Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0073
         (346 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794...    27   2.5  
At3g23000.1 68416.m02900 CBL-interacting protein kinase 7 (CIPK7...    27   4.4  
At2g16990.1 68415.m01959 expressed protein                             26   5.9  
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu...    26   7.7  
At1g61310.1 68414.m06910 disease resistance protein (CC-NBS-LRR ...    26   7.7  

>At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794:
           Domain of Unknown function
          Length = 350

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 176 HFKRAMKWKHDLGCSEKKPGIEISDLTYEIKGKKFIFDYT 295
           H +R ++W  DL     K  ++ S  T +++ +KF   YT
Sbjct: 150 HMERMLRWSEDLAARGGKKAVDPSVGTPKMEIRKFAKSYT 189


>At3g23000.1 68416.m02900 CBL-interacting protein kinase 7 (CIPK7)
           identical to CBL-interacting protein kinase 7
           [Arabidopsis thaliana] gi|13249113|gb|AAK16682; contains
           Pfam profiles PF00069: Protein kinase domain and
           PF03822: NAF domain; identical to cDNA CBL-interacting
           protein kinase 7 (CIPK7) GI:13249112
          Length = 429

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 193 EVETRLGMLGEKAGYRNK*PYVRNQGE 273
           EVE +  M+GEK GY  K   ++ +GE
Sbjct: 343 EVEEKAKMIGEKLGYVVKKKMMKKEGE 369


>At2g16990.1 68415.m01959 expressed protein
          Length = 456

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 24  LKWSEWFSIGQPLLLSQPGAIWTLPLTCSSLRHQMHPGD 140
           + W+ W      + +  PGA++ +P  C     Q+ PG+
Sbjct: 339 ISWAPWVPYLTTVFV--PGALFVMPSVCGIASRQVGPGE 375


>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
           putative similar to cytosine-5 methyltransferase (METII)
           [Arabidopsis thaliana] GI:6523846; contains Pfam
           profiles PF01426: BAH domain, PF00145: C-5
           cytosine-specific DNA methylase
          Length = 1404

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 253 YVRNQGEKVYLRLHGAR*RRRNHDRSLQDNK 345
           +V +QGE +Y +L G     +NH+    DN+
Sbjct: 162 FVISQGEFIYNQLAGLDETSKNHETKFVDNR 192


>At1g61310.1 68414.m06910 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 925

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 219 EHPKSCFHFMALL-KWSYTFSCTKIDRSLQGAFGDEAMNMSTAESRSHRAVTTAVVARLK 43
           EH KSCF + AL  +    ++ T ID+ +   F  E   +  A ++ +  + T   A L 
Sbjct: 404 EHIKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGYAMLGTLTRANLL 463

Query: 42  T 40
           T
Sbjct: 464 T 464


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,503,227
Number of Sequences: 28952
Number of extensions: 174968
Number of successful extensions: 474
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 419412672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)