Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C06
(566 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1) id... 33 0.13
At2g36450.1 68415.m04474 AP2 domain-containing protein low simil... 30 1.2
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 29 1.6
At1g19350.5 68414.m02408 brassinosteroid signalling positive reg... 29 2.2
At1g19350.4 68414.m02407 brassinosteroid signalling positive reg... 29 2.2
At1g19350.3 68414.m02405 brassinosteroid signalling positive reg... 29 2.2
At1g19350.1 68414.m02406 brassinosteroid signalling positive reg... 29 2.2
At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 29 2.9
At5g18260.1 68418.m02146 expressed protein 28 5.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 5.0
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 27 6.6
At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) famil... 27 8.7
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 27 8.7
>At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1)
identical to gi:6503088 (GB:AAF14583) from [Arabidopsis
thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494
(2000)); contains Pfam profile PF01419 jacalin-like
lectin domain
Length = 174
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 93 EYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGKAGYTRQF 233
EYYK+ H R + ++ N FGT G ++D K G + QF
Sbjct: 85 EYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQF 131
>At2g36450.1 68415.m04474 AP2 domain-containing protein low
similarity to DREB1B GI:3738226 from [Arabidopsis
thaliana]; contains Pfam profile PF00847: AP2 domain
Length = 184
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 463 LSDPPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPA 293
+ +P R++L F TP A + + + L S+A F S+LP +SPA
Sbjct: 31 IREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPA 87
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 331 QSNLPPKFEVSPAGPKTLVPY---ACPSNLPRSSLKNCRVYPALPNNPS 194
+ N P VS + PK LVPY C S KN +Y P N S
Sbjct: 307 ECNCPFNAFVSVSDPKCLVPYQKPGCKSGFNMVKFKNLELYGIYPANDS 355
>At1g19350.5 68414.m02408 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 239
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 238 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g19350.4 68414.m02407 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 239
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 238 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g19350.3 68414.m02405 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 357
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 239
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 132 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 184
Query: 238 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
L R+ + P P P+ N PLP + S
Sbjct: 185 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 216
>At1g19350.1 68414.m02406 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 239
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 238 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g04120.1 68414.m00401 ABC transporter family protein Strong
similarity to MRP-like ABC transporter gb|U92650 from A.
thaliana and canalicular multi-drug resistance protein
gb|L49379 from Rattus norvegicus
Length = 1514
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 520 FLKRMWWFLNFIIC 561
FL R+WWFL F IC
Sbjct: 143 FLVRIWWFLAFSIC 156
>At5g18260.1 68418.m02146 expressed protein
Length = 320
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 277 VPYACPSNLPRSSLKNCRVYPALPNNPSSFC 185
VP+ P+N SSL +C YP + NP S C
Sbjct: 91 VPWETPTNNQSSSLTHCS-YPRVFCNPVSVC 120
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 207 GKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSN 311
G Y +NDD K A GT+ G G+ SN
Sbjct: 579 GSTDYDTSQYNDDMIKFRKMALGTQEYGTTGEYSN 613
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLP 248
H+P PL+ PP+ +I F +S PP +SP G + P + PS+ P
Sbjct: 75 HSPPPLSQSLSPPPLITVIHPPPPRFYYFESTPPPP-PLSPDGKGS--PPSVPSSPP 128
>At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
Length = 458
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 304 PQTSEAGWIGLIRMQTLPLISASK*AEDQTCRQVEPVCGTLTRTL 438
P+T + + I T +I+ K +E C V PVC +++ L
Sbjct: 143 PETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVSKPL 187
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 312 FGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSA 449
F + + + D+S + NL A AG+W+ D N++L A
Sbjct: 50 FTSSMAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQLEA 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,041,829
Number of Sequences: 28952
Number of extensions: 333613
Number of successful extensions: 1027
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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