Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021105X
(464 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 80 8e-16
At5g13650.2 68418.m01585 elongation factor family protein contai... 49 1e-06
At5g13650.1 68418.m01584 elongation factor family protein contai... 47 5e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 46 1e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 45 2e-05
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 44 4e-05
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 44 4e-05
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 42 2e-04
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 41 5e-04
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 38 0.003
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 38 0.003
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.003
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.17
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 32 0.17
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.17
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.17
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.17
At3g06180.1 68416.m00710 expressed protein 30 0.67
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 0.89
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 0.89
At2g05120.1 68415.m00539 expressed protein 29 1.5
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 28 2.7
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 28 3.6
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 27 4.7
At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969... 27 4.7
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 27 4.7
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 27 6.2
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 6.2
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 27 8.3
At1g18160.1 68414.m02256 protein kinase family protein contains ... 27 8.3
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 79.8 bits (188), Expect = 8e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 77 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 217
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA 47
Score = 70.9 bits (166), Expect = 4e-13
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = +3
Query: 258 DEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 437
DE +R ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTA
Sbjct: 62 DEAERGITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTA 117
Query: 438 ALR 446
ALR
Sbjct: 118 ALR 120
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/48 (39%), Positives = 35/48 (72%)
Frame = +2
Query: 68 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 211
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A +
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKV 109
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAAL 443
K +N+ID+PGH DF EV L
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVL 167
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 47.2 bits (107), Expect = 5e-06
Identities = 16/33 (48%), Positives = 29/33 (87%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 211
+D++ N+RN++++AHVDHGK+TL DS++ +A +
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKV 108
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAAL 443
K +N+ID+PGH DF EV L
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVL 166
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +3
Query: 255 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 434
K +++R IT+K+ +MF+E + +D + G+L+NLID+PGHVDFS EV+
Sbjct: 105 KLQRERGITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVS 153
Query: 435 AAL 443
+L
Sbjct: 154 RSL 156
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 131 IRNMSVIAHVDHGKSTLTDSLVSKAGII 214
IRN S+IAH+DHGKSTL D L+ G I
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTI 93
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 45.2 bits (102), Expect = 2e-05
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 128 NIRNMSVIAHVDHGKSTLTDSLVSKAGII 214
NIRN S+IAH+DHGKSTL D L+ G +
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTV 113
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 378 FLINLIDSPGHVDFSSEVTAAL 443
F +NLID+PGHVDFS EV+ +L
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSL 173
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 4e-05
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 258 DEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 437
DEQ+R I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA
Sbjct: 184 DEQERNISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTA 228
Query: 438 ALR 446
+LR
Sbjct: 229 SLR 231
Score = 32.3 bits (70), Expect = 0.17
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 107 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 202
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 4e-05
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 258 DEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 437
DEQ+R I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA
Sbjct: 184 DEQERNISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTA 228
Query: 438 ALR 446
+LR
Sbjct: 229 SLR 231
Score = 32.3 bits (70), Expect = 0.17
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 107 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 202
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 42.3 bits (95), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 125 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
R +RN+ ++AHVDHGK+TL D L++ +G
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSG 34
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAALR 446
K + +NLIDSPGH+DF SEV+ A R
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAAR 96
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 83 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 193
+FTV RG ++K+ N+ I HVDHGK+TLT +L
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAAL 99
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAALRSL 452
K + +N+ID+PGHVDF+ EV ALR L
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVL 157
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 214
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 372 KGFLINLIDSPGHVDFSSEVTAALRSL 452
K + +N+ID+PGHVDF+ EV ALR L
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVL 157
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 214
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 285 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRSL 452
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALR L
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVL 185
Score = 29.9 bits (64), Expect = 0.89
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 125 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
++ RN+ ++AH+D GK+T T+ ++ G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 32.3 bits (70), Expect = 0.17
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 107 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 202
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 147
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 113 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At3g06180.1 68416.m00710 expressed protein
Length = 241
Score = 30.3 bits (65), Expect = 0.67
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +1
Query: 97 RDPWDDGQEAEYPQHVCDRSRRSRQVNPHGLVGFQGRYHCWCETGETRFTDTRRTNKTVA 276
R PW G E+ P + C R+ R P+G R C C + +R +
Sbjct: 169 RLPWKGGSESN-PDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKK 227
Query: 277 SPLNL 291
S NL
Sbjct: 228 SQANL 232
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 0.89
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSLVSKAGIIA 217
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 29.9 bits (64), Expect = 0.89
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NMSVIAHVDHGKSTLTDSL 193
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 122 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARPERPVSLTRE 256
KR+ ++ H D+ K+ +T + GI+ + P+ P+ T+E
Sbjct: 129 KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKE 173
>At2g05120.1 68415.m00539 expressed protein
Length = 1234
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -2
Query: 403 GESIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQRSCSSFACQ*NGSLRS 224
G+ +K L R S + ++++ +S N + + +R C + AC NG L
Sbjct: 205 GQEAAPAEKARHLIKRQSNGIRSSRA-ENSDLNSLITTAVAAAERLCIAIACSSNGELWQ 263
Query: 223 RTSNDTGLGNQRVR 182
T + TG+ + +V+
Sbjct: 264 FTCSPTGVKSNQVQ 277
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 140 MSVIAHVDHGKSTLTDSL 193
++V+ HVDHGK++L D+L
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 27.9 bits (59), Expect = 3.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 150 SLTSITASQPSRTRWFPRPVSLLV 221
S + T+++P R+RW P+P +L+
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILI 43
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 159 SITASQPSRTRWFPRPVSLLV 221
S T+++P R RW P+P +L+
Sbjct: 11 SSTSTEPVRARWSPKPEQILI 31
>At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 347
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -3
Query: 270 GLVRPSRVSETGLSGLAPAMI-PALETNESVRVDL 169
GL RP RVS++ S L+P+ I P L + ES+ + L
Sbjct: 302 GLYRPGRVSDSPRSPLSPSCISPELLSPESLGLKL 336
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 140 MSVIAHVDHGKSTLTD 187
++++ HVDHGK+TL D
Sbjct: 504 ITIMGHVDHGKTTLLD 519
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 342 TNPDQREKSEKGFLINLIDSPGHVDFSS 425
T QR E G +IN++D+PG D S+
Sbjct: 62 TCESQRVVQEDGDIINVVDTPGLFDLST 89
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 116 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 208
+KKR++ N+ I HVD GKST+ ++ +G
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG 126
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 463 KGSISDRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKS 326
+GS + S E T P + +KK LF R+ F+M KS
Sbjct: 732 QGSKEKEAETSVSNETETNPIPQVNPVKKKKKLFPRFFMFLMKKKS 777
>At1g18160.1 68414.m02256 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 992
Score = 26.6 bits (56), Expect = 8.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 463 KGSISDRSAAVTSEEKSTCPGESIKLIK----KPFSLFSRWSGFVMNTKSFSSSS 311
+GS+S+RS + E S P +S++ KPF S W V + KS SSS+
Sbjct: 23 EGSVSNRSNKSSDAEPS--PSDSLRSQDNSEFKPFLGLSNWLSSVTHRKSPSSSN 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,067,674
Number of Sequences: 28952
Number of extensions: 202480
Number of successful extensions: 636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 782033640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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