Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0086
         (682 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g45240.1 68415.m05632 methionyl aminopeptidase, putative / me...   134   4e-32
At1g13270.2 68414.m01540 metallopeptidase M24 family protein sim...   133   1e-31
At1g13270.1 68414.m01541 metallopeptidase M24 family protein sim...   133   1e-31
At4g37040.1 68417.m05246 metallopeptidase M24 family protein sim...   132   3e-31
At3g25740.1 68416.m03205 metallopeptidase M24 family protein sim...   127   6e-30
At5g65980.1 68418.m08307 auxin efflux carrier family protein con...    29   2.8  
At1g69970.1 68414.m08053 CLE26, putative CLAVATA3/ESR-Related 26...    27   8.7  

>At2g45240.1 68415.m05632 methionyl aminopeptidase, putative /
           methionine aminopeptidase, putative / peptidase M,
           putative similar to SP|Q01662 Methionine aminopeptidase
           1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 398

 Score =  134 bits (325), Expect = 4e-32
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
 Frame = +1

Query: 187 YETTPSRVVPDTIERPDYLARGKQLTLPC-----LPEIKDDNQLKGMRTSCKLASTILSQ 351
           Y  +  RVVP  IE+PD+   G     P      + EIK   Q++ MR +CK+A  +L  
Sbjct: 104 YPISTKRVVPAEIEKPDWAIDGTPKVEPNSDLQHVVEIKTPEQIQRMRETCKIAREVLDA 163

Query: 352 VQNFIKPGVTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLS 531
               I PGVTTD+ID++VH   I AG YPSPL+Y  FPKS CTSVN V  HGIPD R L 
Sbjct: 164 AARVIHPGVTTDEIDRVVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLE 223

Query: 532 DGDIVNVDITV 564
           DGDIVNVD+TV
Sbjct: 224 DGDIVNVDVTV 234


>At1g13270.2 68414.m01540 metallopeptidase M24 family protein
           similar to SP|Q01662 Methionine aminopeptidase 1
           precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 283

 Score =  133 bits (321), Expect = 1e-31
 Identities = 60/125 (48%), Positives = 83/125 (66%)
 Frame = +1

Query: 196 TPSRVVPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPG 375
           +P  +VPD I RP Y+  G    +    +I     +  MR +C+LA+ +L+     +KP 
Sbjct: 97  SPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPS 156

Query: 376 VTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVD 555
           VTT++ID+ VH +II+AGAYPSPL Y GFPKS+CTSVN    HGIPD R L  GDI+N+D
Sbjct: 157 VTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINID 216

Query: 556 ITVFM 570
           +TV++
Sbjct: 217 VTVYL 221


>At1g13270.1 68414.m01541 metallopeptidase M24 family protein
           similar to SP|Q01662 Methionine aminopeptidase 1
           precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 369

 Score =  133 bits (321), Expect = 1e-31
 Identities = 60/125 (48%), Positives = 83/125 (66%)
 Frame = +1

Query: 196 TPSRVVPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPG 375
           +P  +VPD I RP Y+  G    +    +I     +  MR +C+LA+ +L+     +KP 
Sbjct: 97  SPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPS 156

Query: 376 VTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVD 555
           VTT++ID+ VH +II+AGAYPSPL Y GFPKS+CTSVN    HGIPD R L  GDI+N+D
Sbjct: 157 VTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINID 216

Query: 556 ITVFM 570
           +TV++
Sbjct: 217 VTVYL 221


>At4g37040.1 68417.m05246 metallopeptidase M24 family protein
           similar to SP|O33343 Methionine aminopeptidase (EC
           3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 350

 Score =  132 bits (318), Expect = 3e-31
 Identities = 61/125 (48%), Positives = 83/125 (66%)
 Frame = +1

Query: 196 TPSRVVPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPG 375
           +P R VP  I +P Y+   +   +    E+ D   ++ MR S  LA+ +       +KPG
Sbjct: 78  SPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPG 137

Query: 376 VTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVD 555
           VTTD+ID+ VH++II+ GAYPSPL Y GFPKS+CTSVN    HGIPD RPL DGDI+N+D
Sbjct: 138 VTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINID 197

Query: 556 ITVFM 570
           +TV++
Sbjct: 198 VTVYL 202


>At3g25740.1 68416.m03205 metallopeptidase M24 family protein
           similar to SP|O33343 Methionine aminopeptidase (EC
           3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 344

 Score =  127 bits (307), Expect = 6e-30
 Identities = 57/125 (45%), Positives = 82/125 (65%)
 Frame = +1

Query: 196 TPSRVVPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQVQNFIKPG 375
           +P   VPD I +P Y+   K   +    +I D   +  M+ +C+LA+ +L      ++P 
Sbjct: 70  SPRLSVPDHILKPLYVESSKVPEISSELQIPDSIGIVKMKKACELAARVLDYAGTLVRPF 129

Query: 376 VTTDDIDQLVHSLIIKAGAYPSPLHYKGFPKSICTSVNNVAVHGIPDLRPLSDGDIVNVD 555
           VTTD+ID+ VH ++I+ GAYPSPL Y GFPKS+CTSVN    HGIPD RPL +GDI+N+D
Sbjct: 130 VTTDEIDKAVHQMVIEFGAYPSPLGYGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINID 189

Query: 556 ITVFM 570
           + V++
Sbjct: 190 VAVYL 194


>At5g65980.1 68418.m08307 auxin efflux carrier family protein
           contains auxin efflux carrier domain, Pfam:PF03547
          Length = 395

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +1

Query: 190 ETTPSRVVPDTIERPDYLARGKQLTLPCLPEIKDDNQLKGMRTSCKLASTILSQV 354
           E  P RV+ D+++    L  G   T+PC+  I   N ++G+R+S    S I+  +
Sbjct: 260 ENAPLRVIQDSVK---LLGEG---TIPCITLILGGNLIQGLRSSAVKKSVIVGVI 308


>At1g69970.1 68414.m08053 CLE26, putative CLAVATA3/ESR-Related 26
           (CLE26);
          Length = 118

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +1

Query: 286 KDDNQLKGMRTSCKLASTILSQVQNFIKPGVTTDDIDQLVHSLIIKAGAYPSPLH 450
           K+D++ K + T+  + ++   ++Q  ++ G   DD+  +     +  G  P P+H
Sbjct: 36  KEDDKTKEITTAVNMNNSDAKEIQQELEDGSRNDDLSYVASKRKVPRG--PDPIH 88


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,001,165
Number of Sequences: 28952
Number of extensions: 288700
Number of successful extensions: 612
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)