Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0078
(658 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 137 7e-33
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 136 2e-32
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 135 2e-32
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 124 5e-29
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 111 5e-25
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 99 1e-21
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 45 4e-05
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 35 0.041
At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing ... 34 0.096
At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing ... 34 0.096
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 31 0.89
At1g18740.1 68414.m02337 expressed protein 31 0.89
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 2.1
At5g52440.1 68418.m06507 HCF106 protein identical to HCF106 [Ara... 29 3.6
At5g07360.1 68418.m00840 amidase family protein low similarity t... 29 3.6
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 29 3.6
At4g32750.1 68417.m04660 expressed protein 28 4.8
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 137 bits (331), Expect = 7e-33
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Frame = +2
Query: 38 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 208
MAPI VGD +P + E+ ++ L AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 209 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 388
+ A++LKS GV EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 389 LG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 502
G G RS+RF++++ D KV NVE G + S AD I
Sbjct: 121 KGLGVRSRRFALLLDDLKVTVANVESGGE-FTVSSADDI 158
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 136 bits (328), Expect = 2e-32
Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Frame = +2
Query: 38 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 208
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 209 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 388
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 389 LG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIK 505
G G RS+RF++++ + KV NVE G S D +K
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILK 160
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 135 bits (327), Expect = 2e-32
Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Frame = +2
Query: 38 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 208
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 209 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 388
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 389 LG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIK 505
G G RS+RF++++ + KV NVE G S D +K
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILK 160
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 124 bits (299), Expect = 5e-29
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 7/162 (4%)
Frame = +2
Query: 41 APIKVGDQLPAADLFEDSPAN----KVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 208
A I VGD+LP + L P+ V + LTAGKK +LFAVPGAFTP CS+ H+PG+V
Sbjct: 71 ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFV 130
Query: 209 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNL-- 382
A +L+S G+ I C+SVND +VM AW +V +L+D +G F L + +L
Sbjct: 131 SKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRD 190
Query: 383 PPLG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIK 505
P+G G RS+R++++ D V+ LN+E G + S D +K
Sbjct: 191 KPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLK 232
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 111 bits (266), Expect = 5e-25
Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Frame = +2
Query: 38 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 208
MAPI VGD +P + +D V++ L AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 209 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 388
+ A++LKS+GV EI+C+S +DP+++ A + V+ + D SG +I+ L L +
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQLLGLELEVKD 116
Query: 389 LG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKV 508
G G RS+ F++++ + KV +NV G+G CSL +K+
Sbjct: 117 KGLGVRSRGFALLLDNLKVIVVNV---GSGGDCSLFQLMKM 154
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 99 bits (238), Expect = 1e-21
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Frame = +2
Query: 113 ICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW 292
+ ++ GKKVV+F +PGA+T CS+ H+P Y + DK K+ G+ ++CVSVNDP+ + W
Sbjct: 67 LSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
Query: 293 GAQHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIVDSKVQDLNVE 460
+ K + D G F K+L L +L L G RS+R+S + D KV+ +NVE
Sbjct: 127 AEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVE 183
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 45.2 bits (102), Expect = 4e-05
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Frame = +2
Query: 38 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 217
M I +GD +P ++ ++ +K + + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 218 DKLKSDGVAEIVCVSVNDPYVMAAW-----GAQHNTKGKVRMLADPSGNFIKALDLGTNL 382
+ GV +++ +S +D W H +K ++ADP+ I L++ +
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNM---I 113
Query: 383 PPLGGFRSKRFSMVIVDSKVQDLNVEPDGTG 475
P+ S+ +V DSK++ + P TG
Sbjct: 114 DPIENGPSRALHIVGPDSKIKLSFLYPSTTG 144
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 35.1 bits (77), Expect = 0.041
Identities = 33/116 (28%), Positives = 57/116 (49%)
Frame = +2
Query: 11 ASTSHSQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 190
+S+S L A + G P L +D V++ + GK VVL+ P TPGC+K
Sbjct: 57 SSSSLKGLIFAKVNKGQAAPDFTL-KDQNGKPVSLKKYK-GKPVVLYFYPADETPGCTK- 113
Query: 191 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIK 358
+ + +K K G AE++ +S +D A+ +++ K +L+D GN ++
Sbjct: 114 QACAFRDSYEKFKKAG-AEVIGISGDDSASHKAFASKY--KLPYTLLSD-EGNKVR 165
>At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 420
Score = 33.9 bits (74), Expect = 0.096
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 280 DGGLGSSAQH*RKGAYASRSQRQLHQGSGPGHQSAAARRFPLQKVLDGHR*QQGPRSECG 459
DGG ++ KG + +RQ HQG G GH +A++ P ++ + GPR G
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQG-GNGHGTASSSSHPNYHPVEVSKRPPGPRMPDG 396
Query: 460 AR 465
R
Sbjct: 397 TR 398
>At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 422
Score = 33.9 bits (74), Expect = 0.096
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 DGGLGSSAQH*RKGAYASRSQRQLHQ-GSGPGHQSAAARRFPLQKVLDGHR*QQGPRSEC 456
DGG ++ KG + +RQ HQ G+G GH +A++ P ++ + GPR
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPD 397
Query: 457 GAR 465
G R
Sbjct: 398 GTR 400
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = -2
Query: 363 RALMKLPLGSASIRTFPLVLC*APQAAITYGSLTDTHTISATPSDFSLSAFCTYPGKCVL 184
R +++ G+ ++ + P C A + GS +D S S L++ C++ G +L
Sbjct: 4 RGRLEIQSGTCNVCSAPCSSCMHHNAEFS-GSKSDES--SDENSHGVLASQCSFNGDNLL 60
Query: 183 EHPGVKAPGTANNTT 139
GV APG+++NT+
Sbjct: 61 RSSGVNAPGSSHNTS 75
>At1g18740.1 68414.m02337 expressed protein
Length = 382
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 504 LILSAREQDRPVPSGSTFRSWTLLSTMTIENLLERKPPSGGRLVPRSRA 358
+++SA + RP+ G R+ L + I L E+ PSG L R+R+
Sbjct: 138 IVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNLAHRNRS 186
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 CVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIV 430
C + +V ++W NT+ + +L + I DL TNL P L + R +
Sbjct: 1636 CSQATEDFVGSSWDELKNTRQALVLLVTEQKSTITYDDLTTNLCPALSTQQLYRICTLCK 1695
Query: 431 DSKVQDLNVEPD 466
+D NV PD
Sbjct: 1696 IDDHEDQNVSPD 1707
>At5g52440.1 68418.m06507 HCF106 protein identical to HCF106
[Arabidopsis thaliana] GI:4894914; contains Pfam profile
PF02416: mttA/Hcf106 family
Length = 260
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 339 PAATSSRLWTWAPICRRSEVSAPKGSRWSSLTARSK 446
P T S L+++ P+ R + S P S W SL S+
Sbjct: 15 PTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSR 50
>At5g07360.1 68418.m00840 amidase family protein low similarity to
enantiomerase-selective amidase [Rhodococcus sp.]
GI:152052; contains Pfam profile PF01425: Amidase
Length = 659
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -2
Query: 390 SGGRLVPRSRALMKLPLGS--ASIRTFPLVLC*APQAAITYGSLTDTHTISATPSDFSLS 217
S G S ++ +GS A T+P C T+GS+ T +S + S L
Sbjct: 349 SAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLG 408
Query: 216 AFCTYPGKCVLEHPGVK 166
FC C + +K
Sbjct: 409 PFCRTAADCAVILDAIK 425
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 83 FEDSPANKVNICELTAGKKVVLFAVPGAFTPG 178
F+DSP N++ I EL +V A+ G+F G
Sbjct: 199 FDDSPVNRMTIKELREQVMLVANAISGSFEKG 230
>At4g32750.1 68417.m04660 expressed protein
Length = 293
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 631 REKDKLRKV-RASLKVTNAGKIALISFLCYLILQCDITHCLLHF 503
+E + LR+ RA +K+ +++++FLC++I C I + F
Sbjct: 16 QEYESLREEDRAWIKLQRPTLVSIVAFLCFVIFTCTIVSLKIVF 59
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,636,187
Number of Sequences: 28952
Number of extensions: 333451
Number of successful extensions: 897
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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