Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0062
         (703 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g14400.3 68417.m02222 ankyrin repeat family protein contains ...    29   2.3  
At4g14400.2 68417.m02221 ankyrin repeat family protein contains ...    29   2.3  
At4g14400.1 68417.m02220 ankyrin repeat family protein contains ...    29   2.3  
At4g14390.1 68417.m02219 ankyrin repeat family protein contains ...    28   5.2  
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ...    28   5.2  
At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase, p...    28   6.9  
At2g32970.1 68415.m04041 expressed protein                             28   6.9  
At1g25320.1 68414.m03142 leucine-rich repeat transmembrane prote...    28   6.9  
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill...    27   9.1  

>At4g14400.3 68417.m02222 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 604

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 332 VCFQNGSFPLHSFSETQH 385
           VC Q+GSFP+HS ++ +H
Sbjct: 259 VCDQDGSFPIHSAAKNEH 276


>At4g14400.2 68417.m02221 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 604

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 332 VCFQNGSFPLHSFSETQH 385
           VC Q+GSFP+HS ++ +H
Sbjct: 259 VCDQDGSFPIHSAAKNEH 276


>At4g14400.1 68417.m02220 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 670

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 332 VCFQNGSFPLHSFSETQH 385
           VC Q+GSFP+HS ++ +H
Sbjct: 325 VCDQDGSFPIHSAAKNEH 342


>At4g14390.1 68417.m02219 ankyrin repeat family protein contains
           Pfam profile: PF00023 ankyrin repeat
          Length = 694

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 332 VCFQNGSFPLHSFSETQHK 388
           VC Q+GSFP+H+ +E  H+
Sbjct: 354 VCDQDGSFPIHTAAEKGHE 372


>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 941

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = +3

Query: 285 KVVC--KCS---ALLLPWRSRCVFKMALFHFIP---FRKHNTNMPHNRLPVSINLLNSMQ 440
           K+ C  KCS    LLLP+       +  F F+P       +TNM    LP  I+ L S+Q
Sbjct: 614 KISCSSKCSNLSTLLLPYNKLVNISVGFFLFMPKLVVLDLSTNMSLIELPEEISNLCSLQ 673

Query: 441 YL 446
           YL
Sbjct: 674 YL 675


>At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase,
           putative similar to laccase [Populus balsamifera subsp.
           trichocarpa][GI:3805960]
          Length = 484

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -3

Query: 398 MRHICVVFPKRNEVEKSHFENTPT 327
           + ++  VFPK+N + +++++ TPT
Sbjct: 304 INNVSFVFPKQNSIMQAYYQGTPT 327


>At2g32970.1 68415.m04041 expressed protein
          Length = 577

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -3

Query: 242 PYI*HLADNYYLVVRLVSLVIIFFDLFQPFNVSY*T---YCGYQFD 114
           P++ H A   Y+++ ++++VI F+DL++   V   T    CG  FD
Sbjct: 275 PWMCHFARALYVMISVITVVIGFYDLYKNVPVLKATASRLCGPLFD 320


>At1g25320.1 68414.m03142 leucine-rich repeat transmembrane protein
           kinase, putative similar to putative receptor-like
           protein kinase GI:4262228 from [Arabidopsis thaliana]
          Length = 702

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 67  GNAPDKIFISFKFHNLSN*YPQ 132
           GN P+K++++  ++NLS   PQ
Sbjct: 234 GNLPEKVYVNLAYNNLSGPIPQ 255


>At1g44120.1 68414.m05096 C2 domain-containing protein /
            armadillo/beta-catenin repeat family protein similar to
            CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
            profiles PF00514: Armadillo/beta-catenin-like repeat,
            PF00168: C2 domain
          Length = 2114

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 295  VNAVHYYYPGGVGVFSKWLFSTS 363
            +N  HYY+   + V SK LFST+
Sbjct: 1649 INPEHYYFTVTIPVLSKMLFSTA 1671


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,210,091
Number of Sequences: 28952
Number of extensions: 249769
Number of successful extensions: 580
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)