Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0054
(431 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 0.59
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.0
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 1.0
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 1.8
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 1.8
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 2.4
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 2.4
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 2.4
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 3.1
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 3.1
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 4.1
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 27 5.5
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 27 5.5
At1g67650.1 68414.m07720 expressed protein 27 5.5
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 27 5.5
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 27 5.5
At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containi... 27 7.2
At3g54030.1 68416.m05974 protein kinase family protein contains ... 26 9.6
At1g70520.1 68414.m08116 protein kinase family protein contains ... 26 9.6
At1g50610.1 68414.m05685 leucine-rich repeat transmembrane prote... 26 9.6
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 197 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 90
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 221 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 108
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 269
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 96 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 275
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 276 IGFPDD 293
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 194 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 102
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 165 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 317
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 358 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 179
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 178 PG 173
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 358 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 179
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 178 PG 173
G
Sbjct: 195 KG 196
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 319 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 140
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 139 V 137
+
Sbjct: 686 L 686
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 17 HSRDAGHKHEDNHLFVYYRHRGNGSRHKS 103
H D H H+ NH ++ H G+ H S
Sbjct: 312 HDHDHDHHHDHNHDHDHHHHDGHDHHHHS 340
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 108 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 287
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 288 DDDAIRTE 311
+ I E
Sbjct: 563 GNSCISHE 570
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 267 LKAIGFPDDDAIRTEFASKSRDLR 338
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 267 LKAIGFPDDDAIRTEFASKSRDLR 338
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 114 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 293
L++G + +R++ E+VKN+ ++ ++ LA++ + E +E+ LK + P
Sbjct: 470 LRHGQEEEASRLYEEIVKNHNSTDALV---GLVTTLARVNV-EKAEAYEKQLKPL--PGL 523
Query: 294 DAIRTEFASKSRDLRSIKGV 353
A+ + K+ + I+G+
Sbjct: 524 KAVDVDNLEKTSGAKPIEGI 543
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 99 NLSNVLKNGNDNFTARMFTEVVK 167
NL +LKNG DN A +F +++
Sbjct: 431 NLLEILKNGTDNIGAEIFEPLIR 453
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 258 EELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYV 383
EE +K + D+D R EF + DLR V+ K N V V
Sbjct: 96 EENVKHMLMDDEDPFRDEFPHAAEDLRGRLWVDDKNGNYVVV 137
>At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 687
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 218 RRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDGC 87
R Q KC ED A + +GK+S + + +F+ +REI GC
Sbjct: 70 RSQECKCDEDVALS--VIKTYGKNSMPDQALDVFKRMREIF-GC 110
>At3g54030.1 68416.m05974 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 490
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 210 LPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 317
L P L D +E+L IG+ DD+ I E +
Sbjct: 338 LTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELS 373
>At1g70520.1 68414.m08116 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 649
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 283 SLTTMLYEQNSRVKAVIFDQLKALSLKWRIKYTFMM 390
SL Y QN + IFD + +L W+ +YT ++
Sbjct: 394 SLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIV 429
>At1g50610.1 68414.m05685 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]
Length = 686
Score = 26.2 bits (55), Expect = 9.6
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 114 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 293
++N D FT T + KN P ++ SVL P+A + + LL+ F D
Sbjct: 1 MRNWEDPFTLACNTALKKNLPSCIFIIIFISVLCPVAMSQVVVPDSDADCLLR---FKDT 57
Query: 294 DAIRTEFAS 320
A +EF S
Sbjct: 58 LANGSEFRS 66
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,905,000
Number of Sequences: 28952
Number of extensions: 171297
Number of successful extensions: 624
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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