Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0094
(764 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 146 2e-35
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 142 3e-34
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 128 3e-30
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 91 1e-18
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 89 2e-18
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 89 4e-18
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 88 5e-18
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 88 5e-18
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 87 2e-17
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 87 2e-17
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 87 2e-17
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 86 2e-17
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 86 2e-17
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 86 3e-17
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 86 3e-17
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 86 3e-17
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 85 4e-17
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 85 4e-17
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 85 5e-17
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 1e-16
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 83 1e-16
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 81 8e-16
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 79 3e-15
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 72 5e-13
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 69 3e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 69 3e-12
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 68 6e-12
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 67 1e-11
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 66 2e-11
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 66 2e-11
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 65 4e-11
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 64 1e-10
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 64 1e-10
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 63 2e-10
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 63 2e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 62 3e-10
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 62 5e-10
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 53 2e-07
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 52 3e-07
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 46 4e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 44 8e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 43 2e-04
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 41 0.001
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 40 0.002
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 37 0.013
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 37 0.017
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 33 0.28
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 32 0.36
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 3.4
At2g37400.1 68415.m04586 chloroplast lumen common family protein... 29 4.5
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 146 bits (353), Expect = 2e-35
Identities = 62/109 (56%), Positives = 77/109 (70%)
Frame = +2
Query: 392 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPP 571
S A L + K L + PV+GF L+ E N+FEW V I GPPDTLY+GG+F A M FP
Sbjct: 3 SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQ 62
Query: 572 DYPYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERWT 718
+YP SPP++RF +++WHPNVY +G +CISILHPP DDP EL ERWT
Sbjct: 63 NYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWT 111
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 142 bits (343), Expect = 3e-34
Identities = 58/103 (56%), Positives = 75/103 (72%)
Frame = +2
Query: 410 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSP 589
L + K L ++PV+GF L+ E N+F+W V+I GPPDTLY+GG+F A M FP +YP SP
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 590 PSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERWT 718
P++ F + +WHPNVY +G +CISILHPP DDP EL ERWT
Sbjct: 70 PTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWT 112
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 128 bits (310), Expect = 3e-30
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +2
Query: 482 NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISI 661
N+FEW V I GPPDTLY+GG+F A M FP +YP SPP++RF +++WHPNVY +G +CISI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 662 LHPPVDDPQSGELPCERWT 718
LHPP DDP EL ERWT
Sbjct: 125 LHPPGDDPSGYELASERWT 143
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 90.6 bits (215), Expect = 1e-18
Identities = 37/89 (41%), Positives = 53/89 (59%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GPP++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAED-MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDIL 89
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A R + E K LQ +P GED +F W+ I GP ++ Y GG F ++ FPPDY
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGED-MFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG++C+ IL
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDIL 89
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/89 (42%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP D+ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPNV NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDIL 89
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP D+ Y GG F + FPPDY
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDIL 119
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP D+ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P + ED +F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL 89
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
++ A + L ++K LQ++P G ++N+ W IFGP DT + GG FK ++F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
DYP PP++RF++ ++HPN+Y +G +C+ IL
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
++ A + L ++K LQ++P G ++N+ W IFGP DT + GG FK ++F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
DYP PP++RF++ ++HPN+Y +G +C+ IL
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
++ A + L ++K LQ++P G ++N+ W IFGP DT + GG FK ++F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
DYP PP++RF++ ++HPN+Y +G +C+ IL
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 92
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 85.4 bits (202), Expect = 4e-17
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E + LQ +P G+D +F+W+ I GP D+ + GG F + FPPDY
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL 89
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 85.4 bits (202), Expect = 4e-17
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E + LQ +P G+D +F+W+ I GP D+ + GG F + FPPDY
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL 89
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 85.0 bits (201), Expect = 5e-17
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
T+ A + L ++K LQ++P G ++N+ W IFGP DT + GG FK + F
Sbjct: 2 TTPAKKRLMWDFKRLQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
DYP PP +RF++ ++HPN+Y +G +C+ IL
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDIL 92
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/89 (38%), Positives = 51/89 (57%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + + E K LQ++P +++F W+ I GP ++ Y GG F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ NG +C+ IL
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDIL 90
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGED-NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPS 595
EYK +Q E V ++L+ +D N+F+W I GP +T Y+GG F+ P YP PP
Sbjct: 11 EYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQ 70
Query: 596 IRFLTNVWHPNV-YENGDLCISIL 664
+RFLT ++HPNV ++ G++C+ IL
Sbjct: 71 VRFLTKIFHPNVHFKTGEICLDIL 94
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 81.0 bits (191), Expect = 8e-16
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + ++ E + +Q P + E+++F W+ I GP D+ Y GG F + F DY
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T V+HPN+ G +C+ IL
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDIL 90
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/89 (37%), Positives = 53/89 (59%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A + +A+EY+++ + E +N++EW I GP T Y+GG F +KFP DY
Sbjct: 9 AAQRIAMEYRAMISK--ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDY 66
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP F T ++HPN+ + G +C++IL
Sbjct: 67 PFKPPKFTFKTPIYHPNINDEGSICMNIL 95
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/97 (35%), Positives = 57/97 (58%)
Frame = +2
Query: 374 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKA 553
SN + ++ LA E KSL E P +G +V ++ +++ + I GP T Y+ G F+
Sbjct: 3 SNENLPPNVIKQLAKELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRM 61
Query: 554 HMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+ D+P+SPP F+T ++HPNV NG++C++ L
Sbjct: 62 KLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL 98
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +2
Query: 392 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPP 571
S+ R + E + L EP G EDN+ + V I GP + Y+GG FK + P
Sbjct: 4 SNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 572 DYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+YP + P +RFLT ++HPN+ + G +C+ IL
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +2
Query: 392 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPP 571
S+ R + E + L EP G EDN+ + V I GP + Y+GG FK + P
Sbjct: 4 SNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 572 DYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+YP + P +RFLT ++HPN+ + G +C+ IL
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +2
Query: 392 SSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPP 571
S+ R + E + L EP G E+N+ + V I GP + Y+GG FK + P
Sbjct: 4 SNLPRRIIKETQRLLSEPAPGISASP-SEENMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 572 DYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+YP + P +RFLT ++HPN+ + G +C+ IL
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = +2
Query: 374 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKA 553
+ TV + S L+ L E L G EDN+F W+ I G DT+++G ++
Sbjct: 28 TKTVDSQSVLKRLQSELMGLMMGGGPGISA-FPEEDNIFCWKGTITGSKDTVFEGTEYRL 86
Query: 554 HMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+ F DYP+ PP ++F T +HPNV G++C+ IL
Sbjct: 87 SLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDIL 123
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 68.9 bits (161), Expect = 3e-12
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A++ + E K +Q P + F + L E+N+FEW+ AI GP DT ++GG + ++ P DY
Sbjct: 12 AVKRILQEVKEMQANPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISI--LHP 670
P+ PPS LT + N +C+SI HP
Sbjct: 71 PFKPPSFMLLTP--NGRFETNTKICLSISNYHP 101
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +2
Query: 479 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCIS 658
DNL+ W I GP T Y+GG F + FP DYP+ PP + F T ++H NV GDL ++
Sbjct: 63 DNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVN 122
Query: 659 IL 664
IL
Sbjct: 123 IL 124
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 68.9 bits (161), Expect = 3e-12
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +2
Query: 479 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCIS 658
+N+F WE + GP Y+ G F + PP YPY PP I F T ++HPN+ E G++ +
Sbjct: 57 ENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVD 116
Query: 659 IL 664
IL
Sbjct: 117 IL 118
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +2
Query: 410 LALEYKSLQEEPVEGFRVKL-LGED---NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
LA E KS ++ GF K G+D NL W I G T ++GG+F M F DY
Sbjct: 10 LAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDY 69
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISILH 667
P PP +F +HPNVY +G +C+SIL+
Sbjct: 70 PSKPPKCKFPQGFFHPNVYPSGTVCLSILN 99
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 479 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYE-NGDLCI 655
D + E+ V GP D+LYQGG +K ++ P YPY PS+ F+T ++HPNV E +G +C+
Sbjct: 27 DGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCL 86
Query: 656 SILH 667
+++
Sbjct: 87 DVIN 90
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/72 (36%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 455 FRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVY 634
++V+++ D + E+ V GP D++Y+GG +K ++ P YPY PS+ F+T ++HPNV
Sbjct: 20 YKVEMIN-DGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVD 78
Query: 635 E-NGDLCISILH 667
E +G +C+ +++
Sbjct: 79 EMSGSVCLDVIN 90
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +2
Query: 374 SNTVPTSSALRALALE--YKSLQE---EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQG 538
S++ P+ AL +A K L E P GFR K+ DNL +W + + G P TLY
Sbjct: 3 SSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVT--DNLQKWTIDVTGAPGTLYAN 60
Query: 539 GYFKAHMKFPPDYPYSPPSIRFLTNV-WHPNVYENGDLCISILH 667
++ ++FP YP P + F++ HP++Y NG +C+ IL+
Sbjct: 61 ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILY 104
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/97 (34%), Positives = 51/97 (52%)
Frame = +2
Query: 374 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKA 553
+ TV + S L+ L E L G EDN+F W+ I G DT+++G ++
Sbjct: 29 TKTVDSHSVLKRLQSELMGLMMGADPGISA-FPEEDNIFCWKGTITGSKDTVFEGTEYRL 87
Query: 554 HMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+ F DYP+ P ++F T +HPNV G++C+ IL
Sbjct: 88 SLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDIL 124
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
T A L E+ Q P GF+ ++ DNL W + + G P TLY ++ ++FP
Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHRV--SDNLQRWIIEVHGVPGTLYANETYQLQVEFP 70
Query: 569 PDYPYSPPSIRFLTNV-WHPNVYENGDLCISILH 667
YP P + F HP++Y NG +C+ +L+
Sbjct: 71 EHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLY 104
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A L E Q P GF+ K+ DNL W + + G P TLY ++ + FP Y
Sbjct: 16 ATNRLQKELVEWQMNPPTGFKHKVT--DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHY 73
Query: 578 PYSPPSIRFLTNV-WHPNVYENGDLCISILH 667
P P + FL HP++Y NG +C+ IL+
Sbjct: 74 PMESPQVIFLHPAPLHPHIYSNGHICLDILY 104
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 479 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYE-NGDLCI 655
D+L + V GP D+LYQGG +K ++ P YPY PS+ F+ ++HPNV E +G +C+
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 656 SILH 667
+++
Sbjct: 87 DVIN 90
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 494 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+ V I GP + Y+GG FK + P +YP + P +RFLT ++HPN+ + G +C+ IL
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 60
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
A L E Q P GF+ ++ DNL +W + + G P TLY + ++FP Y
Sbjct: 16 ACNRLQKELSEWQVNPPTGFKHRVT--DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHY 73
Query: 578 PYSPPSIRFLTNV-WHPNVYENGDLCISILH 667
P P + F+ HP++Y NG +C+ IL+
Sbjct: 74 PMEAPQVIFVPPAPLHPHIYSNGHICLDILY 104
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 479 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNV-YENGDLCI 655
DNL I GP T Y+GG F+ + P YP+ PP ++F T VWHPN+ ++G +C+
Sbjct: 30 DNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICL 89
Query: 656 SIL 664
IL
Sbjct: 90 DIL 92
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +2
Query: 497 EVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISILHPP 673
+ I GP DT+Y G F ++ P YP+ PP + F T ++HPN+ +G +C+ IL+ P
Sbjct: 48 DAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP 106
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/97 (30%), Positives = 48/97 (49%)
Frame = +2
Query: 395 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPD 574
+ ++ L EY++L +EPV V +++ EW + G T + GG++ +KFPP+
Sbjct: 5 ACIKRLQKEYRALCKEPVSHV-VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 575 YPYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDP 685
YPY PP I T + L +S HP +P
Sbjct: 64 YPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNP 100
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 395 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPD 574
+ ++ L EY++L +EPV V +++ EW + G T + GG++ +KFPP+
Sbjct: 5 ACIKRLQKEYRALCKEPVSHV-VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 575 YPYSPPSIRFLT 610
YPY PP I T
Sbjct: 64 YPYKPPGITMTT 75
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 598
++K LQ +G V+ ED + I G T YQ G F P DYP PPS
Sbjct: 858 DWKILQNNLPDGIFVRAY-EDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSA 916
Query: 599 RFLTNVW--HPNVYENGDLCISILH 667
+ + W +PN+YE G +C+S+L+
Sbjct: 917 YYHSGGWRLNPNLYEEGKVCLSLLN 941
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
T S ++ + E+ +L+ V++ E+ + A+ G P T Y G F + P
Sbjct: 660 TKSWVKKVQQEWSNLEANLPNTIYVRVC-EERMDLLRAALVGAPGTPYHDGLFFFDIMLP 718
Query: 569 PDYPYSPPSIRFLTNVW--HPNVYENGDLCISILH 667
P YP+ PP + + + +PN+YE+G +C+S+L+
Sbjct: 719 PQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 473 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLC 652
G+++L +EV I P + Y G F + YP+ P ++ T V+HPN+ G++C
Sbjct: 56 GKNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVC 114
Query: 653 ISIL 664
++IL
Sbjct: 115 LNIL 118
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 494 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GPP+T Y+G F+ + +YP SPP++RF T +
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 401 LRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYP 580
++ + ++K L+ + E V+ E + I G T Y G F ++FP YP
Sbjct: 273 VKKVQADWKILENDLPEAISVRAC-ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYP 331
Query: 581 YSPPSIRFLTNVW--HPNVYENGDLCISIL 664
PP++ + + +PN+Y G +C+S+L
Sbjct: 332 SVPPNVHYHSGGLRINPNLYNCGKVCLSLL 361
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 598
E+K L + E V+ E + I G T Y G F ++FP YP PP +
Sbjct: 613 EWKILDKNLPETIFVRAC-ESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKV 671
Query: 599 RFLTNVW--HPNVYENGDLCISIL 664
+ + +PN+Y+ G +C+S++
Sbjct: 672 HYHSGGLRINPNLYKCGKVCLSLI 695
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 598
E+K L + E V+ E + I G T Y G F ++FP YP PP++
Sbjct: 925 EWKILNQNLPETIFVRAC-ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNV 983
Query: 599 RFLTNVW--HPNVYENGDLCISI 661
+ + +PN+Y G + +SI
Sbjct: 984 YYHSGGLRINPNLYNCGKVLVSI 1006
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 494 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GP +T Y+G F+ + DYP SPP++RF + +
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +2
Query: 419 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 598
E++ L+++ E V+ E + I G T Y G F + FP YP +PP +
Sbjct: 340 EWRILEKDLPEMIFVRAY-ESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIV 398
Query: 599 RFLTNVW--HPNVYENGDLCISIL 664
+ + +PN+Y G +C+S+L
Sbjct: 399 HYHSGGLRINPNLYNCGKVCLSLL 422
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 494 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GP +T+++G ++ + DYP PP++RF + V
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 494 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GP +T+++G ++ + DYP PP++RF + +
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 494 WEVAIFGPPD-TLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GP + T+++G ++ + DYP PP++RF + V
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 494 WEVAIFGPPD-TLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
W I GP + T+++G ++ + DYP PP++RF + +
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 509 FGPPDTLYQGGYFKAHMKFPPDYPYSPP 592
+ PP + GGY+ K +YPY+PP
Sbjct: 90 YRPPPSSSSGGYYYPPPKSGGNYPYTPP 117
>At2g37400.1 68415.m04586 chloroplast lumen common family protein
very similar to GI:6729507 (At5g02590) and GI:7413648
(At3g53560) [Arabidopsis thaliana]
Length = 333
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 286 HVSTRHFNSSQ*QRTRNFGKHSIDTAASTSTCHTLQTSTLKS 161
H+S HF+SS ++ +F S+ + S+ C +++ S+ KS
Sbjct: 15 HLSFTHFSSSFPKKPSSFSLRSLPRSTSSFKCISIKASSSKS 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,744,518
Number of Sequences: 28952
Number of extensions: 406687
Number of successful extensions: 1095
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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