Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C15
         (596 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g15860.2 68418.m01856 expressed protein                             39   0.002
At5g15860.1 68418.m01855 expressed protein                             39   0.002
At3g02410.1 68416.m00228 hypothetical protein weak similarity to...    36   0.021
At1g26120.1 68414.m03188 esterase-related contains similaity to ...    32   0.25 
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c...    31   0.44 
At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pin...    30   1.0  
At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pin...    29   1.8  
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ...    28   4.1  
At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pin...    28   4.1  
At3g57240.1 68416.m06372 beta-1,3-glucanase (BG3) almost identic...    27   7.2  
At1g05020.1 68414.m00503 epsin N-terminal homology (ENTH) domain...    27   7.2  
At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pin...    27   9.5  
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont...    27   9.5  
At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pin...    27   9.5  
At1g19190.1 68414.m02389 expressed protein contains similarity t...    27   9.5  

>At5g15860.2 68418.m01856 expressed protein
          Length = 299

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +3

Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
           PV++++  G +   +     + G     ++D+++  ++YR    G +S  D +   + G+
Sbjct: 156 PVVVFVTGGAWIIGYKAWGSLLGMQ-LAERDIIVACLDYRNFPQGTIS--DMVTDASQGI 212

Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISVMLHMISPMSKGLFHRGISISASPV 548
                   ++  NI+ FGGDPN + + G SAG+      ++   +K L    IS + S +
Sbjct: 213 S-------FVCNNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKELKGESISWTVSQI 265


>At5g15860.1 68418.m01855 expressed protein
          Length = 427

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +3

Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
           PV++++  G +   +     + G     ++D+++  ++YR    G +S  D +   + G+
Sbjct: 156 PVVVFVTGGAWIIGYKAWGSLLGMQ-LAERDIIVACLDYRNFPQGTIS--DMVTDASQGI 212

Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISVMLHMISPMSKGLFHRGISISASPV 548
                   ++  NI+ FGGDPN + + G SAG+      ++   +K L    IS + S +
Sbjct: 213 S-------FVCNNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKELKGESISWTVSQI 265


>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
           kynurenine formamidase [Mus musculus] GI:21552719
          Length = 422

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +3

Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
           PV++++  G +   +     + G     ++D+++  ++YR    G +S         + +
Sbjct: 151 PVVVFVTGGAWIIGYKAWGSLLGLQ-LAERDIIVACLDYRNFPQGTIS---------DMV 200

Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGS 467
            D    + ++  NI+ FGGDPN + + G SAG+
Sbjct: 201 SDAAQGISFVCNNISAFGGDPNRIYLMGQSAGA 233


>At1g26120.1 68414.m03188 esterase-related contains similaity to
           esterase 6 GI:606998 from [Drosophila simulans] and
           esterase GI:12584120 from [Sphingomonas elodea]
          Length = 476

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +3

Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
           PV+ ++  G +   +     + G     ++D+++  I+YR    G +S         + +
Sbjct: 207 PVVAFVTGGAWIIGYKAWGSLLGQQ-LSERDIIVACIDYRNFPQGSIS---------DMV 256

Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGS 467
           KD    + ++  +IA +GGDP+ + + G SAG+
Sbjct: 257 KDASSGISFVCNHIAEYGGDPDRIYLMGQSAGA 289


>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
           component I-2 (ASA2) identical to SP|P32069
          Length = 621

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 554 LVNW*RANRDTAVEETFRHG*NHMQHHTDR 465
           +++W R ++D +VEE FR G N ++  T R
Sbjct: 258 VIHWVRIDKDRSVEENFREGMNRLESLTSR 287


>At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 329

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +3

Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLD-----KDVVLVTINYRLATLGFMSTGDELAPG 356
           P+++Y H GGF   T  S     H FL       D V V+++YR A    + T  +    
Sbjct: 75  PLLVYFHGGGFLVETAFSPTY--HTFLTAAVSASDCVAVSVDYRRAPEHPIPTSYD---- 128

Query: 357 NNGMKDQVMAMRWIQRNIAGFGGD 428
                D   A++W+  +IAG G +
Sbjct: 129 -----DSWTALKWVFSHIAGSGSE 147


>At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873; contains an
           esterase/lipase/thioesterase active site serine domain
           (prosite: PS50187)
          Length = 312

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +3

Query: 135 EDCLTINVYTXXXXXXXXYPVILYIHAGGFYAFTGRSDVAGPHYFLDKDV-----VLVTI 299
           E  L++ +Y          P+++Y H GGF   T  S     H FL   V     + +++
Sbjct: 50  EKNLSLRIYLPEKVTVKKLPILIYFHGGGFIIETAFSPPY--HTFLTSAVAAANCLAISV 107

Query: 300 NYRLA 314
           NYR A
Sbjct: 108 NYRRA 112


>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 215

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 432 NCVTITGCSAGSISVMLHMISPMSKGLFHRGISISASPVNKNR 560
           N  T T CS+ SIS   H   P +KG     ++   S  N+ R
Sbjct: 4   NLSTPTSCSSSSISSSSHEAIPRTKGKTKEEVTAEPSKENQQR 46


>At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 324

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
 Frame = +3

Query: 126 YVDEDCLTINVYT---XXXXXXXXYPVILYIHAGGFYAFTGRSDVAGPHYFLDKDV---- 284
           Y  ++ L++ +Y             P+++Y H GGF   T  S     H FL   V    
Sbjct: 47  YSADNNLSVRIYLPEKAAAETDSKLPLLVYFHGGGFIIETAFSPTY--HTFLTTSVSASN 104

Query: 285 -VLVTINYRLATLGFMSTGDELAPGNNGMKDQVMAMRWIQRNIAGFG--------GDPNC 437
            V V+++YR A            P +    D   A++W+  +I G G         D + 
Sbjct: 105 CVAVSVDYRRA---------PEHPISVPFDDSWTALKWVFTHITGSGQEDWLNKHADFSR 155

Query: 438 VTITGCSAGSISVMLHMISPMSKGLFHRGIS 530
           V ++G SAG+ +++ HM    +K     G++
Sbjct: 156 VFLSGDSAGA-NIVHHMAMRAAKEKLSPGLN 185


>At3g57240.1 68416.m06372 beta-1,3-glucanase (BG3) almost identical
           to beta-1,3-glucanase  GI:553038 from [Arabidopsis
           thaliana]
          Length = 278

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 300 NYRLATLGFMSTGDELAPGNNGMKDQVMAMRWIQRNIAGFG 422
           NY   T  ++S G+E+ P +      + AM+ I+R ++  G
Sbjct: 50  NYANVTFRYISVGNEVQPSDQAASFVLPAMQNIERAVSSLG 90


>At1g05020.1 68414.m00503 epsin N-terminal homology (ENTH)
           domain-containing protein / clathrin assembly
           protein-related Similar to clathrin assembly protein
           gb|X68878 (AP180) from Rattus norvegicus;  contains Pfam
           PF01417: ENTH domain. ENTH (Epsin N-terminal homology)
           domain;  EST gb|W43552 comes from this gene
          Length = 653

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 121 ITMWMKIVSRSMCTRPTTNRRSH 189
           IT W K++ R++ TRPT + +++
Sbjct: 211 ITYWQKLLDRAIATRPTGDAKAN 233


>At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 344

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = +3

Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLA 314
           P+++Y H GGF    G +  +  H FL         V+V++NYRLA
Sbjct: 93  PLLVYFHGGGF--CVGSAAWSCYHDFLTSLAVKARCVIVSVNYRLA 136


>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
           contains Pfam domain PF00098: Zinc knuckle; identical to
           cDNA CAX-interacting protein 4 GI:27651998
          Length = 332

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 284 RARHYQLSSSNSRLYEYGR--RTRTRQQRNEGPGDGDAMDTAEHRRVRWRSQ 433
           R+ H + S S S   E GR  R + R+ R     D D  +  + RRV+ +S+
Sbjct: 208 RSSHKRRSLSESEDEEEGRSKRRKERRGRKRDEDDSDESEDEDDRRVKRKSR 259


>At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 314

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +3

Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLA 314
           P++LY H G F      +     H  L+K     +V+ V++NYRLA
Sbjct: 73  PLMLYFHGGAF--LISSTSFPSYHTSLNKIVNQANVIAVSVNYRLA 116


>At1g19190.1 68414.m02389 expressed protein contains similarity to
           anther-specific and pathogenesis response protein
           (PrMC3) GI:5487873 from [Pinus radiata]
          Length = 318

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +3

Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLA 314
           P+++Y H GGF   T  S +   H FL       D + V++ YR A
Sbjct: 73  PLLVYFHGGGFIMETAFSPIY--HTFLTSAVSATDCIAVSVEYRRA 116


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,759
Number of Sequences: 28952
Number of extensions: 313883
Number of successful extensions: 730
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)