Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021039
         (758 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g69730.1 68414.m08024 protein kinase family protein contains ...    30   1.5  
At1g60470.1 68414.m06808 galactinol synthase, putative similar t...    29   2.5  

>At1g69730.1 68414.m08024 protein kinase family protein contains
           Pfam profile: PF00069 Eukaryotic protein kinase domain
          Length = 792

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +1

Query: 346 VVSDGTGMLHIVDTGPRNRSAGRNQLWHTLQSSLILG--ENKYFVIVDARIQE 498
           V S G  ++ ++ TG ++ S  R+Q   TL +  IL   ENK F I+DARI++
Sbjct: 632 VYSFGVVLVELI-TGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRD 683


>At1g60470.1 68414.m06808 galactinol synthase, putative similar to
           galactinol synthase GI:5608497 from [Ajuga reptans]
          Length = 334

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +2

Query: 83  VDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYS--FNYYYIDKNQQVRHVTFENINHTFQ 256
           ++ VYP D Q  F  A  + + N+  L  W++       Y+D + QV    F+NI+H F 
Sbjct: 81  IEPVYPPDNQVEF--AMAYYVLNYSKLRIWNFEEYSKMIYLDADIQV----FDNIDHLFD 134

Query: 257 I 259
           +
Sbjct: 135 L 135


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,109,219
Number of Sequences: 28952
Number of extensions: 332554
Number of successful extensions: 872
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)