Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0202
(403 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 125 1e-29
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 123 5e-29
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 112 7e-26
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 109 7e-25
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 51 3e-07
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 46 7e-06
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.29
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 0.50
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 30 0.66
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 1.2
At2g37070.1 68415.m04549 expressed protein 28 2.0
At2g36350.1 68415.m04461 protein kinase, putative similar to pro... 28 2.7
At5g41320.1 68418.m05022 expressed protein 27 4.7
At1g31910.1 68414.m03921 GHMP kinase family protein contains TIG... 27 4.7
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 27 6.2
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 27 6.2
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 27 6.2
At2g42290.1 68415.m05235 leucine-rich repeat family protein cont... 27 6.2
At1g58210.1 68414.m06610 kinase interacting family protein simil... 27 6.2
At1g03190.2 68414.m00297 DNA repair protein / transcription fact... 27 6.2
At1g03190.1 68414.m00296 DNA repair protein / transcription fact... 27 6.2
At1g03090.2 68414.m00284 methylcrotonyl-CoA carboxylase alpha ch... 27 6.2
At1g03090.1 68414.m00283 methylcrotonyl-CoA carboxylase alpha ch... 27 6.2
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 125 bits (301), Expect = 1e-29
Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = +3
Query: 66 VFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 239
V FEE+F DD WE+ WV SE + G++K TAG + D +DKG++TSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRFYAIS 81
Query: 240 RKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMF 401
+F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMF
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMF 135
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 123 bits (296), Expect = 5e-29
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = +3
Query: 54 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 227
++ +V FEEKF +D WE WV S+ + G++K TAG + D +DKG++TSED RF
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRF 77
Query: 228 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMF 401
YA+S +F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++Q G+TPY IMF
Sbjct: 78 YAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMF 135
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 112 bits (270), Expect = 7e-26
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 236
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 237 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMF 401
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MF
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMF 141
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 109 bits (262), Expect = 7e-25
Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 236
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 237 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 398
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 51.2 bits (117), Expect = 3e-07
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = +3
Query: 90 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNE 266
D+ ++ W+ S++ E G +K S+ +D GL SE AR Y + ++ +P + +
Sbjct: 36 DEPFDGRWIVSKNSDYE-GVWKHAK----SEGHEDYGLLVSEKARKYGIVKELDEPLNLK 90
Query: 267 GKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMF 401
+V+Q+ V+ ++ ++CGG YLK + + E+PY IMF
Sbjct: 91 EGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMF 138
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 46.4 bits (105), Expect = 7e-06
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Frame = +3
Query: 90 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF---KPFS 260
D+ ++ WV SE + G +K S+ DD GL SE A+ Y + ++ +P +
Sbjct: 36 DEPFDGRWVVSEKAEYQ-GVWKHEK----SEGHDDYGLLVSEKAKKYGIVKELDVDEPLN 90
Query: 261 -NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMF 401
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMF
Sbjct: 91 LNEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMF 140
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 282 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 395
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 0.50
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 282 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 392
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 29.9 bits (64), Expect = 0.66
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = -1
Query: 259 LNG---LNLRERA*NLASSEVF-KPLSSSGSLKNFPAVNLNFPNSFPGC-SLYTQLLSHE 95
LNG L+L + + NL + ++ KPL S +K+ P +++ PNS P C + + + L +
Sbjct: 305 LNGDRILSLLKHSPNLQTLKLNEKPLRS---IKDQPNISVRKPNSVPECLTFHLETLEWQ 361
Query: 94 S-SGNFSSKNTSQFIEDNASKLTTTSTTAF 8
+G K + +I NA +L T + + +
Sbjct: 362 GYAGRPEDKEIAVYILGNALRLNTATISRY 391
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 109 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 20
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 28.3 bits (60), Expect = 2.0
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = -1
Query: 379 SPCMSFCSSLQSKTLRYPPPQSMSCS----CLTVNXTTKGLPSLLNGLNLRERA*NLAS- 215
+P + F S+L+S S SCS CL+V+ T PS+ + ++++ +AS
Sbjct: 164 TPVVPFKSALRSSVASKNELTS-SCSSIESCLSVSSTASNKPSIHSVKQKKDQSLRIASH 222
Query: 214 SEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASK 35
S +P SS+GS +N L P G + + SS ++SS++ F + +K
Sbjct: 223 SLANRPKSSAGS-RNID--QLKVPPVSAGRTYKFNVSRLSSSVDWSSESPRAFTPNKMAK 279
>At2g36350.1 68415.m04461 protein kinase, putative similar to
protein kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 949
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 262 MRVNPWSXS----SLSNMNKTLTVEADTLRSLTANWSRRTCTERPHMRL 396
+R NP S SLS+ N + T S +N SR +C +PHM +
Sbjct: 489 IRANPTSSEKFDFSLSSKNSLGDYSSSTSMSEESNLSRFSCGNKPHMSM 537
>At5g41320.1 68418.m05022 expressed protein
Length = 515
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 214 SEVFKPLSSSGSLKNFPAVNLNFPNSFPG 128
S +F LSSS L++FP + FP+S G
Sbjct: 366 SSLFPKLSSSSLLQSFPVPSSLFPSSSQG 394
>At1g31910.1 68414.m03921 GHMP kinase family protein contains
TIGRFAM profile TIGR01219: phosphomevalonate kinase;
contains Pfam PF00288: GHMP kinases putative ATP-binding
protein domain; similar to Phosphomevalonate kinase (EC
2.7.4.2) (Swiss-Prot:P24521) [Saccharomyces cerevisiae]
Length = 505
Score = 27.1 bits (57), Expect = 4.7
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 144 GKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKP 275
GK +T G + + + GL S +ARFYA+ KP + E KP
Sbjct: 9 GKVLMTGGYLVLE-KPNAGLVLSTNARFYAI---VKPINEEVKP 48
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 383 GLSVHVLLLQFAVKDLKVSASTVNVLFMFDSELXDQGFTLITERFELTGESIEPRIFR 210
G V LL L ++ +T +V+ ++DS+ Q +R G+ E ++FR
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 618
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 383 GLSVHVLLLQFAVKDLKVSASTVNVLFMFDSELXDQGFTLITERFELTGESIEPRIFR 210
G V LL L ++ +T +V+ ++DS+ Q +R G+ E ++FR
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 618
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 383 GLSVHVLLLQFAVKDLKVSASTVNVLFMFDSELXDQGFTLITERFELTGESIEPRIFR 210
G V LL L ++ +T +V+ ++DS+ Q +R G+ E ++FR
Sbjct: 556 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 613
>At2g42290.1 68415.m05235 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 646
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -1
Query: 403 PNIISYGVSP---CMSFCSSLQSKTL 335
P+I+S VS CMSFCSSL S L
Sbjct: 4 PSILSLVVSSIFLCMSFCSSLNSDGL 29
>At1g58210.1 68414.m06610 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) {Petunia
integrifolia}
Length = 1246
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 180 DPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDI 314
+ E +KG T+ RFYAL KF+ ++ V++ T + E+D+
Sbjct: 583 EAEIEKGRITTAKERFYALRNKFEKPESDVLDEVIR-TDEEEEDV 626
>At1g03190.2 68414.m00297 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 337 RSLTANWSRRTCTERPHMRLC 399
R TA+W R TE P++ LC
Sbjct: 135 RKRTASWVRALSTENPNVELC 155
>At1g03190.1 68414.m00296 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 337 RSLTANWSRRTCTERPHMRLC 399
R TA+W R TE P++ LC
Sbjct: 135 RKRTASWVRALSTENPNVELC 155
>At1g03090.2 68414.m00284 methylcrotonyl-CoA carboxylase alpha
chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase
1 (MCCA) nearly identical to SP|Q42523
Methylcrotonyl-CoA carboxylase alpha chain,
mitochondrial precursor (EC 6.4.1.4)
(3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha
subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
alpha subunit) {Arabidopsis thaliana}
Length = 734
Score = 26.6 bits (56), Expect = 6.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 132 GKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQD 311
G E +FK G FS+ E+ +TS + + P + LVV+ V++E
Sbjct: 630 GSEHHQFKQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAG----LVVKVLVENEAK 685
Query: 312 IDCGGGYLKVFDCKLE 359
+D G L + K+E
Sbjct: 686 VDQGQPILVLEAMKME 701
>At1g03090.1 68414.m00283 methylcrotonyl-CoA carboxylase alpha
chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase
1 (MCCA) nearly identical to SP|Q42523
Methylcrotonyl-CoA carboxylase alpha chain,
mitochondrial precursor (EC 6.4.1.4)
(3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha
subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
alpha subunit) {Arabidopsis thaliana}
Length = 714
Score = 26.6 bits (56), Expect = 6.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 132 GKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQD 311
G E +FK G FS+ E+ +TS + + P + LVV+ V++E
Sbjct: 610 GSEHHQFKQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAG----LVVKVLVENEAK 665
Query: 312 IDCGGGYLKVFDCKLE 359
+D G L + K+E
Sbjct: 666 VDQGQPILVLEAMKME 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,147,843
Number of Sequences: 28952
Number of extensions: 182312
Number of successful extensions: 615
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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