS+ + AL+EM
Sbjct: 479 TVGVT-ALSSEDSVSERKRKLEYLEMQEELIKEEEEEEEEEMAKMKESASSQKDVALDEM 537
Query: 178 ASGTAK 161
+ TAK
Sbjct: 538 MASTAK 543
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 31.9 bits (69), Expect = 0.23
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEE 182
+KEA L IEA+EK R+ + KEE+ER + +K +EE
Sbjct: 133 EKEASL--IEAKEKEEREQQEKEERERIAEENLKRVEE 168
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 31.1 bits (67), Expect = 0.40
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -2
Query: 322 GAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKE--RASALEIKALEEMASGTAK 161
G F++ + K++AKLRE + +K ++ KLK +E S E+KA +S K
Sbjct: 659 GKFYEKYMKKRDAKLREEWSLKKGEKETKLKSMQEALEQSRTEMKAKLSASSSERK 714
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 304 RLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIK 194
+L +E +LRE+EA+ K D K KE +E+ LE+K
Sbjct: 68 QLEARENELREVEAKRKFF-DLKEKELEEKEKELELK 103
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLK-EEKERASALEIKALEEM 179
Q R+ +EAK +EIEA + V+ D KL+ + + + EI L+ +
Sbjct: 909 QMRMEIEEAKSQEIEALQSVLTDIKLQLRDTQETKSKEISDLQSV 953
>At3g44200.1 68416.m04739 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 941
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 PNLIRGDIRTGAPYG-KSDIWL*NCCTVKQLLY 452
PN + ++ PYG KSDIW CC + Y
Sbjct: 171 PNYMCPELLADIPYGFKSDIWSLGCCIYEMAAY 203
>At5g67240.1 68418.m08475 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 745
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKERASA 206
K AK +I+AQ+K+I + K+K EK+++ +
Sbjct: 714 KLNAKEHQIQAQDKIIANLKMKLEKKQSKS 743
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKERASAL-EIKALEEMA 176
K+E + R EA EK+ D +++ +KE+ +AL E + EE A
Sbjct: 118 KEEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQA 158
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 349 SFLTVGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASG 170
SFL + +F L +++ K++E+E E AK K S LE+ ALE G
Sbjct: 180 SFLARAMQSPSFLHQLLKQRDKKIKELEDNE----SAKRKRGSSSMSELEVLALEMQGHG 235
>At3g20860.1 68416.m02637 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 427
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 357 PNLIRGDIRTGAPYG-KSDIWL*NCCTVKQLLYDTFGKNP 473
PN + ++ PYG KSDIW CC + + K P
Sbjct: 177 PNYMCPELLADIPYGYKSDIWSLGCCMFEVAAHQPAFKAP 216
>At5g37475.1 68418.m04510 translation initiation factor-related
similar to Eukaryotic translation initiation factor 3
subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j)
(Swiss-Prot:O75822) [Homo sapiens]
Length = 225
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 370 LIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERAS 209
L+ F + SF +G+L + + K A ++++ + I + KLK EKE A+
Sbjct: 139 LVPFEK-SFHYIGLLKAVMRLSVANMKAADVKDVASSITAIANEKLKAEKEAAA 191
>At4g17730.1 68417.m02647 syntaxin 23 (SYP23) / PEP12-like protein
identical to SP|O04378 Syntaxin 23 (AtSYP23) (AtPLP)
(AtPEP12-like protein) {Arabidopsis thaliana}
Length = 255
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 4 GGGTRERTSLDLFSPIFSLNKLITT 78
GGG+R+ T+ D+ S IF +N ++T
Sbjct: 22 GGGSRQDTTQDVASGIFQINTSVST 46
>At2g04515.1 68415.m00457 expressed protein
Length = 196
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -2
Query: 337 VGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 158
VG + G+FH N S K I Q K + LKE K + LEE S +K+
Sbjct: 66 VGFILGSFHGNSDSLSHGKAINIVEQTKEVGIKDLKETKVNK---VVALLEE--SNVSKE 120
Query: 157 *KDKIVIS 134
+ ++V+S
Sbjct: 121 EEGRVVLS 128
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 FSWASISRSFAS-FFDSLFWWKAPYRTPTVRKDQ 353
FSW +++ ++ L WW++ RTP +DQ
Sbjct: 516 FSWLRVTQVLSTAVILGLLWWQSDIRTPMGLQDQ 549
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 FSWASISRSFAS-FFDSLFWWKAPYRTPTVRKDQ 353
FSW +++ ++ L WW++ RTP +DQ
Sbjct: 516 FSWLRVTQVLSTAVILGLLWWQSDIRTPMGLQDQ 549
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKE 218
K E + R +EA+EK ++ K+KE++E
Sbjct: 683 KAENERRAVEAREKAEQERKMKEQQE 708
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKE 218
K+E K +E+EA + + ++K+++EKE
Sbjct: 220 KEENKTKEVEAAKAEVDESKVEDEKE 245
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEE 182
S++E +E EA+EKV ++ K E + +E LEE
Sbjct: 462 SQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEE 500
>At2g04495.1 68415.m00454 expressed protein
Length = 202
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 337 VGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEK 221
VG + G+FH N S + K I Q K + LKE K
Sbjct: 66 VGFILGSFHGNSESLSQGKAINIIEQTKEVGIKDLKETK 104
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -2
Query: 229 EEKERASALEIKALEEMASGTAKK*KDKIVIS 134
E++ R SALE + LEE+ +A + ++K+ IS
Sbjct: 103 EDRIRISALEAEKLEELQKQSASELEEKLKIS 134
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAKLK-----EEKERASALEIKALEEMASGTAK 161
+K + ++E E+ + D++L +E E A A E KALE++ S + K
Sbjct: 411 NKAKELMKEAESAHLALEDSELHLRVALDEAEEAKAAETKALEQIKSMSEK 461
>At1g66960.1 68414.m07614 lupeol synthase, putative /
2,3-oxidosqualene-triterpenoid cyclase, putative similar
to lupeol synthase GI:1762150 from [Arabidopsis
thaliana], 2,3-oxidosqualene-triterpenoid cyclase
[Arabidopsis thaliana] GI:2738027
Length = 763
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -2
Query: 403 LPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLRE 272
LPY P+ + + R +++ + LYG +++ +LRE
Sbjct: 246 LPYFLPIHLGKAFSYTRITYMPISYLYGKKFVGQITPLIMQLRE 289
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAKLKEEKERAS 209
S+ + +L+E+E +E V++ +L KER S
Sbjct: 224 SELKLRLKEVETRESVLQQERLSFTKERES 253
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAKLKEEKERAS 209
S+ + +L+E+E +E V++ +L KER S
Sbjct: 237 SELKLRLKEVETRESVLQQERLSFTKERES 266
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,522,388
Number of Sequences: 28952
Number of extensions: 168288
Number of successful extensions: 638
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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