Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C14
(571 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1) id... 33 0.13
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.72
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.72
At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protei... 31 0.72
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 29 1.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 3.8
At5g18260.1 68418.m02146 expressed protein 28 5.0
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 27 6.7
At2g48140.1 68415.m06026 protease inhibitor/seed storage/lipid t... 27 6.7
At5g38460.1 68418.m04649 ALG6, ALG8 glycosyltransferase family p... 27 8.8
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 27 8.8
>At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1)
identical to gi:6503088 (GB:AAF14583) from [Arabidopsis
thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494
(2000)); contains Pfam profile PF01419 jacalin-like
lectin domain
Length = 174
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 121 EYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGKAGYTRQF 261
EYYK+ H R + ++ N FGT G ++D K G + QF
Sbjct: 85 EYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQF 131
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.7 bits (66), Expect = 0.72
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 416 VFRLFALLISRAAFAFLLDQSNLPPK-FEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPA 240
V+ LFA L+S+ FA + K + +SP P PS+ P SS Y
Sbjct: 9 VWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTP---PSHTPPSSNCGSPPYDP 65
Query: 239 LPNNPSSFCPSVPNTFPLPMFLSH 168
P+ PS PS P+ P P SH
Sbjct: 66 SPSTPSH--PSPPSHTPTPSTPSH 87
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.7 bits (66), Expect = 0.72
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 416 VFRLFALLISRAAFAFLLDQSNLPPK-FEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPA 240
V+ LFA L+S+ FA + K + +SP P PS+ P SS Y
Sbjct: 9 VWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTP---PSHTPPSSNCGSPPYDP 65
Query: 239 LPNNPSSFCPSVPNTFPLPMFLSH 168
P+ PS PS P+ P P SH
Sbjct: 66 SPSTPSH--PSPPSHTPTPSTPSH 87
>At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 487
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 209 SDKMTMDYSVK-LDTRGSFSMTIAVSWKGKHTAPGFWVRQATPQTSEAGWIGLIRMQTLP 385
SD + +D SVK L + F I++S + PG ++ +EA + + +P
Sbjct: 391 SDVLQVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKYREKMP 450
Query: 386 LISAKQIGGRPNLSAS 433
L++ I RP +++S
Sbjct: 451 LVATSPISDRPPITSS 466
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 359 QSNLPPKFEVSPAGPKTLVPY---ACPSNLPRSSLKNCRVYPALPNNPS 222
+ N P VS + PK LVPY C S KN +Y P N S
Sbjct: 307 ECNCPFNAFVSVSDPKCLVPYQKPGCKSGFNMVKFKNLELYGIYPANDS 355
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 235 GKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGD----TSNFGGRLDWSNKNANAALDISKA 402
G Y +NDD K A GT+ G G+ TS++G S+ A ++
Sbjct: 579 GSTDYDTSQYNDDMIKFRKMALGTQEYGTTGEYSNPTSDYGLYPSGSSSEGQATREMEMG 638
Query: 403 NRRKT 417
+KT
Sbjct: 639 KIKKT 643
>At5g18260.1 68418.m02146 expressed protein
Length = 320
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 305 VPYACPSNLPRSSLKNCRVYPALPNNPSSFC 213
VP+ P+N SSL +C YP + NP S C
Sbjct: 91 VPWETPTNNQSSSLTHCS-YPRVFCNPVSVC 120
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 386 LISAKQIGGRPNLSASGAGVWNFDKNTRLSA 478
L SA Q+ + NL A AG+W+ D N++L A
Sbjct: 67 LSSANQL--KDNLPAMVAGIWSEDSNSQLEA 95
>At2g48140.1 68415.m06026 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 200
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 464 CSCQSSTHRLHLPTGLVFRLFALLISRA 381
C+C T + LPTG + R AL + RA
Sbjct: 70 CACLILTANVPLPTGFINRTLALALPRA 97
>At5g38460.1 68418.m04649 ALG6, ALG8 glycosyltransferase family
protein similar to SP|Q9Y672 Dolichyl pyrophosphate
Man9GlcNAc2 alpha-1,3-glucosyltransferase (EC 2.4.1.-)
(Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl
glucosyltransferase) {Homo sapiens}; contains Pfam
profile PF03155: ALG6, ALG8 glycosyltransferase family
Length = 533
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 446 THRLHLPTGLVFRLFALLISRAAFAFLLDQSNLPPKF 336
TH+ + L LFALLI A + + +PPKF
Sbjct: 34 THKGTTTSFLCISLFALLIRSAVTMYPYSGAGIPPKF 70
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 27.1 bits (57), Expect = 8.8
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Frame = +1
Query: 61 ILACVYAQVSMPPSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGK 240
ILA + + +P ++ +Y QAR IG G + Q D+GL
Sbjct: 12 ILAALVGALVVPLKAQDSQQDYVNAHNQAR--------SQIGVGPM-----QWDEGLAAY 58
Query: 241 A-GYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAALDISKAN 405
A Y Q D R YG + GD S W N+ AN D + N
Sbjct: 59 ARNYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCN 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,279,617
Number of Sequences: 28952
Number of extensions: 334434
Number of successful extensions: 1059
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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