Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0061
(723 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 34 0.083
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 34 0.083
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 34 0.11
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 34 0.11
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 34 0.11
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 33 0.19
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 32 0.44
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 31 0.58
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 31 1.0
At1g26650.1 68414.m03245 expressed protein 29 4.1
At5g55960.1 68418.m06979 expressed protein 28 5.5
At4g04930.1 68417.m00717 fatty acid desaturase family protein si... 28 7.2
At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family p... 28 7.2
At4g16295.1 68417.m02472 self-incompatibility protein-related si... 27 9.5
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 34.3 bits (75), Expect = 0.083
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 31 AFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTAS 186
A FGEG+HN HH F + R L +++T + F +G A D+K S
Sbjct: 309 ALAFGEGWHNNHHAFEFSAR-HGLEWWQLDMTWYVVKFLQAIGLATDVKLPS 359
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 34.3 bits (75), Expect = 0.083
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 34 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 177
FT GE +HN HH F R L ++LT I FF +G A D+K
Sbjct: 239 FTMGESWHNNHHAFEASAR-HGLEWYQVDLTWYLICFFQALGLATDVK 285
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 34 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 213
FT GE +HN HH F R L I++T I F +G A D+K S +K AL
Sbjct: 239 FTMGESWHNNHHAFESSAR-QGLEWWQIDITWYLIRLFEVLGLATDVKLPSEIQKQKLAL 297
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 34 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 213
FT GE +HN HH F R L I++T I F +G A D+K S +K AL
Sbjct: 240 FTMGESWHNNHHAFESSAR-QGLEWWQIDITWYLIRLFEVLGIATDVKLPSELQKQKMAL 298
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 34 FTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 177
FT GE +HN HH F R L ++LT I FF +G A D+K
Sbjct: 239 FTMGESWHNNHHAFEASAR-HGLEWYQVDLTWYLIWFFQVLGLATDVK 285
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 28 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLK 177
+ F+FGE +HN HH F R L I+++ + FF +G A D+K
Sbjct: 245 SVFSFGESWHNNHHAFESSAR-QGLEWWQIDISWYIVRFFEIIGLATDVK 293
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 28 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKR 207
+ F+FGE +HN HH F R L I+++ + F +G A D+K S + +
Sbjct: 243 SVFSFGESWHNNHHAFESSAR-QGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRM 301
Query: 208 AL 213
A+
Sbjct: 302 AM 303
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 37 TFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 213
T GEG+HN HH F + R L +++T I F +G A ++K + ++ +AL
Sbjct: 234 TLGEGWHNNHHAFEFSAR-HGLEWWQLDITWCLIRFLEAIGLATNVKLPTETQMKGKAL 291
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 37 TFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALR 216
T GE +HN HH F R L +++T I FF +G A ++K + K A+R
Sbjct: 240 TMGESWHNNHHAFETSAR-HGLEWYQLDITWYLIWFFQALGLATNVKLPTDAQKRKMAIR 298
>At1g26650.1 68414.m03245 expressed protein
Length = 335
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 523 FPSFVTVILLSK-AFVYFIEYEFLNAI*AFLSYIKIISPYW 642
FP F+TV LLSK A VY ++ + + ++ I+ W
Sbjct: 111 FPVFITVSLLSKAAVVYSVDCSYSREVVDISKFLVILQKIW 151
>At5g55960.1 68418.m06979 expressed protein
Length = 648
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 478 LVIKGTLLYLHKRVKFPSFVTVILLSKAFVYFIEYEFLNAI*AFLSYIKIISPYW 642
L I G LL + F +T +L +Y I + +++ + AF+S + I PYW
Sbjct: 501 LAISGVLLATAEIAFFQGCLTWLLFR---LYNIHFLYMSTVLAFISALLPIFPYW 552
>At4g04930.1 68417.m00717 fatty acid desaturase family protein
similar to D. melanogaster Des-1 protein, GenBank
accession number X94180; contains Pfam profile PF00487
Fatty acid desaturase domain
Length = 332
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 19 GMANAFTFGEGFHNYHHVFP 78
G N T+ G+HN HH FP
Sbjct: 259 GPLNLLTWSVGYHNEHHDFP 278
>At3g11397.1 68416.m01389 prenylated rab acceptor (PRA1) family
protein contains Pfam profile PF03208: PRA1 family
protein
Length = 209
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = +3
Query: 231 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLLK*LFLI 386
L+ +W+ +S FF+ + F F K + + + YY +Y + +F++
Sbjct: 15 LREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFILFVFVL 66
>At4g16295.1 68417.m02472 self-incompatibility protein-related
similar to self-incompatibility [Papaver nudicaule]
GI:3097262
Length = 151
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 28 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTN 192
N F++ G + H F W Y + G +N+ + F GW + TA T+
Sbjct: 75 NRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDVILFHRCGWKNCIWTAKTD 129
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,285,410
Number of Sequences: 28952
Number of extensions: 284744
Number of successful extensions: 588
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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