Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0098
(685 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32190.1 68414.m03959 expressed protein 30 1.2
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 30 1.6
At3g59120.1 68416.m06591 DC1 domain-containing protein contains ... 30 1.6
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 29 2.2
At1g08280.1 68414.m00914 glycosyl transferase family 29 protein ... 29 2.9
At5g59680.1 68418.m07482 leucine-rich repeat protein kinase, put... 29 3.8
At5g42620.1 68418.m05188 expressed protein 29 3.8
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 29 3.8
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 28 5.0
At3g12680.1 68416.m01582 floral homeotic protein (HUA1) identica... 28 5.0
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 28 5.0
At1g69360.1 68414.m07960 expressed protein 28 5.0
At4g19960.1 68417.m02923 potassium transporter family protein si... 28 6.6
At2g32340.1 68415.m03953 TraB family protein contains Pfam domai... 28 6.6
At1g68140.1 68414.m07783 expressed protein 28 6.6
At1g55180.1 68414.m06303 phospholipase D, putative (PLDEPSILON) ... 28 6.6
At1g77770.2 68414.m09056 expressed protein 27 8.8
At1g77770.1 68414.m09055 expressed protein 27 8.8
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +1
Query: 202 NGTCIPQDKCPTVPCPVNEYFTNCAKGMCRQENC---TELGKLSECKTQSTELCEPGCVC 372
+G C P CP CP C G C C T G S CK S C C C
Sbjct: 298 SGLCRPSCSCPKPRCPKPSCSCGCGCGDCGCFKCSCPTLKGCFSCCKKPS---CVSSCCC 354
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 413 CP-VNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDC 589
CP + +S C++P+C S C ++ SC C C C + + C D C
Sbjct: 333 CPTLKGCFSCCKKPSCVSSCCCPTFKCSSCFGKPKCP-KCSCWKCLK------CPDTECC 385
Query: 590 ESQLC 604
S C
Sbjct: 386 RSSCC 390
Score = 27.9 bits (59), Expect = 6.6
Identities = 33/119 (27%), Positives = 36/119 (30%), Gaps = 16/119 (13%)
Frame = +1
Query: 76 CLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCP-V 252
C GLCRP K C + C GC C G C C CP +
Sbjct: 296 CCSGLCRPSCSCPKPR---CP---KPSCSCGCGC---------GDC----GCFKCSCPTL 336
Query: 253 NEYFTNCAKGMCRQENCTELGKLSEC---------------KTQSTELCEPGCVCEGGF 384
F+ C K C C K S C K TE C C C G F
Sbjct: 337 KGCFSCCKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTECCRSSCCCSGCF 395
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +2
Query: 413 CPVNEVYSSCRQPNCNSDKCEYKYRSQSCPSDEPCEVGCVCKRGF 547
CP + S +P C C ++ CP E C C C F
Sbjct: 354 CPTFKCSSCFGKPKCPKCSC---WKCLKCPDTECCRSSCCCSGCF 395
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 485 RSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRVEKC 661
++QSC PC +C + N TC ++ S+ C + C ++ CR +C
Sbjct: 601 KNQSCKQYTPCGCLSMCGKDCPCLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQC 659
>At3g59120.1 68416.m06591 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 602
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = -2
Query: 462 ELQLGCRQL-EYTSFTGHSSRSVF*SQEAPFTNAARLAQLCRLR-FTFRQLAQLCAVLLT 289
+L L C + EY + H+ VF S N A L Q C+ R + + LC +L
Sbjct: 417 QLDLNCVLVPEYFTHKSHAEHHVFISPSYSEENEA-LCQGCKKRVYNYHLHCSLCEFVLC 475
Query: 288 THALSAVREVFIHWTRHSWTL 226
+ E+ + HS TL
Sbjct: 476 YECATIPNEIHYKFDEHSLTL 496
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 277 KGMCRQEN-CTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTG 408
+ +C E +LGK K PG +C+GG +KNGTG
Sbjct: 37 RALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTG 81
>At1g08280.1 68414.m00914 glycosyl transferase family 29 protein /
sialyltransferase family protein contains Pfam profile:
PF00777 sialyltransferase (Glycosyltransferase family
29)
Length = 398
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 659 TSRPDKQLGCNLNTVHLLNKAGIHNLFHRHRCHCQPY 549
T R +K++G N + +N +H R C+C PY
Sbjct: 209 TERFEKKVGSKTN-ISFINSNILHQCGRRESCYCHPY 244
>At5g59680.1 68418.m07482 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 882
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 642 TAWMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQP-TSQGSSEGHDCDLYLYSHL 466
T W Q+ + T +S +V L+ P + P T++ SS D Y+Y+H
Sbjct: 224 TEWTQI---NTTSDVGNSNDYKPPKVALTTAAIPTNASAPLTNEWSSVNPDEQYYVYAHF 280
Query: 465 SELQ 454
SE+Q
Sbjct: 281 SEIQ 284
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 485 RSQSCPSD----EPCEVG--CVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVC 646
R++SCP++ C C+C+ GF D T + C+ Q CS++ C VC
Sbjct: 630 RNRSCPNNCNGHGKCTTQGVCICENGFTGIDCSTAI----CDEQ-CSLHGGV--CDNGVC 682
Query: 647 RVEKCSDLGG 676
+CSD G
Sbjct: 683 EF-RCSDYAG 691
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 268 NCAKGMCRQEN-CTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTG 408
N + +C EN + GK K + PG +C+GG NGTG
Sbjct: 34 NNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTG 81
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 28 IIVLCTATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEY 165
I+V+C A E ++ C +KC +D++ +L D E+C Y
Sbjct: 159 IVVVCVAYSTSLEIVHAVRKSC-VRKCTNGDDLVLLELSDVEECMY 203
>At3g12680.1 68416.m01582 floral homeotic protein (HUA1) identical
to floral homeotic protein HUA1 [Arabidopsis thaliana]
gi|16797661|gb|AAK01470
Length = 524
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 142 VDEEKCEYGCACKIGYLRDENGTCI-PQDKCPTVPC-PVNEYFTNCAK 279
+ ++C+YG CK + R+E + QD P P P+ ++ K
Sbjct: 235 IKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGK 282
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/59 (23%), Positives = 23/59 (38%)
Frame = +2
Query: 485 RSQSCPSDEPCEVGCVCKRGFRRADNGTCVDERDCESQLCSVNEQYLSCIQAVCRVEKC 661
+ Q C PC C + NGTC ++ + C + C ++ CR +C
Sbjct: 645 KDQPCRQFNPCNCKIACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQC 703
>At1g69360.1 68414.m07960 expressed protein
Length = 896
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 600 SWDSQSLSSTQVPLSALRNPLL--QTQPTSQGSSE 502
SW+++S SS Q PL NP L TQ + S+E
Sbjct: 351 SWENRSSSSVQKPLPLQANPFLTFNTQVRADSSAE 385
>At4g19960.1 68417.m02923 potassium transporter family protein
similar to potassium transporter [Arabidopsis thaliana]
gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
member, PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 842
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 327 FRQLAQLCAVLLTTHALSAVREVFIHWTRHSWTLVLRYTSSIFVSQISYFA 175
F Q + V+L T L + + + W H W LVL +T F ++SYF+
Sbjct: 485 FSQWTAVVLVMLVTTLLMVLIMLLV-WHCH-WILVLIFTFLSFFVELSYFS 533
>At2g32340.1 68415.m03953 TraB family protein contains Pfam domain
PF01963: TraB family
Length = 272
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = -2
Query: 522 TSQGSSEGHDCDLYLY--SHLSELQL-GCRQLE 433
T + ++EG CD+YL +H+S++ L CR++E
Sbjct: 85 TCESTAEGGSCDVYLVGTAHVSQVILESCREVE 117
>At1g68140.1 68414.m07783 expressed protein
Length = 334
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 211 CIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECK 333
C Q K T+ P + F N K +C QENC G E +
Sbjct: 123 CRGQVKGWTIVQPARD-FLNLKKRICMQENCVYAGTFKELR 162
>At1g55180.1 68414.m06303 phospholipase D, putative (PLDEPSILON)
identical to SP|Q9C888 Phospholipase D epsilon (EC
3.1.4.4) (AtPLDepsilon) (PLD epsilon) (PLDalpha3)
{Arabidopsis thaliana}; similar to GI:6573119 from
[Lycopersicon esculentum] (Plant Physiol. 122 (1), 292
(2000))
Length = 762
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -2
Query: 681 RDPPRSEHFST-RQTAWMQLKYCSFTEQSWDSQSLSSTQVPLSALRNPLLQTQPTSQGSS 505
R+P H S AW LK +F EQ W Q S V S +RN + T PT + +
Sbjct: 373 REPWHDCHVSVVGGAAWDVLK--NF-EQRWTKQCNPSVLVNTSGIRNLVNLTGPTEENNR 429
Query: 504 EGHDCDLYLYSHLSELQL 451
+ + L H+S ++
Sbjct: 430 KWNVQVLRSIDHISATEM 447
>At1g77770.2 68414.m09056 expressed protein
Length = 264
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/92 (27%), Positives = 34/92 (36%)
Frame = +1
Query: 91 CRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTN 270
CRP C + C +D+ + YG G C Q K TV +F N
Sbjct: 53 CRPYMCATSSRFANC--LDQYRKSYGNE-NSGQPELLCPLCRGQVKGWTVVKDARMHF-N 108
Query: 271 CAKGMCRQENCTELGKLSECKTQSTELCEPGC 366
+ C Q+NC+ LG + K E C
Sbjct: 109 SKRRTCMQDNCSFLGNFRKLKKHMKEKHPHAC 140
>At1g77770.1 68414.m09055 expressed protein
Length = 265
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/92 (27%), Positives = 34/92 (36%)
Frame = +1
Query: 91 CRPQKCIEKNDIIFCQLVDEEKCEYGCACKIGYLRDENGTCIPQDKCPTVPCPVNEYFTN 270
CRP C + C +D+ + YG G C Q K TV +F N
Sbjct: 53 CRPYMCATSSRFANC--LDQYRKSYGNE-NSGQPELLCPLCRGQVKGWTVVKDARMHF-N 108
Query: 271 CAKGMCRQENCTELGKLSECKTQSTELCEPGC 366
+ C Q+NC+ LG + K E C
Sbjct: 109 SKRRTCMQDNCSFLGNFRKLKKHMKEKHPHAC 140
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,416
Number of Sequences: 28952
Number of extensions: 381790
Number of successful extensions: 1258
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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