Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B24
(515 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 137 5e-33
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 136 1e-32
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 136 1e-32
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 136 1e-32
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 70 8e-13
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 69 1e-12
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 66 1e-11
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 66 1e-11
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 61 4e-10
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 1e-08
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 53 1e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 1e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 52 2e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 52 3e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 52 3e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 3e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 3e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 5e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 51 5e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 51 5e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 50 7e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 50 9e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 50 9e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 2e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 48 3e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 9e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 47 9e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 47 9e-06
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 46 2e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 46 2e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 45 3e-05
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 44 5e-05
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 44 5e-05
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 5e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 44 6e-05
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 43 1e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 43 1e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 42 2e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 2e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 42 2e-04
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 42 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 3e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 42 3e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 3e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 41 4e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 41 6e-04
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 40 8e-04
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 40 8e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 40 8e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.001
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 40 0.001
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 39 0.002
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 39 0.002
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 39 0.002
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 39 0.002
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 39 0.002
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 39 0.002
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 39 0.002
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 39 0.002
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 39 0.002
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 39 0.002
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 39 0.002
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 39 0.002
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 39 0.002
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.003
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.003
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 38 0.004
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 38 0.005
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.005
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.007
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 37 0.009
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 37 0.009
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 37 0.009
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 37 0.009
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 37 0.009
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.009
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 36 0.012
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 36 0.016
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.016
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 36 0.016
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 36 0.016
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 28 0.020
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 27 0.020
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.021
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 36 0.021
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 35 0.028
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 35 0.028
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 35 0.028
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 35 0.028
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.037
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 35 0.037
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 34 0.049
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.049
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 34 0.049
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 34 0.049
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 34 0.065
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 34 0.065
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 33 0.11
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 33 0.11
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.11
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 33 0.11
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 33 0.11
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 32 0.20
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 32 0.20
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 32 0.20
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.26
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.26
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.26
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.26
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 32 0.26
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 32 0.26
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 31 0.35
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 0.35
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 0.35
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 31 0.35
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 31 0.35
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 31 0.35
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 31 0.35
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 31 0.46
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 0.46
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 31 0.61
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 31 0.61
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 31 0.61
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.61
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 0.61
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 30 0.80
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 30 0.80
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 30 0.80
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 30 1.1
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 30 1.1
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 30 1.1
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 1.4
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 29 1.4
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 1.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 1.4
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 1.4
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 29 1.9
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 29 1.9
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 29 1.9
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 29 2.5
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 29 2.5
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 29 2.5
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 29 2.5
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 29 2.5
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 29 2.5
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 29 2.5
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 29 2.5
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 29 2.5
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 28 3.2
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 28 3.2
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 28 4.3
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 28 4.3
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 4.3
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 4.3
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 4.3
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 28 4.3
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 28 4.3
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 28 4.3
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 28 4.3
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 28 4.3
At5g23070.1 68418.m02697 thymidine kinase, putative similar to t... 27 5.7
At3g33530.1 68416.m04290 transducin family protein / WD-40 repea... 27 5.7
At3g23840.1 68416.m02997 transferase family protein low similari... 27 5.7
At2g25800.1 68415.m03096 expressed protein 27 5.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 27 5.7
At1g08640.1 68414.m00959 expressed protein 27 5.7
At2g11090.1 68415.m01187 expressed protein 25 7.2
At4g32300.1 68417.m04596 lectin protein kinase family protein co... 27 7.5
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 27 7.5
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 27 7.5
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 27 7.5
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 27 7.5
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 27 9.9
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 27 9.9
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 27 9.9
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 27 9.9
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 27 9.9
At2g27090.1 68415.m03255 expressed protein contains Pfam domains... 27 9.9
At2g23560.1 68415.m02812 hydrolase, alpha/beta fold family prote... 27 9.9
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 27 9.9
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 27 9.9
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 137 bits (331), Expect = 5e-33
Identities = 61/137 (44%), Positives = 87/137 (63%)
Frame = +3
Query: 72 MKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV 251
M+P++++GHER +T ++YNR GDLLFS AKD P VW++ NGERLGT+ GH G VWC D+
Sbjct: 28 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 87
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPC 431
S LITG D + +LWD+++GK + T K + R+ +FS + A TTD +G
Sbjct: 88 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSS 147
Query: 432 EVFIVDTRTIDESISDQ 482
+ + + I E DQ
Sbjct: 148 AIHV---KRIAEDPEDQ 161
Score = 33.5 bits (73), Expect = 0.086
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFN---GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+ S +DA +W + G+ L + GH + L H +TG D + +LWD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 315 ETGKNIATIKTNSSVRTCN 371
T + IKT ++V N
Sbjct: 250 RT---LTLIKTYTTVVPVN 265
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 136 bits (328), Expect = 1e-32
Identities = 57/113 (50%), Positives = 79/113 (69%)
Frame = +3
Query: 72 MKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV 251
M+P++++GHER +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G VWC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTD 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 270 LITGGGDSSCRLWDLETGK 326
+++GG D R+WD ETGK
Sbjct: 163 IVSGGEDKVIRIWDAETGK 181
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFN---GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+ S +D +W + G+ L + GH + L H +TG D + +LWD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 315 ETGKNIATIKTNSSVRTCN 371
T + +KT ++V N
Sbjct: 223 RT---LTLLKTYTTVVPVN 238
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 136 bits (328), Expect = 1e-32
Identities = 57/113 (50%), Positives = 79/113 (69%)
Frame = +3
Query: 72 MKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV 251
M+P++++GHER +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G VWC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTD 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 270 LITGGGDSSCRLWDLETGK 326
+++GG D R+WD ETGK
Sbjct: 163 IVSGGEDKVIRIWDAETGK 181
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFN---GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+ S +D +W + G+ L + GH + L H +TG D + +LWD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 315 ETGKNIATIKTNSSVRTCN 371
T + +KT ++V N
Sbjct: 223 RT---LTLLKTYTTVVPVN 238
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 136 bits (328), Expect = 1e-32
Identities = 57/113 (50%), Positives = 79/113 (69%)
Frame = +3
Query: 72 MKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV 251
M+P++++GHER +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G VWC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTD 410
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 270 LITGGGDSSCRLWDLETGK 326
+++GG D R+WD ETGK
Sbjct: 163 IVSGGEDKVIRIWDAETGK 181
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFN---GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+ S +D +W + G+ L + GH + L H +TG D + +LWD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 315 ETGKNIATIKTNSSVRTCN 371
T + +KT ++V N
Sbjct: 223 RT---LTLLKTYTTVVPVN 238
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 70.1 bits (164), Expect = 8e-13
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNR---EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD 248
PL+ GH R + + Y+ +G L SA+KD+ P + G+ +GTF GH G VW
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFS 377
+D +I + D + ++W+ TG + + + VR C FS
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFS 106
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 69.3 bits (162), Expect = 1e-12
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNR---EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD 248
PL+ GH R + + Y+ +G L SA+KD++P + G+ +GTF GH G VW
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFS 377
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 300 RLWDLETGKNIATIKTNSSVRTCNFS 377
RLWD+ +GK + T++T S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 66.1 bits (154), Expect = 1e-11
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNR---EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD 248
P + GH R + + Y+ +G L SA+KD+ P + G+ +GTF GH G VW
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFS 377
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 129 REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
+ G+ + +D V+ GE +G GH G V C+ + +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 300 RLWDLETGKNIATIKTNSSVRTCNFS 377
RLWD+ +GK + T++T S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 66.1 bits (154), Expect = 1e-11
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNR---EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD 248
P + GH R + + Y+ +G L SA+KD+ P + G+ +GTF GH G VW
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFS 377
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 129 REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
+ G+ + +D V+ GE +G GH G V C+ + +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 300 RLWDLETGKNIATIKTNSSVRTCNFS 377
RLWD+ +GK + T++T S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L+ +GH R++ I + ++G L S D+ VW G + F GH V+ ++
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNSSV 359
HL +GG D+ CR+WDL K++ I ++++
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH + ++ ++ G L + + D +W G L GH V+ +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGAL 395
Query: 270 LITGGGDSSCRLWDLETGKNIATIKTN-SSVRTCNFSFSAYQAA 398
+ G DS R+WDL TG++I + + V + NFS + Y A
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
++ H ++Q+KY +EG L +A+ D K N+W + + + GH V LD+
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Query: 261 SIHLITGGGDSSCRLW 308
S + T D + +LW
Sbjct: 520 SSCIATVSHDRTIKLW 535
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/87 (27%), Positives = 46/87 (52%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GHE I+ + ++ + + SA+ D +W G + T GH +C++ + QS +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNS 353
++G D + R+WD+ TGK + + +S
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWW--SLN---GERLGTFNGHGGVVWCLDV 251
L H RA++ +K++ +G LL SA+ D + ++N E + F GH + +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC-NFS 377
+ +++ D + +LWD+ETG I T+ +++ C NF+
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + +N + +++ S + D +W G+ L H V +D +
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 267 HLITGGGDSSCRLWDLETGKNIATI 341
+++ D CR+WD TG + T+
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGT-FNGHGGVVWCLDVDWQ 260
+L H +T + +NR+G L+ S++ D +W S G + T + V +
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
++ G D++ RLW++ + K + T + + + C
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/76 (17%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 108 ITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH---LIT 278
++ ++++ G + D +W + + L T+ GH +C+ + + +++
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 279 GGGDSSCRLWDLETGK 326
G D+ +W+L + K
Sbjct: 261 GSEDNCVHMWELNSKK 276
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 93 GHERAITQIKY-NREGDLLFSAAKDAKPNVWWSLN-GERLGTFNGHGGVVWCLDVDWQSI 266
GH + ++ I++ ++G LL SA D K +W N G+ + T+ GH V +
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKT 347
+T G D + + WD ETG+ I+T T
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFST 366
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH R + +++ +G + S +D VW G+ L F H G + LD
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 270 LITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNFS 377
L TG D + + WDLET + I + T ++ VR F+
Sbjct: 293 LATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 329
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + ++ G+ S + D +W + T+ GH V L
Sbjct: 190 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 249
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTN 350
+++GG D+ ++WDL GK + K++
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGD-LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
H A+ +K R+ +L + +D K N+W + + GH + + D +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSS 356
G + +LWDLE K + T+ + S
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRS 195
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L L GH I + ++ L+ + A +W + + T GH C+ V++
Sbjct: 146 LSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSN--CVSVNFH 203
Query: 261 SI--HLITGGGDSSCRLWDLETGKNIATIK 344
+G D++ ++WD+ I T K
Sbjct: 204 PFGEFFASGSLDTNLKIWDIRKKGCIHTYK 233
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 2e-07
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGE--RLGTFNGHGGVVWCLDVD 254
++L GH A+ +K+N G L+ S + D + +W ++G+ GH + LD+
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVLKGHKNAI--LDLH 103
Query: 255 WQS--IHLITGGGDSSCRLWDLETGKNIATIKTNSS-VRTC 368
W S +++ D + R WD+ETGK I + +SS V +C
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 108 ITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGG 287
IT + ++ D +F+ D VW GE T GH + + + +L+T G
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 288 DSSCRLWDL 314
D+ +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVW----WSLNGERLGTFNG--HGGVVWC 242
+ L+GH+ IT + + +G L + D K VW ++ + F G H
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 243 LDVDW--QSIHLITGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNF 374
L W + G D +WD + + I + ++ SV C F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 270 LITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
+ TGG D+ ++WDL G+ T++ + T
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH++ + + ++ +G + SA+ D +W + G+ + F GH G V+ + S
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 267 HLITGGGDSSCRLWDLETGK 326
L++G DS+ ++W++ T K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKK 435
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +3
Query: 12 VSRSLIIVFVHK-IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWS 188
V + L IV+ + ++ I +N + GH A+ + ++ +G L S + D +W
Sbjct: 79 VEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Query: 189 LNGERLGTFNGHGGVVWCLDVDW--QSIHLITGGGDSSCRLWDLETGK 326
L T GH W L V W HL++G W+ + G+
Sbjct: 139 YTETPLFTCKGHKN--WVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+ +GH + Q+ ++ + LL S +KD+ +W + GH V+ +D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 264 IHLITGGGDSSCRLW 308
+++GG D +LW
Sbjct: 457 EKVVSGGKDRVLKLW 471
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/92 (23%), Positives = 45/92 (48%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
+ L GH A+T +K+ +G ++++ ++D +W + G+ + GHG + L + +
Sbjct: 235 ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNSS 356
+ L TG D + R + K A + N +
Sbjct: 294 YV-LRTGAFDHTGRQYPPNEEKQKALERYNKT 324
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 210 TFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK 344
T GH V C+ L +G GD++ RLWDL T + T K
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK 148
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLI 275
H ++ +K+ R LFS KD W + E L T GH +WCL + + L+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 276 TGGGDSSCRLWD 311
TG D S R WD
Sbjct: 683 TGSHDRSMRRWD 694
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH +T + + G L S++KD VW + +GH VW +D D +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSS 356
+++TG D R + ++ + ++ ++S+
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLI 275
H+ A+T ++YN+ G +L S +KD +W + L GH V L L+
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 276 TGGGDSSCRLWDLET 320
+ D R+WDLET
Sbjct: 165 SSSKDKFLRVWDLET 179
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/120 (21%), Positives = 58/120 (48%)
Frame = +3
Query: 9 HVSRSLIIVFVHKIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWS 188
H++ +L+ V K++ +D L L L GH+ + I + +G+L+ + ++D +W
Sbjct: 554 HIAVALLDSTV-KVFYMDSLKFY-LSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
Query: 189 LNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
G+ + HG V + + +L + G D + WD + +++ T++ + + C
Sbjct: 612 DFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWC 671
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
G A+T I + L+ D +W + G FN H G V L + L
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 273 ITGGGDSSCRLWDL 314
+G D+ LWD+
Sbjct: 122 ASGSKDNDIILWDV 135
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH R I+ I++ +G + S D VW G+ L F H G + LD
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 270 LITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNF 374
L TG D + + WDLET + I + + ++ VR+ F
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKF 234
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + ++++ G+ L S + DA +W + T+ GH + + +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNF 374
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Score = 34.7 bits (76), Expect = 0.037
Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
+ L GH A+ + ++ L+ + A +W + + F GH ++
Sbjct: 52 MSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPF 111
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNFS 377
L +G D++ ++WD+ I T K +S + T F+
Sbjct: 112 GEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +3
Query: 141 LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLET 320
L + D K N+W L + GH V + D + ++ G +LWD+E
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 321 GKNI 332
K +
Sbjct: 90 AKMV 93
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 195 GERLGTFNGHGGVVWCLDVDWQSIHL-ITGGGDSSCRLW 308
G +L F H V CL + ++ L ITGG D LW
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLW 43
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 51.6 bits (118), Expect = 3e-07
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH R I+ I+++ +G + S D VW G+ L F H G + LD
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 270 LITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNF 374
L TG D + + WDLET + I T + ++ VR F
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
Score = 43.6 bits (98), Expect = 8e-05
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + ++++ G+ L S + D VW + + T+ GH + ++ +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNF 374
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
+ L GH + + +N E L+ + A +W + + F GH ++
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNFS 377
L +G D++ R+WD I T K ++ + T FS
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 100
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +3
Query: 39 VHKIYSID*LNMKPLMLQGHERA--ITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGT 212
VH +I+ L +K + +E++ +T + +N EG LL + + D + +W +LNGE + T
Sbjct: 302 VHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELIST 360
Query: 213 FNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLE 317
+ H G ++ L + + +L+TG D + +WD++
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETG 323
L SA+ D+ +W + G+ L +FNGH V+ L ++ +G D S +W ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 324 KNIATIKTNSSV 359
K + T N +
Sbjct: 574 KIVKTYTGNGGI 585
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ-S 263
L H+ I +K+N++GD L + + D VW E F H G LDVDW+ +
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT--LDVDWRNN 418
Query: 264 IHLITGGGDS 293
+ T DS
Sbjct: 419 VSFATSSTDS 428
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGV 233
GH + + ++ G+ + S + D ++W G+ + T+ G+GG+
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGI 585
Score = 30.7 bits (66), Expect = 0.61
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL--------- 245
GH+ + +K++ G LL S + D+ +W + H ++ +
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 246 DVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTN-SSVRTCNFSFSA-YQAAYTTDKAM 419
+ + + L + DS+ +LWD E GK + + + V + FS + Y A+ + DK++
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 210 TFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLE 317
TF GH G V C+ D L + DS+ ++W+++
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L L GH + + + +FSA D + W + + +++GH V+CL +
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPT 271
Query: 261 SIHLITGGGDSSCRLWDLETGKNI 332
L+TGG DS CR+WD+ T I
Sbjct: 272 LDVLLTGGRDSVCRVWDIRTKMQI 295
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + + + D+L + +D+ VW ++ +GH V + +
Sbjct: 258 GHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 273 ITGGGDSSCRLWDLETGKNIATI 341
+TG D++ + WDL GK ++T+
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTL 340
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
++QGH + + ++ + + + D +W G T GH V L V +
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 264 IHLITGGGDSSCRLWDLETGKNI 332
++ + G D + WDLE K I
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVI 253
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETG 323
P W + GH G V + D + TG D + ++WD+ TG
Sbjct: 158 PRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 50.8 bits (116), Expect = 5e-07
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNG-ERLGTFNGHGGVVWCLDVDWQSI 266
+GH I+ + ++ + SA+ D +W + + E L GH V+C++ + S
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNS 353
+++G D + R+W+++TGK + IK +S
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH AI+ +K++ +G+LL SA+ D +W + N + + GH + L S
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 267 HLITGGGDSSCRLWD 311
+ + D + R+WD
Sbjct: 99 YTCSASDDCTLRIWD 113
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/100 (20%), Positives = 43/100 (43%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+L+GH + + +N +L+ S + D +W G+ + H + + +
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFS 383
+++ D SC++WD + G + T+ + S FS
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFS 222
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDW---QSIHLI 275
A++ K++ G + A D+ + G+ L + GH V+C+ + +++
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274
Query: 276 TGGGDSSCRLWDLETGKNI 332
+G D+ LWDL+ +NI
Sbjct: 275 SGSEDNCVYLWDLQ-ARNI 292
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 50.4 bits (115), Expect = 7e-07
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L L GH + + + +FSA D + W + + +++GH V+CL +
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPT 265
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKTNSSV 359
++TGG DS CR+WD+ T I + +S V
Sbjct: 266 LDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+LQGH + + ++ + + + D +W G T GH G V L V +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 264 IHLITGGGDSSCRLWDLETGKNI 332
++ + G D + WDLE K I
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVI 247
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + + + D++ + +D+ VW ++ H V+ + +
Sbjct: 252 GHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQV 310
Query: 273 ITGGGDSSCRLWDLETGKNIATI 341
ITG DS+ + WDL GK++ATI
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATI 333
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 132 EGDLLFSAAKDAKPNVW----WSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSC 299
E +L +A + P+ W W + GH G V + D + TG D +
Sbjct: 135 ERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTI 194
Query: 300 RLWDLETG 323
++WD+ TG
Sbjct: 195 KIWDVATG 202
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH R + +++ +G + S +D VW G+ L F H G + LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 270 LITGGGDSSCRLWDLET 320
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGD-LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
H A+ +K R+ +L + +D K N+W + + GH + + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSS 356
G + +LWDLE K + T+ + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + ++ G+ S + D +W + T+ GH V L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTN 350
+++GG D+ ++WDL GK + K++
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 261 SI--HLITGGGDSSCRLWDLETGKNIATIK 344
+G D++ ++WD+ I T K
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYK 140
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 RLGTFNGHGGVVWCLDVDWQSIH-LITGGGDSSCRLWDLETGKNIATIKTNSS 356
+L F H V CL + +S L+TGG D LW + I ++ +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH R + +++ +G + S +D VW G+ L F H G + LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 270 LITGGGDSSCRLWDLET 320
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGD-LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
H A+ +K R+ +L + +D K N+W + + GH + + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSS 356
G + +LWDLE K + T+ + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + ++ G+ S + D +W + T+ GH V L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTN 350
+++GG D+ ++WDL GK + K++
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 261 SI--HLITGGGDSSCRLWDLETGKNIATIK 344
+G D++ ++WD+ I T K
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYK 140
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 RLGTFNGHGGVVWCLDVDWQSIH-LITGGGDSSCRLWDLETGKNIATIKTNSS 356
+L F H V CL + +S L+TGG D LW + I ++ +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+L+GHE A+ ++N +G+ + KD +W G + T+ HG V + V +
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 264 IHLITGGGDSSCRLWDLETGKNI 332
+ GGD WD+ TG+ I
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVI 95
Score = 33.9 bits (74), Expect = 0.065
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+ H R + + + S D + W G + F GH G V + + S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSV 116
Query: 270 LITGGGDSSCRLWD 311
+++ G D S R+WD
Sbjct: 117 VVSAGFDRSLRVWD 130
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 219 GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTN 350
GH G V + + +T G D + RLW+ G I T K++
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSH 59
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VDWQSIHLITGGGD 290
I + +G+ + + D+ + GE L + GH + D + H+I G D
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSED 249
Query: 291 SSCRLWDLETGKNIATIKTNSSVRT 365
WDL K ++ + + V T
Sbjct: 250 GLVFFWDLVDAKVLSKFRAHDLVVT 274
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.4 bits (110), Expect = 3e-06
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 90 QGHERAITQIKY--NREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+GH ++ +++ N + SA+ D VW N + T GH G V + V
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPCEVFI 443
+GG D LWDL GK + +++ NS + FS + Y T+ H +++
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE----HGIKIWD 262
Query: 444 VDTRTIDESI 473
+++++I E +
Sbjct: 263 LESKSIVEDL 272
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/75 (20%), Positives = 30/75 (40%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + + + +G S + D + +W G F GH V + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 267 HLITGGGDSSCRLWD 311
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFN----GHGGVVWCLDVDWQ 260
GH + + + ++ + + SA++D +W +L GE T + GH V C+
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 261 SIH--LITGGGDSSCRLWDLETGKNIATI 341
++ +++ D + ++W+L K +T+
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTL 190
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH+R I ++++ + +A+ D +W +G L TF GH V
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 267 HLITGGGDSSCRLWDLETGKNIAT 338
++ G D +LW++ T + IAT
Sbjct: 597 QFVSCGADGLLKLWNVNTSECIAT 620
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+GH ++ + + +G S D +W E + T++ H VW L V ++
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEM 639
Query: 270 LITGGGDSSCRLWDLETGKN 329
+ TGGGD+ LW T +
Sbjct: 640 IATGGGDAVINLWHDSTASD 659
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL--DVDWQS 263
+GHE + + + G LL +A D K VW G F GH GVV + D
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 264 IHLITGGGDSSCRLWDL 314
LI+G D++ R+WDL
Sbjct: 159 NILISGSDDATVRVWDL 175
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/98 (18%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 66 LNMKPL-MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWC 242
+N+K ++ H++ I + R L+ + ++D ++W + + T GH ++
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 243 LDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS 356
++ ++T GD + ++W + G + T + ++S
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
++G +T + + + LLFSA + VW + + ++ GH G V +
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 267 HLITGGGDSSCRLWDLETG 323
L T G D +WD++ G
Sbjct: 116 LLATAGADRKVLVWDVDGG 134
Score = 33.5 bits (73), Expect = 0.086
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +3
Query: 90 QGHERAITQIKYNREGD--LLFSAAKDAKPNVWWSLNGER-----LGTFNGHGGVVWCLD 248
+GH+ ++ I ++ + + +L S + DA VW LN + L H V +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVW-DLNAKNTEKKCLAIMEKHFSAVTSIA 199
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKNIATIKT 347
+ + L + G D LWDL AT+ T
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDLHDYSCKATVAT 232
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 84 MLQGHERAITQIK--YNREGDLLF-SAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVD 254
+L GH+ + + + G++L + +KD +W + + +G GH G + +
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 255 WQSI-HLITGGGDSSCRLWDLE 317
+S ++G GD + ++W L+
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLD 477
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+++ H A+T I + +G LFSA +D N+W
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDW 257
P + +GH+ ++ + N G +L S + VW G + GH V L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIAT--IKTNSS-VRTCNFSFS 383
++G DS RLWDL + + T + T+S CN SFS
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 75 KPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGER-LGTFNGHGGVVWCLDV 251
K + L+GH + + + G S + D+ +W L +R L T+ H VW L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW-DLGQQRCLHTYAVHTDSVWALAC 305
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPC 431
+ H+ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 432 EV 437
EV
Sbjct: 366 EV 367
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDW 257
P + +GH+ ++ + N G +L S + VW G + GH V L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIAT--IKTNSS-VRTCNFSFS 383
++G DS RLWDL + + T + T+S CN SFS
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 75 KPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGER-LGTFNGHGGVVWCLDV 251
K + L+GH + + + G S + D+ +W L +R L T+ H VW L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW-DLGQQRCLHTYAVHTDSVWALAC 305
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPC 431
+ H+ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 432 EV 437
EV
Sbjct: 366 EV 367
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L QGH + + Y+ + LL + A D K VW ++G TF H V L
Sbjct: 343 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 402
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKT 347
+ L++ D + R WD + KN T T
Sbjct: 403 NHSLLSASLDGTVRAWDFKRYKNYKTYTT 431
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGD-LLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDW 257
+L + +T +N G+ L F AK + VW W L GH V C+
Sbjct: 301 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 359
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
S L TG D+ ++W++ +G T +++ T
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 395
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L QGH + + Y+ + LL + A D K VW ++G TF H V L
Sbjct: 383 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 442
Query: 261 SIHLITGGGDSSCRLWDLETGKNIATIKT 347
+ L++ D + R WD + KN T T
Sbjct: 443 NHSLLSASLDGTVRAWDFKRYKNYKTYTT 471
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGD-LLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDW 257
+L + +T +N G+ L F AK + VW W L GH V C+
Sbjct: 341 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 399
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
S L TG D+ ++W++ +G T +++ T
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 435
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG-TFNGHGGVVWCLDVDWQS 263
LQ H I + + L +A+ D +W +L+G +L GH VW D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIW-NLDGFKLEKVLTGHERWVWDCDFSMDG 271
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
+L+T D++ RLW + GK + + C
Sbjct: 272 EYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 33.9 bits (74), Expect = 0.065
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +3
Query: 45 KIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGH 224
KI+++D ++ + L GHER + ++ +G+ L +A+ D +W G+ + H
Sbjct: 242 KIWNLDGFKLEKV-LTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
Query: 225 GGVVWC 242
C
Sbjct: 301 RKATVC 306
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG-TFNGHGGVVWCLDVDW 257
L L GHE +I +I ++ +G + S + D +W + E +G GH VW D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIK 344
++T G D +CR+W ++ G + IK
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIK 314
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG-TFNGHGGVVWCLDVDW 257
L L GHE +I +I ++ +G + S + D +W + E +G GH VW D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIK 344
++T G D +CR+W ++ G + IK
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIK 314
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.4 bits (100), Expect = 5e-05
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 93 GHERAITQIKY--NREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAM 419
+GG D LWDL GK + +++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 33.5 bits (73), Expect = 0.086
Identities = 20/88 (22%), Positives = 40/88 (45%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + + + +G L S KD +W G++L + G ++ L +
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTN 350
+ + ++S R+WDLE+ + +K +
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLKVD 274
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
+ GH + + + +G S + D + +W GE F GH V + +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 267 HLITGGGDSSCRLWD 311
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGE---RLGTFNGHGGVVWCLDVDWQS 263
GH + + + ++ + + SA++D +W +L GE + +GH V C+ +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNT 161
Query: 264 I--HLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ +++ D + ++W+L+ K T+ +S
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNTLAGHS 193
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +3
Query: 138 DLLFSAAKDAKPNVWWSLNGERLG------TFNGHGGVVWCLDVDWQSIHLITGGGDSSC 299
D++ ++++D K + W L E GH V + + ++G D
Sbjct: 29 DVIVTSSRD-KSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGEL 87
Query: 300 RLWDLETGKN 329
RLWDL TG++
Sbjct: 88 RLWDLATGES 97
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSL--NGE-----RLG-TFNGHGGVVW 239
+L GH + + ++++ D+LFS + D VWWS +GE LG + NGH VW
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 240 CLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ + ++T D + ++W + K
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 75 KPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVW--WSLNGERLGTFNGHGGVVWCLD 248
K ++ + H R + ++ G LL +A+ D +W + E + T GH V +
Sbjct: 66 KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 249 VDWQSIHLITGGGDSSCRLWDLETG 323
+ L T D S +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +3
Query: 57 ID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVV 236
+D KPL + + +I +N GD F V + + L T H
Sbjct: 135 LDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGC 194
Query: 237 WCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATI-KTNSSVRTCNFSFSA-YQAAYTTD 410
+C+ +D + + G DS LWD+ + T K VRT +F++S Y A+ + D
Sbjct: 195 YCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVW-WSLNGERLGT---FNGHGGVVWCLDVDW 257
QGH++ + + +N G L S + D +W +G GH V L D
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 258 QSIHLI-TGGGDSSCRLWDLETGK 326
+ L+ T GD S RLWD +GK
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGK 100
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = +3
Query: 3 LPHVSRSLIIVFVHKIYSID*L--NMKPLMLQGHERAITQIKYNREGDLL--FSAAK--D 164
+P V+ ++++ HK + D + ++ L T+ + +G LL F A+ D
Sbjct: 92 VPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGFD 151
Query: 165 AKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ VW + F GH V +D HL +GG D+ CR+WDL K
Sbjct: 152 SLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 39 VHKIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFN 218
V K++ + + K ++L+GH+ +T + ++ D + A + W +G L TF
Sbjct: 86 VPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFK 145
Query: 219 GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTN-SSVRTCNFSFSAYQA 395
G DS R+WDL T +NI + + V + +FS + Y
Sbjct: 146 ASSGF------------------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHL 187
Query: 396 A 398
A
Sbjct: 188 A 188
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 66 LNMKPLM--LQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVV 236
L M+ L+ + H ++Q+KY +E L +A+ D N+W + + + GH V
Sbjct: 201 LRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 237 WCLDV 251
LD+
Sbjct: 261 ASLDI 265
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 93 GHERAITQIKY--NREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
GH+ ++ +++ N + SA+ D VW N + + GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAM 419
+GG D LWDL GK + +++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 33.5 bits (73), Expect = 0.086
Identities = 16/75 (21%), Positives = 31/75 (41%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + + + +G S + D + +W GE F GH V + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 267 HLITGGGDSSCRLWD 311
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/88 (22%), Positives = 40/88 (45%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH + + + +G L S KD +W G++L + G ++ L +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTN 350
+ + ++S R+WDLE+ + +K +
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLKVD 274
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREG-DLLFSAAKDAKPNVWWSLN------GERLGTFNGHGGVVWC 242
+++ H +T I + D++ +A++D K + W L G GH V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRD-KSIILWKLTKDDKSYGVAQRRLTGHSHFVED 68
Query: 243 LDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ + ++G D RLWDL TG+
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGE 96
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVW--CLDVDWQSI 266
GH + + + ++ + + SA++D +W +L + G G W C+ ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 267 --HLITGGGDSSCRLWDLETGK 326
+++ D + ++W+L+ K
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCK 184
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/97 (23%), Positives = 43/97 (44%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLI 275
H + +T + ++R+G L S + D + +G+ L F GH V +I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 276 TGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSA 386
T D + ++WD +T + T K +R + S ++
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNS 400
Score = 32.7 bits (71), Expect = 0.15
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = +3
Query: 120 KYNREGDLLFSAAKDAKPNVWWSLNGERLG--------TFNGHGGVVWCLDVDWQSIHLI 275
+++ +G L S++ D VW ++G+ +F H V C+D S L
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 279
Query: 276 TGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNFSFSAYQAAYTT 407
+G D ++W + TG I +S V + +FS Q T+
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTS 324
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG----GVVWCLDV 251
M GH +T + +G L+ + + DA VW E + GH G+ CLD+
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLT-CLDI 250
Query: 252 DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNFSFSA 386
+ S I+G D S + ++ TGK ++++ +++ SV FS S+
Sbjct: 251 NSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSS 296
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+L G I ++++ G ++ + ++D +W + L F+GH V C D
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG 209
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIK 344
+ TG D+S +W+ +T ++I +K
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVK 236
Score = 35.9 bits (79), Expect = 0.016
Identities = 18/87 (20%), Positives = 40/87 (45%)
Frame = +3
Query: 78 PLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDW 257
P + HE +T + + L + + ++W SL G + T++GH V + V
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST 380
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIAT 338
+ +++ D++ R+++ +N T
Sbjct: 381 NTDFIVSVSVDNTARVFESSEFQNKVT 407
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL- 272
H +T + N L S +KD ++ + G+ + + N H V C+ S +
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 273 --ITGGGDSSCRLWDLE 317
TGG D +WDL+
Sbjct: 301 LAATGGMDKKLIIWDLQ 317
Score = 34.3 bits (75), Expect = 0.049
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 192 NGERLGTFNGHGGVVWCLDVDWQSIHLI-TGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
N + + TF GH G ++ L L+ TGGGD LW + G A + + +C
Sbjct: 59 NDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSC 118
Query: 369 NFSFSAYQAAYTTDKAMGHPCEVFIVDTRTIDESISDQAPILKW 500
+FS Y + ++F + T+ + ++W
Sbjct: 119 -LAFS-YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEW 160
Score = 30.3 bits (65), Expect = 0.80
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 132 EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWD 311
+ L+ + D K +W NG+ GH V CL + L +GG D +++D
Sbjct: 82 DATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Query: 312 LETG 323
+G
Sbjct: 142 ASSG 145
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVW-WSLNGERLG--TFNGHGGVVWCLDVDW 257
L GH + +T IK+ + DL+ +A+ D +W S +G T H V + V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAY 389
+ + ++ DS+ +DL +G +A + T++S N++ +A+
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQV-TDASENDVNYTAAAF 362
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +3
Query: 111 TQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGD 290
T ++ +G +L + + +W + + F GH G + + L T D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 291 SSCRLWDLETGKNIAT 338
RLWDL KN T
Sbjct: 418 -GVRLWDLRKLKNFRT 432
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVV---W---CLDVD 254
GH A+T + +R G+ + ++ +D NV+ + E GT G + W C+ D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPD 456
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNFS 377
++ G D S +W L G ++ +K +S + C++S
Sbjct: 457 --DDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVD-WQSIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
VW +G T GH V +DV + S H+++ D + +LWDL G T+ S
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS 358
Query: 354 S 356
+
Sbjct: 359 N 359
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/110 (18%), Positives = 45/110 (40%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
+ HE I + LF+ +D +W + +G + + G G + + V +
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNK 286
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKA 416
+I ++ +WD+ +G+ T+ T + + C S + + + A
Sbjct: 287 SVIAATSSNNLFVWDVSSGRVRHTL-TGHTDKVCAVDVSKFSSRHVVSAA 335
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 132 EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWD 311
+G +FS D +W G+ L GH V + + ++T G D+ ++D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 312 LETGKNIATIKTNSSVRTCNFSFS 383
T + T++ + + N+S S
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRS 451
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 87 LQGHERAITQIKYNR-EGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
L+GH + + ++ + +LFS + D N+ + LG+ +GH V +D
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ TG D + RLWDL+ I T+ ++
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHN 285
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ-SIH 269
GH + + + G + S++ D+ V+ + VW + + + +I
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 270 LITGGGDSSCRLWDLETGKNIATI 341
+ GG +S +LWD + + I+T+
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTL 141
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ--S 263
+GHE IT + + L+ SA+ D VW +G + GH G V + + S
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQAS 403
Query: 264 IH-LITGGGDSSCRLWD 311
++ L++ D +CR+WD
Sbjct: 404 VYQLLSSSDDGTCRIWD 420
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/104 (24%), Positives = 46/104 (44%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH A+ ++R G + + + D +W L + GH G + L V +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAA 398
+ + D R+W L G I+ ++ ++ T +FS QA+
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTA-IAFSPRQAS 403
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 120 KYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSC 299
K++R +L + AKP+ + + GH V+C D ++ITG D
Sbjct: 271 KHHRAPSILSACHAIAKPSTMVQ-KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLV 329
Query: 300 RLWDLETGKNIATIK 344
++W +ET +A+ +
Sbjct: 330 KIWSMETALCLASCR 344
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 102 RAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV-DWQSIHLIT 278
R + I ++ + + +A D + VW + +G + GH + LDV + ++
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMS 657
Query: 279 GGGDSSCRLWDLETG 323
G D +WD+ G
Sbjct: 658 AGYDGKTIIWDIWEG 672
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGG 284
AI ++Y+ +L +A +D N+W +G+++ GH W + LITG
Sbjct: 982 AILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGH--TKWIRSIRMVEDTLITGS 1039
Query: 285 GDSSCRLWDLETGKNIATIKTNSS-VRTCNFS 377
D + R+W + G A + ++ V++ +S
Sbjct: 1040 DDWTARVWSVSRGSCDAVLACHAGPVQSVEYS 1071
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH+ ++ +K G+ + +AA D +W + T + L+ D +
Sbjct: 935 LKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 267 HLITGGGDSSCRLWDLETGKNIATIK 344
L G D+ +WD+ +GK + +K
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLK 1019
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH + I +R G ++ S + D VW + L GH V C+ +
Sbjct: 895 LKGHTGTVRAISSDR-GKIV-SGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGE 951
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSS 356
++T D + ++WD+ T +AT+ SS
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSS 981
Score = 31.9 bits (69), Expect = 0.26
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH + I I+ D L + + D VW G H G V ++
Sbjct: 1018 LKGHTKWIRSIRMVE--DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 267 HLITGGGDSSCRLWDLETG--KNIATIKTNSS 356
+ITG D R W+ + G K + I +SS
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKCVKNITLHSS 1107
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 41.1 bits (92), Expect = 4e-04
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH+ I +K++ + L S D K VW + + + F H V + W
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKA--IAWSPH 345
Query: 267 H---LITGGG--DSSCRLWDLETGKNIATIKTNSSVRTCNFSFS 383
H L +GGG D R W+ T ++ + TNS V CN +S
Sbjct: 346 HFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV--CNLVWS 387
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
VW +L T GH V L V ++TG GD + R W++
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +3
Query: 108 ITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGG 287
I + + + +F+AA D+ W +G+ TF GH + + + ++TG
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 288 DSSCRLWDLETGKNIATI 341
D + R+WD +TGK + I
Sbjct: 222 DGTARIWDCKTGKCVKVI 239
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 243 LDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ VD QS + T GDS WD+E+GK T K +S
Sbjct: 165 MSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 66 LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL 245
LN + +GH + +++ G S + D +W + L GH
Sbjct: 449 LNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH-----LS 503
Query: 246 DVDW--QSIHLITGGGDSSCRLWDLETGK 326
DVDW ++ TG D + RLWD++TG+
Sbjct: 504 DVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +3
Query: 45 KIYSID*LNMKPL-MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNG 221
+I+S+D ++PL ++ GH ++ + ++ + + + + D +W GE + F G
Sbjct: 485 RIWSMD--RIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG 539
Query: 222 HGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK-TNSSVRTCNFS 377
H +V L + ++ +G D + +WDL T + I + NS V + ++S
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 592
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/80 (21%), Positives = 32/80 (40%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + + + +G + S +D +W + GH VW L + L
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 273 ITGGGDSSCRLWDLETGKNI 332
+G D + +LWD+ + +
Sbjct: 599 ASGSADCTVKLWDVTSSTKL 618
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/78 (20%), Positives = 32/78 (41%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQS 263
+L GH + ++ GD + S++ D +W + L + GH VW
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 264 IHLITGGGDSSCRLWDLE 317
+ + D + R+W ++
Sbjct: 473 HYFASCSHDRTARIWSMD 490
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
L GH + + Y+ EG LL S + D +W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 192 NGERLGTFN-GHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK-TNSSVRT 365
NG R T GH G V+ +++ D++ RLW + N+ K N V
Sbjct: 406 NGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 465
Query: 366 CNFS-FSAYQAAYTTDK 413
FS F Y A+ + D+
Sbjct: 466 AQFSPFGHYFASCSHDR 482
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/113 (20%), Positives = 49/113 (43%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
GH + + ++ LL S KD +W + +G L + +GH +V + + L
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPC 431
+T D +L+D+ T K + + + ++ T ++ + + + G C
Sbjct: 326 LTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH+ + +K+N+ G+ L +A+KD ++ + L +F GH V L W
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL--AWHPC 363
Query: 267 H---LITGGGDSSCRLW 308
H ++G D S W
Sbjct: 364 HEEYFVSGSSDGSICHW 380
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFN-GHGGVVWCLD-VDWQ 260
L+GH+ + + +N G LL S + D + N+W + + L + + GH ++C V
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 261 SIHL-ITGGGDSSCRLWD 311
S L ++G GD+ RL++
Sbjct: 106 SDELVVSGAGDAEVRLFN 123
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVD---WQ 260
+GHE IT + + + SA+ D VW +G + GH G V +
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 261 SIHLITGGGDSSCRLWD 311
L++ D +CR+WD
Sbjct: 344 PYQLLSSSDDGTCRIWD 360
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH A+ +R G + + + D VW L + GH G + L V +I
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
+ + D R+W L G ++ ++ ++ T
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVT 333
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 198 ERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK 344
+ + GH V+C +D ++ITG D ++W ++T +A+ +
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCR 284
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 102 RAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDV-DWQSIHLIT 278
R + I ++ + + +A D + VW + +G + + GH + +DV + ++
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604
Query: 279 GGGDSSCRLWDLETG 323
G D +WD+ G
Sbjct: 605 AGYDGKTIVWDIWEG 619
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VD 254
+ +GH + Q+ +N ++ + SA+ D +W + + T + H V C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATIK 344
+LITG D + ++WD +T + T++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGD--LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L H++ + + Y GD L + + D VW + T GH V + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 261 SIHLITGGGDSSCRLWDLET 320
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 219 GHGGVVWCLD-VDWQSIHLITGGGDSSCRLWDLETG 323
GH G V C V + HLIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLF-SAAKDAKPNVWWSLNGER-LGTFNGHGGVVWCLDVDWQSI 266
GH + + + F S + D+ +W + R + TF+GH G V +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 267 HLITGGGDSSCRLWDLETGKNI 332
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 210 TFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNFS 377
T GH G V+ LD + +++ D +W+ T + IK + V TC FS
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFS 116
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
LQGH + + + E + + SA++D + VW +L ++ V
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 267 HLITGGGDSSCRLWDLET 320
+ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 219 GHGGVVWCLD-VDWQSIHLITGGGDSSCRLWDLETG 323
GH G V C V + HLIT GD +C LWD+ TG
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLF-SAAKDAKPNVWWSLNGER-LGTFNGHGGVVWCLDVDWQSI 266
GH + + + F S + D+ +W + R + TF+GH G V +
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 267 HLITGGGDSSCRLWDLETGKNI 332
TG D +CRL+D+ TG +
Sbjct: 200 RFGTGSDDGTCRLYDIRTGHQL 221
Score = 31.9 bits (69), Expect = 0.26
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSA-AKDAKPNVWWSLNGE---RLGTF-NGHGGVVWCLDVDW 257
G +T I ++ G LLF+ A + VW +L GE LG + H + CL +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 289
Query: 258 QSIHLITGGGDSSCRLW 308
L TG DS+ ++W
Sbjct: 290 DGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 219 GHGGVVWCLD-VDWQSIHLITGGGDSSCRLWDLETG 323
GH G V C V + HLIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLF-SAAKDAKPNVWWSLNGER-LGTFNGHGGVVWCLDVDWQSI 266
GH + + + F S + D+ +W + R + TF+GH G V +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 267 HLITGGGDSSCRLWDLETGKNI 332
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 31.9 bits (69), Expect = 0.26
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSA-AKDAKPNVWWSLNGE---RLGTF-NGHGGVVWCLDVDW 257
G +T I ++ G LLF+ A + VW +L GE LG + H + CL +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 258 QSIHLITGGGDSSCRLW 308
L TG DS+ ++W
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 210 TFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNFS 377
T GH G V+ LD + +++ D +W+ T + IK + V TC FS
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFS 116
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
LQGH + + + E + + SA++D + VW +L ++ V
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 267 HLITGGGDSSCRLWDLET 320
+ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG---TFNGHGGVVWCLDVDW 257
L GH + +T +K+ + DL+ +A+ D +W + T N H V + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ + ++ D + +DL +G +A + +S
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 111 TQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGD 290
T ++ +G +L + + +W + + F+GH G V + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 291 SSCRLWDLETGKN 329
RLWDL +N
Sbjct: 417 -GVRLWDLRKLRN 428
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG---TFNGHGGVVWCLDVDW 257
L GH + +T +K+ + DL+ +A+ D +W + T N H V + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ + ++ D + +DL +G +A + +S
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 111 TQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGD 290
T ++ +G +L + + +W + + F+GH G V + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 291 SSCRLWDLETGKN 329
RLWDL +N
Sbjct: 417 -GVRLWDLRKLRN 428
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTF---NGHGGVVWCLDVDWQSI 266
H + I+Y+ +G + + D K ++ G+++G +GH G ++ + S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 267 HLITGGGDSSCRLWDL-ETGKNIATIKTNS 353
++T D S ++W++ E G + IKT S
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSVIKTLS 139
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVW----CLDVDWQ- 260
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 261 -SIHLITGGGDSSCRLWDLETG 323
+LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVW----CLDVDWQ- 260
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 261 -SIHLITGGGDSSCRLWDLETG 323
+LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVW-WSLNGERLGTFNGH-GGVVWCLDVDWQ 260
L GHE + +++N GD+L S + D + +W W +L +GH V + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 261 SIH-LITGGGDSSCRLWD-LETGK 326
+IT G D RL LE GK
Sbjct: 111 DDRTIITSGADGQVRLGQILENGK 134
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG-TFNGHGGVVWCLDVDWQS 263
LQ H I + + L +A+ D +W +++G +L GH VW
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIW-NVDGFKLEKVLTGHQRWVWDCVFSVDG 265
Query: 264 IHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
L+T D + RLW + GK + + + C
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +3
Query: 45 KIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGH 224
KI+++D ++ + L GH+R + ++ +G+ L +A+ D +W G+ + + GH
Sbjct: 236 KIWNVDGFKLEKV-LTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Query: 225 GGVVWC 242
C
Sbjct: 295 HKATVC 300
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VD 254
+ +GH + Q+ +N ++ + SA+ D +W + + T + H V C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATI 341
+LITG D + ++WD +T + T+
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VD 254
+ +GH + Q+ +N ++ + SA+ D +W + + T + H V C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATI 341
+LITG D + ++WD +T + T+
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VD 254
+ +GH + Q+ +N ++ + SA+ D +W + + T + H V C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATI 341
+LITG D + ++WD +T + T+
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYN-REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD--VD 254
+ +GH + Q+ +N ++ + SA+ D +W + + T + H V C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATIK 344
+LITG D + ++WD +T + T++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGD--LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ 260
L H + + + Y GD L + + D VW + T GH V + +
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 261 SIHLITGGGDSSCRLWDLET 320
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 192 NGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL-ETGKNIATIKTN-SSVRT 365
NG+ +GT GH + + TG D +CR+WD + +++A +K N +VR+
Sbjct: 308 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 367
Query: 366 CNFSFSAYQAAYTTDKAMGHPCE-VFIVDTRT 458
F+ AM P + V I DT++
Sbjct: 368 IRFTSDGRYV------AMAEPADFVHIYDTKS 393
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 192 NGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL-ETGKNIATIKTN-SSVRT 365
NG+ +GT GH + + TG D +CR+WD + +++A +K N +VR+
Sbjct: 302 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 361
Query: 366 CNFSFSAYQAAYTTDKAMGHPCE-VFIVDTRT 458
F+ AM P + V I DT++
Sbjct: 362 IRFTSDGRYV------AMAEPADFVHIYDTKS 387
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGH---GGVVWCLDVD 254
+L+GH ++ + ++ LLF+ + D + +W ++ + + H GV+
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASP 71
Query: 255 W-QSIHLITGGGDSSCRLWDLETG 323
W +I+ G D + + WD+E G
Sbjct: 72 WLGEDKIISQGRDGTVKCWDIEDG 95
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 37.5 bits (83), Expect = 0.005
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLD-VDWQS 263
L GH+ + +K++ + L S D + VW + + + + H V + QS
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 264 IHLITGGG--DSSCRLWDLETGKNIATIKTNSSVRTCNFSFS 383
L +GGG D R W+ G + +I T S V CN ++S
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV--CNLAWS 393
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/97 (19%), Positives = 34/97 (35%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
G ++ +++ REG + + VW +R+ T GH L W S L
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVL--AWNSRIL 270
Query: 273 ITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFS 383
+G D + D+ + + C +S
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS 307
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+W + ++ T GH V L ++TG GD + R W++
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL 245
L GH++ +T I D L++A+KD +W +G+ G N GG V C+
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN-LGGEVGCI 191
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
+ H R + + +G L + D ++W E + F GH V CL + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 270 LITGGGDSSCRLWDLE 317
L +G D + ++W++E
Sbjct: 279 LYSGSFDRTVKVWNVE 294
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVW----WSLNGER--LGTFNGHGGVV----WC 242
GH + +K++ G L S D ++W S N R L F H V WC
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 243 LDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
+Q+ L TGGG D W+ TG + +++T S V
Sbjct: 294 ---PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV 331
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAK-PNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH 269
GHE + + +N +L + D K N + +GT+ GH V L
Sbjct: 193 GHESRVGSLAWNNH--ILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKK 250
Query: 270 LITGGGDSSCRLWD 311
L +GG D+ +WD
Sbjct: 251 LASGGNDNVVHIWD 264
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVW-----WSLNGER--LGTFNGHGGVV----W 239
GH + +K++ G L S D ++W S N R L F H V W
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 240 CLDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
C +Q+ L TGGG D + W+ TG + +++T S V
Sbjct: 276 C---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV 314
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 36.7 bits (81), Expect = 0.009
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNG-HGGVVWCLDVDWQS 263
L+GH IT + YN + + L S + V +G R +G V+ LD S
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 264 IHL-ITGGGDSSCRLWDLETGKN--IATIKTNSSVRTCNFSFSAYQAAYTTDKAMGHPCE 434
HL +T G D + LWD TG++ ++ +K +S+ T FS M
Sbjct: 191 RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSA-PTAGVCFSPSNEKIIASVGMDKKLY 248
Query: 435 VFIVDTRTIDESISDQAP 488
+ +R I+ +AP
Sbjct: 249 TYDSGSRRSSSCIAYEAP 266
Score = 33.1 bits (72), Expect = 0.11
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTF-----NGHGGVVWCLD-VDWQ-- 260
A+ +K+N ++ S +D K ++W NG+ LGT +G CL + +
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRK-NGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 261 -SIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
S ++ +GG ++WDL+ I +K ++S T
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTIT 139
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 36.7 bits (81), Expect = 0.009
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQ-S 263
L GH+ + +K++ + L S D + VW + + + ++ H V + W
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKA--IAWSPH 388
Query: 264 IH--LITGGG--DSSCRLWDLETGKNIATIKTNSSVRTCNFSFS 383
+H L +GGG D R W+ T ++++I T S V CN ++S
Sbjct: 389 VHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQV--CNLAWS 430
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
VW ++ T GH V L V ++TG GD + R W++
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 36.7 bits (81), Expect = 0.009
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Frame = +3
Query: 69 NMKPL-MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGE-----RLGTFNGHGG 230
NM+ L +L G E +T ++++++G+ L++ + + W + +L +
Sbjct: 244 NMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTN 303
Query: 231 VVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSAY 389
D++ HL TGG D ++DL+TG ++ + S FSF Y
Sbjct: 304 QRVFFDIEPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNA-FSFHPY 355
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 87 LQGHERAITQIKYNREG-DLLFSAAKDAKPNVWWSLNGER--LGTFNGHGGVVWCLDVDW 257
+ GH+ A T + YN +LL + +KD +W N E + T N + G ++ +
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 258 QSIHLIT-GGGDSSCRLWDLETGKNIATIKTNSSVR 362
+ L+ GG +LWD + N+++ + VR
Sbjct: 425 DNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVR 460
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 222 HGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKN 329
H G V L ++L++ G DS RLWD+E+G+N
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 141 LLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIH---LITGGGDSSCRLWD 311
L+ + +D + + +G T +GH V + V+W + L TGG D + R WD
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGV--MSVEWSTSSEWVLYTGGCDGAIRFWD 219
Query: 312 L 314
+
Sbjct: 220 I 220
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 35.9 bits (79), Expect = 0.016
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDW-QSIHLITGGGDSSCRLWDLETGKNIATIKT 347
P +SL+ + + +F GH V LD+ W +S L++ D + RLWD+ET +
Sbjct: 501 PETVFSLSDKPICSFTGHLDDV--LDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAH 558
Query: 348 NSSVRTCNFSFSAYQAAYTTDKAMGHPCEVFIVDTRTIDE 467
N V TC F+ Y ++ ++ + R + E
Sbjct: 559 NDYV-TC-VQFNPLDEDYFISGSLDAKIRIWNISNRQVVE 596
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+Q H+ I +K++ + LL SA +D +VW
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.9 bits (79), Expect = 0.016
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH ++ + ++ + D++ S ++D VW + L TF W L V +
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH-PEM 302
Query: 267 HLITGGGDSSCRLWDLE 317
+L+ G DS ++ LE
Sbjct: 303 NLLAAGHDSGMIVFKLE 319
Score = 33.1 bits (72), Expect = 0.11
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH I ++++ E + SA+ D +W + + GH V C +
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 267 HLITGGGDSSCRLWDL 314
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWW--SLNGERLGTFNGHGGVVWCLDVDW 257
+L+GH+R + ++ L+ S A D + +W + T GH V +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIK 344
+ +++ D S R+WD + T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGLQTFR 287
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDS-SCRLWDLETGKNIATIKTNS 353
VW + + H VW +D L+ G D S +LW + G +I TIKT +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 354 SVRTCNF 374
++ F
Sbjct: 620 NICCVQF 626
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 177 VWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDS-SCRLWDLETGKNIATIKTNS 353
VW + + H VW +D L+ G D S +LW + G +I TIKT +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 354 SVRTCNF 374
++ F
Sbjct: 620 NICCVQF 626
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGDL-LFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHL 272
H I+ K+++ L SA+ D K +W L + H V D W+ +
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESV 415
Query: 273 ITGGGDSSCRL 305
++GG DS+ R+
Sbjct: 416 VSGGADSNLRI 426
Score = 27.5 bits (58), Expect(2) = 0.020
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 195 GERLGTFNGHGGVVWCLDVDWQSIHLI-TGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
GE + + GH V V W +I + D S R WD+ETGK+ + ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
Score = 27.1 bits (57), Expect(2) = 0.020
Identities = 8/33 (24%), Positives = 21/33 (63%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+L+GH+ ++ + + G+++ S++ D N+W
Sbjct: 200 ILRGHKASVQSVSAQKSGNMVCSSSWDCTINLW 232
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 213 FNGHGGVVWCLDVDWQS---IHLITGGGDSSCRLWDLETGKNIATIKTNS 353
F+ H W W HL++ D LWDL T ++ I T++
Sbjct: 354 FSSHSS--WISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHN 401
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 27.5 bits (58), Expect(2) = 0.020
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 195 GERLGTFNGHGGVVWCLDVDWQSIHLI-TGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
GE + + GH V V W +I + D S R WD+ETGK+ + ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
Score = 27.1 bits (57), Expect(2) = 0.020
Identities = 8/33 (24%), Positives = 21/33 (63%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+L+GH+ ++ + + G+++ S++ D N+W
Sbjct: 200 ILRGHKASVQSVSAQKSGNMVCSSSWDCTINLW 232
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 35.5 bits (78), Expect = 0.021
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 204 LGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRT 365
L + GH G V C V Q ++ +G D + ++WDL T + I T+K ++ T
Sbjct: 251 LTSLEGHSGEVTCFAVGGQMLY--SGSVDKTIKMWDLNTLQCIMTLKQHTGTVT 302
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.5 bits (78), Expect = 0.021
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDS 293
+ +N EG +L + A+D V+ W L H V CL L++ GG
Sbjct: 159 LAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVK-CLTFSESGQFLVSLGGPV 217
Query: 294 SCRLWDLETGKNIATI--KTNSSVRTCNFS 377
CR+WD+ +A++ + + +C FS
Sbjct: 218 -CRVWDVNASAAVASLSKEKDEMFASCRFS 246
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.1 bits (77), Expect = 0.028
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVW-WSLNGER-----LGTFNGHGGVV----WC 242
GH + +K++ G+ S D ++W SL + L F H V WC
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 243 LDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
+Q+ L TGGG D + W+ TG + +++T S V
Sbjct: 310 ---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV 347
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSS-VRTCNF 374
++ TG DSS ++DL +G +A +K +SS VR CN+
Sbjct: 415 YIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW 451
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 108 ITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGG 287
I + N EG L +W G+ L ++GH V CL L++G
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 288 DSSCRLWDL 314
D S R+W L
Sbjct: 141 DGSIRVWSL 149
Score = 34.7 bits (76), Expect = 0.037
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSL---------NGERL--GTFNGHGGVVW 239
GH R++T + ++ + LL S ++D VW + G L FN H V
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 240 CLDVDWQSIH--LITGGGDSSCRLWDLETGKNIATI 341
+ +D+ + +I+ D +C++W L GK + I
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L+GH ++ + ++ + D++ S ++D VW + + TF W L V I
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH-PEI 302
Query: 267 HLITGGGDSSCRLWDLE 317
+L+ G D+ ++ LE
Sbjct: 303 NLLAAGHDNGMIVFKLE 319
Score = 34.7 bits (76), Expect = 0.037
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI 266
L GH I ++++ E + SA+ D +W + + GH V C +
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 267 HLITGGGDSSCRLWDL 314
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 33.5 bits (73), Expect = 0.086
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWW--SLNGERLGTFNGHGGVVWCLDVDW 257
+L+GH+R + ++ L+ S A D + +W + T GH V +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 258 QSIHLITGGGDSSCRLWDLETGKNIATIK 344
+ +++ D S R+WD I T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGIQTFR 287
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.7 bits (76), Expect = 0.037
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG---TFNGHGGVVWCLDVD 254
+L H+ + ++++ G L +A+ D +W L+ ++ T H V +
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS 356
L+T G +LWD++TG T N++
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNT 312
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = +3
Query: 75 KPLMLQGHERAITQIKY---NREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL 245
+PL GH ++ I+ + + S ++D++ +W N + L +GH V C
Sbjct: 432 QPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNC- 490
Query: 246 DVDWQSIH---LITGGGDSSCRLW 308
V W + L + D + R+W
Sbjct: 491 -VSWNPKNPRMLASASDDQTIRIW 513
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 34.7 bits (76), Expect = 0.037
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 213 FNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ GH G V + D + +G D S R+W++ETG+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 34.3 bits (75), Expect = 0.049
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDW-QSIHLITGGGDSSCRLWDLETGKNIATIKT 347
P + L+ + + +F GH V LD+ W +S HL++ D + RLWDL + K + +
Sbjct: 450 PEAVFGLSEKPVCSFVGHLDDV--LDLSWSKSQHLLSSSMDKTVRLWDL-SSKTCLKVFS 506
Query: 348 NSSVRTC 368
+S TC
Sbjct: 507 HSDYVTC 513
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG 209
+Q H+ +I IK++ +G L SA +D +W + ER G
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 34.3 bits (75), Expect = 0.049
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 150 SAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLI-TGGGDSSCRLWDLE 317
S ++D++ +W G+ + GH G V C+ ++H++ + D + R+W L+
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 34.3 bits (75), Expect = 0.049
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 222 HGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKN 329
H GVV L ++L++ G S RLWD+E+G+N
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRN 346
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 34.3 bits (75), Expect = 0.049
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWW----SLNG-ERLGTFN-GHGGVVWC 242
L+L + IT ++++ +G + SA +D K V L G + +F GH + C
Sbjct: 149 LLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITC 208
Query: 243 LDV----DWQSIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
+ +L++G GDS+ RLWD+ +G + T + ++
Sbjct: 209 TAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDTCEVST 249
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTF-NGHG-GVVWCLDVDWQSI 266
G AI Q++Y+ G + +A+KD ++ ++ + + + N HG V
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 267 HLITGGGDSSCRLWDLETGKNI 332
+++ G DS+ +LW++ +G+ +
Sbjct: 232 FVLSSGKDSTVKLWEIGSGRMV 253
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTF-NGHG-GVVWCLDVDWQSI 266
G AI Q++Y+ G + +A+KD ++ ++ + + + N HG V
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 267 HLITGGGDSSCRLWDLETGKNI 332
+++ G DS+ +LW++ +G+ +
Sbjct: 324 FVLSSGKDSTVKLWEIGSGRMV 345
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 33.1 bits (72), Expect = 0.11
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVW----WSLNG--ERLGTFNGHGGVV----W 239
+GH + + +K++ G L S D ++W S N + L H V W
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 240 CLDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
C +Q+ L TGGG D + + W+ TG + ++ T S V
Sbjct: 323 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV 361
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 33.1 bits (72), Expect = 0.11
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLFSAAKDAKPNVW----WSLNG--ERLGTFNGHGGVV----W 239
+GH + + +K++ G L S D ++W S N + L H V W
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 240 CLDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
C +Q+ L TGGG D + + W+ TG + ++ T S V
Sbjct: 313 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV 351
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGER----LGTF----NGHGGVVW 239
+L GH + + ++ D+LFS + D +W S + + + T NGH VW
Sbjct: 134 VLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 240 CLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ + ++T D + ++W + +
Sbjct: 194 SISFNAAGDKMVTCSDDLAVKIWKTDISR 222
Score = 27.9 bits (59), Expect = 4.3
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGD-LLFSAAKDAKPNVW--------WSLN-GERLGTFNGHGGVV 236
L+GH + + +N D ++ S + D +W W+ G RLG+F+G+ V
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 237 WCLDVDWQSIHLITG-GGDSSCRLWDLETGKNIATIKTNSSV 359
D +S+ ++ G + W+ +G +AT + SV
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWN-ASGSLLATCGRDKSV 116
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGG-DSSCRLWDLETGKNIATIKT 347
P +S + + + + GH + LD+ W L+ D + RLWD+ET K +
Sbjct: 488 PETVFSFSDKPVCSLKGHLDAI--LDLSWSKSQLLLSSSMDKTVRLWDIET-KTCLKLFA 544
Query: 348 NSSVRTCNFSFSAYQAAYTTDKAMGHPCEVFIVDTRTIDE 467
++ TC FS Y ++ ++ + R + E
Sbjct: 545 HNDYVTC-IQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 222 HGGVVWCLDVDWQSIHLITGGGDSSCRLWDLE 317
H G VW + + +L +GG D +W+++
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ 434
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+Q HE A+ IK++++ L S D +VW
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGG 284
++ + +G LL + + S +G+ + + GH + + L TG
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 285 GDSSCRLWDLET-GKNIATIKTN-SSVRTCNFS 377
D++CRLWD+ ++ A +K N ++R F+
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL--DVDWQ 260
L GHE+ ++ I D L++ +KD VW +G+ G GG + C+ + W
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVLSEGPWL 205
Query: 261 SIHLITGGGDSSCRLWDLET 320
+ G + + W++ET
Sbjct: 206 LV-----GMPNLVKAWNIET 220
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 204 LGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSV 359
L +GH +V + + S L TG D + R+WD +G+ +K +
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTF-NGHGGVVWCLDVDWQSIHL 272
H A++ + +R+G LL+S + D +W + + + L +F N H + + + ++ +
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS-ENGDI 222
Query: 273 ITGGGDSSCRLW 308
TG D ++W
Sbjct: 223 YTGSSDQRIKVW 234
Score = 30.7 bits (66), Expect = 0.61
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWW--SLNGERLGTFNGHGGVVWCLD--- 248
ML+GH ++ + D+L S + D +W + + L GH G V CL
Sbjct: 300 MLRGHTESVLCLAV--VSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAF 357
Query: 249 -----VDWQSIHLITGGGDSSCRLWDL 314
D S H+ +GG DS ++W +
Sbjct: 358 RDSRKADEASYHIYSGGLDSQVKVWQV 384
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
P++ L +++ + +GH G VW ++ D + L + G D +LW
Sbjct: 262 PDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWS-LNGE 200
L GH+ + Q++++ G L S D +W S LNGE
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGE 314
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGER 203
+Q HE AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGER 203
+Q HE AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 31.9 bits (69), Expect = 0.26
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 171 PNVWWSLNGERLGTFNGHGGVVWCLDVDW-QSIHLITGGGDSSCRLWDLETGKNIATIKT 347
P+ + L+ + +F GH V LD+ W +S HL++ D + RLW+L + + + +
Sbjct: 495 PDSLFGLSEKPFCSFQGHVDDV--LDLAWSKSQHLLSSSMDKTVRLWNL-SSQTCLKVFS 551
Query: 348 NSSVRTCNFSFSAYQAAYTTDKAMGHPCEVFIVDTRTI 461
+S TC F+ Y ++ V+ + R +
Sbjct: 552 HSDYVTC-IQFNPVDDRYFISGSLDAKVRVWSIPDRQV 588
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLG 209
+Q H +I IK++ +G L SA +D ++W + E+ G
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGG 284
AI I ++ +G L + +D ++ + + + G + C +L+TGG
Sbjct: 305 AINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 285 GDSSCRLWDLETGKNIA 335
D ++W +E K +A
Sbjct: 365 EDDLVQVWSMEDRKVVA 381
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 195 GERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLET-GKNIATIKTN-SSVRTC 368
G+ L T +GH + TG D +CR+WD+ K++A ++ N ++R+
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
Query: 369 NFS 377
++
Sbjct: 367 RYT 369
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNG-ERLGTFNGHGGVVWCLDVDWQ 260
+L E A+T + N +++ + D N W GT +GH V CL
Sbjct: 329 VLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGTIHGHRMAVLCLAT--A 386
Query: 261 SIHLITGGGDSSCRLW 308
L++GG D + +W
Sbjct: 387 GSLLLSGGADKNICVW 402
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 31.5 bits (68), Expect = 0.35
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVW--WSLNGER-----LGTFNGHGGVV----W 239
GH + +K++ G L S ++W S+ + L F H V W
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 240 CLDVDWQSIHLITGGG--DSSCRLWDLETGKNIATIKTNSSV 359
C +Q+ L TGGG D + W+ TG + +++T S V
Sbjct: 307 C---PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV 345
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.5 bits (68), Expect = 0.35
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDL 314
+FSA+ D +W + + F GH G V L L++ G D + RLW++
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 234 VWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATI 341
V+C+ + ++I+G D++ RLW + + + I
Sbjct: 325 VFCVKYSCDATYVISGSDDTNLRLWKAKASEQLGVI 360
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGG 284
+I I ++ +G L + +D ++ L + + + G + C +++TGG
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 285 GDSSCRLWDLETGKNIA 335
D ++W +E K +A
Sbjct: 365 EDDLVQVWSMEDRKVVA 381
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 31.5 bits (68), Expect = 0.35
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL-DVDWQSIHL 272
H AI I + + L +A+ D VW + G GH G V + S L
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 273 ITGGGDSSCRLWDL 314
++G D LWDL
Sbjct: 187 VSGSRDGCFALWDL 200
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 216 NGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
NGH G +W L +L TGG D ++W
Sbjct: 195 NGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERL----GTFNGHGGVVWCLDVD 254
L+ H+ A+ + N +G +LFS + D VW + G GH + L +
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI--LSLF 333
Query: 255 WQSIHLITGGGDSSCRLW 308
S L++G D + R+W
Sbjct: 334 NVSDLLLSGSADRTVRIW 351
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +3
Query: 210 TFNGHG-GVV---WCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS 356
TF GH GV+ WC S++L+T G D+ W+ +TGK +A + T +
Sbjct: 247 TFVGHQRGVIAMEWCPS---DSLYLLTCGKDNRTICWNTKTGKIVAELPTGQN 296
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWW---SLNGE----RLGTFNGHGGVVWCL 245
LQ H +T ++++ + LL S ++D +V+ + NGE + H ++W
Sbjct: 643 LQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWAC 702
Query: 246 DVDWQSIHLITGGGDSSCRLWDLETGKNIATI 341
+ T D + ++W +E I I
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSVENDARIKQI 734
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 31.1 bits (67), Expect = 0.46
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSV 359
H+ TG GD++ + W L+ G + T+ + SV
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSV 629
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGV-VWCLDVDW--QSIHLITGGG 287
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 270
Query: 288 DSSCRLWDLETGKNI 332
D S W + +GK +
Sbjct: 271 DGSTHAWGVRSGKQV 285
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGV-VWCLDVDW--QSIHLITGGG 287
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 267
Query: 288 DSSCRLWDLETGKNI 332
D S W + +GK +
Sbjct: 268 DGSTHAWGVRSGKQV 282
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNG-ERLGTFNGHGGVVWCLDVDWQ 260
+L E A+T + N +++ + D N W GT GH V CL
Sbjct: 333 VLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGS 392
Query: 261 SIHLITGGGDSSCRLW 308
+ ++GG D + +W
Sbjct: 393 LV--LSGGADKNICVW 406
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFN---GHGGVVWCLDVDWQSI 266
H + +++ +G + + D K ++ E LG + GH G ++ +
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 267 HLITGGGDSSCRLWDL 314
++T D S ++WD+
Sbjct: 246 QVLTVSADKSAKIWDI 261
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 48 IYSID*LNM-KPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGE-RLGTFNG 221
+YSI+ ++ + +L+ H AI+ I+Y+ + + SA + + VW ++ E +L
Sbjct: 473 LYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLY 532
Query: 222 HGGVVWCLDVDWQSIHLITGGGDSSCRLWDLE 317
H + CL S + TG D+ +++++
Sbjct: 533 HSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 102 RAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITG 281
R+ + I +G+++ D + S + L T GH V CL + + L+TG
Sbjct: 2627 RSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTG 2686
Query: 282 GGDSSCRLW 308
DS+ LW
Sbjct: 2687 SRDSTVLLW 2695
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 30.3 bits (65), Expect = 0.80
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 MLQGHERAITQIKYNREGDLLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDWQ 260
+L E A+T + + +++ + D N W S G GH V CL +
Sbjct: 319 VLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGN 378
Query: 261 SIHLITGGGDSSCRLW 308
L++G D + +W
Sbjct: 379 L--LLSGSADKNICVW 392
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.3 bits (65), Expect = 0.80
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNS-SVRTCNFSFSAY 389
GV+ C+ + + L G D C +WD ET I+ N S + S+S Y
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKY 78
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSI--HLITGGGD 290
+ +N G LL + D +W + V W L+ D
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 291 SSCRLWDLETGKNIA 335
S LWD+ TG+ IA
Sbjct: 89 KSLTLWDVSTGEKIA 103
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 30.3 bits (65), Expect = 0.80
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 195 GERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLET-GKNIATIKTN-SSVRTC 368
G+ L T +GH + + TG D +CR+WD+ +++ +K N ++R+
Sbjct: 309 GKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
Query: 369 NFS 377
++
Sbjct: 369 RYT 371
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 243 LDVDWQ--SIHLITGGGDSSCRLWDLETG 323
LD+ W +LI+G D+SC +WD+ G
Sbjct: 57 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +3
Query: 33 VFVHKIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGT 212
V+V ++S D ++ + H + +K++++G L S D ++ G +
Sbjct: 185 VYVWNVWSNDKKKVRAFL--HHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQS 242
Query: 213 FNGHGGVVWCLDVDWQSIHL-ITGGGDSSCRLWDLETGK 326
F VV + + ++ ++GG S RLWD+ K
Sbjct: 243 FK-EDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANK 280
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 90 QGHERAITQIKYNREGDLLF-SAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVD-WQS 263
+GHE AI + ++ + + LF SA +D + +W + + H V L + +
Sbjct: 214 EGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNE 273
Query: 264 IHLITGGGDSSCRLWDL 314
L T DS+ L+DL
Sbjct: 274 WVLATASSDSTVALFDL 290
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 249 VDWQSIHLITGGGDSSCRLWDLETGKN 329
+ W+ +ITGG DS LWD G++
Sbjct: 157 IPWRPWEVITGGLDSKLVLWDFSKGRS 183
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 204 LGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK 344
+ T GH V + + + + T G DS R+WD+E G +IA K
Sbjct: 155 IDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASK 201
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 198 ERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
E +GT +G V L HL++ GGD +WDL T K
Sbjct: 366 ELIGTLKMNGSVR-SLAFSEDGKHLLSSGGDGQVYVWDLRTMK 407
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
+ L+GH+ A+T + ++ + + +A+KD VW
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 270 LITGGGDSSCRLWDLET-GKNIATIKTN-SSVRTCNFS 377
L TG D++CRLWD+ +++ +K N ++R F+
Sbjct: 334 LATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNG-ERLGTFNGHGGVVWCLDVDWQSIHLITG 281
A+T I ++ L++ + D N W N + G GH V CL + +G
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNL--MFSG 359
Query: 282 GGDSSCRLW 308
D R+W
Sbjct: 360 SADLGIRVW 368
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +3
Query: 54 SID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGV 233
S+ L+ K L R+ ++ +G L S D + G+ L GH
Sbjct: 88 SLQHLSAKYCPLVPPPRSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRT 147
Query: 234 VWCLDVDWQSIHLITGGG-DSSCRLWDLETGKNIAT 338
W + + ++ G D RLW+ +TG+ I T
Sbjct: 148 PWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +3
Query: 54 SID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGV 233
S+ L+ K L R+ ++ +G L S D + G+ L GH
Sbjct: 88 SLQHLSAKYCPLVPPPRSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRT 147
Query: 234 VWCLDVDWQSIHLITGGG-DSSCRLWDLETGKNIAT 338
W + + ++ G D RLW+ +TG+ I T
Sbjct: 148 PWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 225 GGVVWCLDVDWQSIHLITGGG-DSSCRLWDLETGKNIATIK 344
G ++ L +W++ +++ G D ++WD+ TGK T++
Sbjct: 214 GQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTME 254
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 48 IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG 227
I+ I+ N + + +GH + + ++ G+L+ S ++DA +W +G+ + + G
Sbjct: 658 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSG 716
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ L+ GG + LW+ K
Sbjct: 717 NKFHSVVFHPSYPDLLVIGGYQAIELWNTMENK 749
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 48 IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG 227
I+ I+ N + + +GH + + ++ G+L+ S ++DA +W +G+ + + G
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSG 718
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ L+ GG + LW+ K
Sbjct: 719 NKFHSVVFHPSYPDLLVIGGYQAIELWNTMENK 751
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 48 IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG 227
I+ I+ N + + +GH + + ++ G+L+ S ++DA +W +G+ + + G
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSG 718
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ L+ GG + LW+ K
Sbjct: 719 NKFHSVVFHPSYPDLLVIGGYQAIELWNTMENK 751
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 48 IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG 227
I+ I+ N + + +GH + + ++ G+L+ S ++DA +W +G+ + + G
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSG 718
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ L+ GG + LW+ K
Sbjct: 719 NKFHSVVFHPSYPDLLVIGGYQAIELWNTMENK 751
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 48 IYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHG 227
I+ I+ N + + +GH + + ++ G+L+ S ++DA +W +G+ + + G
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSG 718
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ L+ GG + LW+ K
Sbjct: 719 NKFHSVVFHPSYPDLLVIGGYQAIELWNTMENK 751
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 93 GHERAITQIKYNREGDLLFSAAKDAKPNVWW-SLNG--ERLGTFNGHGGVVWCLDVDW 257
GHE + ++ + G + +A+ D + S NG ++L T GH G VW +V W
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW--EVAW 64
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 96 HERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLI 275
H++ + + +G +FS D + +W L+G + T H G + + L
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 276 TGGGDSSCRLWD 311
TG D + + WD
Sbjct: 131 TGSWDKTLKYWD 142
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 189 LNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
L+ + G + G W D ++ + G+SS + WDL T K + +I+ ++ VR
Sbjct: 160 LSKDSAGMLHSLSGGAW----DPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAHVRGV 214
Query: 369 NFS 377
+++
Sbjct: 215 DYN 217
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 286 PPPVIR*IDCQSTSRHHTTPP*PLNVPSRSP 194
PPP ++ Q RHH PP P P RSP
Sbjct: 118 PPPPSTAVEYQPHHRHHPPPP-PPPPPPRSP 147
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 90 QGHERAITQIKYNREG----DLLFSAAKDAKPNVWWSLNGERLGTFN-GHGGVVWCLDVD 254
+GH + QI ++ + +L S + D W + + +++ + G+ ++
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYG 139
Query: 255 WQSIHLITGGGDSSCRLWDLETGKNIATIK 344
+ +L+ GG LWD K +A ++
Sbjct: 140 GAADNLLAGGCKEQVLLWDWRNSKQVACLE 169
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDS 293
+ +N++G +L + A+D V+ W L H V L L++ G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFSESGKFLVSLGAPL 206
Query: 294 SCRLWDLETGKNIATI--KTNSSVRTCNFS 377
CR+WD+ IA++ + + +C FS
Sbjct: 207 -CRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 117 IKYNREGDLLFSAAKDAKPNVW-WSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDS 293
+ +N++G +L + A+D V+ W L H V L L++ G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFSESGKFLVSLGAPL 206
Query: 294 SCRLWDLETGKNIATI--KTNSSVRTCNFS 377
CR+WD+ IA++ + + +C FS
Sbjct: 207 -CRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +3
Query: 207 GTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFSFSA 386
G N H + + +D + I ++GG D R+W +++G+ ++ K ++SV + +SA
Sbjct: 384 GHVNSHTPIEFGIDPSERFI--LSGGDDCYTRIWSIKSGQLMSENKFSNSVPSV-VCWSA 440
Query: 387 YQAAYTTDKAMGH 425
+ ++GH
Sbjct: 441 DERQRDRKDSIGH 453
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
++++G GD + W++E +A + N V +C
Sbjct: 258 YVLSGSGDGTLHAWNIENPSEVARWENNIGVVSC 291
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Frame = +3
Query: 219 GHGGVVWCL-------DVDW-QSIH-LITGGGDSSCRLWDLETGKNI 332
GH G V CL D + S H LI+G D + R+WDLE+G I
Sbjct: 526 GHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVI 572
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 204 LGTFNGHGGVVWCLDVD-WQSIHLITGGGDSSCRLWDLETGKNIATIK 344
LG + G + W D + L++G D+ +W+L G+NI T+K
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLK 110
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
L S + D VW +NGE + T GH V + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 138 DLLF-SAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
DL F SA+ D +W +L+GE L GH +V+ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 204 LGTFNGHGGVVWCLDVD-WQSIHLITGGGDSSCRLWDLETGKNIATIK 344
LG + G + W D + L++G D+ +W+L G+NI T+K
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLK 110
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 144 LFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
L S + D VW +NGE + T GH V + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 138 DLLF-SAAKDAKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
DL F SA+ D +W +L+GE L GH +V+ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 249 VDWQ--SIHLITGGGDSSCRLWDLETGKNIATIKTNS 353
VDWQ S +L G S+ LWDLE + + ++ + S
Sbjct: 1133 VDWQQQSGYLYASGETSTVTLWDLEKEQLVRSVPSES 1169
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +3
Query: 87 LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERL-GTFNGHGGVVWCLDVDWQS 263
L E A+T + ++ G ++ + D N W G GH V CL+V
Sbjct: 291 LTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVAGSL 350
Query: 264 IHLITGGGDSSCRLW 308
+ +G D + +W
Sbjct: 351 V--FSGSADKTICVW 363
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +3
Query: 135 GDLLFSAAKDAKPNVWWSLNGER--LGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLW 308
G LLFS A D K VW + GH G V CL V S GGD L+
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 309 DLETGKNI 332
K++
Sbjct: 336 SGSLDKSV 343
>At5g23070.1 68418.m02697 thymidine kinase, putative similar to
thymidine kinase [Oryza sativa] SWISS-PROT:O81263
Length = 282
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 303 LWDLETGKNIATIKTNSSVRTCNFS 377
L + ETGK IA IK+N R C S
Sbjct: 99 LAERETGKRIAIIKSNKDTRYCTES 123
>At3g33530.1 68416.m04290 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 11
(SP:Q9BZH6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies, 3
weak)|2763187|gb|T46504.1|T46504
Length = 1345
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 267 HLITGGGDSSCRLWDLETGKNIATIKTNSSVRTCNFS 377
H++ G + R WD+ TG++ A +R FS
Sbjct: 765 HVVMGDRSGNIRWWDVTTGQSSAFNSHRDGIRRIKFS 801
>At3g23840.1 68416.m02997 transferase family protein low similarity
to hypersensitivity-related gene [Nicotiana tabacum]
GI:1171577, acetyl-CoA:benzylalcohol acetyltranferase
[Clarkia concinna] GI:6166330; contains Pfam profile
PF02458: Transferase family
Length = 420
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 509 CDLPLQDWSLVRNRFIDSSGIYNE 438
CDL +++W V +R +D S +Y++
Sbjct: 107 CDLTVEEWLRVPDRSVDESLVYHQ 130
>At2g25800.1 68415.m03096 expressed protein
Length = 996
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 331 MFLPVSRSHKRHELSPPPVIR*IDCQSTSRHHTTPP*PL 215
+F +S H + E +PPP +S+S PP PL
Sbjct: 4 LFRELSLGHSKRESTPPPPSHSATSRSSSMSSDLPPSPL 42
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 192 NGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGK 326
+ E T++ H V L+ +L +GG + +W L+TGK
Sbjct: 272 DAESCTTWHWHSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g08640.1 68414.m00959 expressed protein
Length = 294
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 418 IALSVVYAAWYALKLKLHVRTEEFVFIVAMF 326
+A+SVV++AW A+K + + +F+ V ++
Sbjct: 170 LAISVVFSAWIAIKRNVEYKPLQFMSFVFVY 200
>At2g11090.1 68415.m01187 expressed protein
Length = 151
Score = 25.0 bits (52), Expect(2) = 7.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 301 RHELSPPPVIR*IDCQSTSRHHTTP 227
RH+ + P R ++ STSRHH+TP
Sbjct: 15 RHQQTTRPRGR-VEDLSTSRHHSTP 38
Score = 20.6 bits (41), Expect(2) = 7.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 253 STSRHHTTPP*PLNVPSRSPFRDHQT 176
+T H++TP + + SP DH T
Sbjct: 46 TTRSHYSTPWSSIITSTTSPSLDHTT 71
>At4g32300.1 68417.m04596 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 821
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 129 REGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVV 236
+ GD++ S P V+WS+ R N GGVV
Sbjct: 182 KSGDMVLSV-NSLTPQVYWSMANARERIINKDGGVV 216
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 36 FVHKIYSID*LNMKPLMLQGHERAITQIKYNREGDLLFSAAKDAKPNVW 182
FV ++Y + L M +GH IT + ++ +G + S++ D +W
Sbjct: 537 FVIRLYDVVTLKMVR-EFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 69 NMKPLM-LQGHERAITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGHGGVVWCL 245
N K +M L+GH + + ++ + +L S + D ++W G GH +V +
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 246 DVDWQSIHLITGGGDSSCRLW 308
D + + D + +W
Sbjct: 167 TWDPIGSFIASQSDDKTVIIW 187
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 228 GVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIK 344
G ++ + VD S ++T G D ++D+E+GK + + K
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFK 565
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 99 ERAITQIKYNREGDLLFSAAKDAKPNVW-WS 188
E I ++ Y+ GD + + A+DA +W WS
Sbjct: 372 EEKIARLTYSPSGDYILALAEDATHKLWTWS 402
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 141 LLFSAAKDAKPNVWWSLNGER-----LGTFNGH-GGVVWCLDVDWQSIHLITGGGDSSCR 302
+LF+ VW + + E L + GH G V C V + ++ +G D + +
Sbjct: 278 MLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLY--SGSVDKTIK 335
Query: 303 LWDLETGKNIATIK 344
+WDL T + T+K
Sbjct: 336 VWDLNTLQCRMTLK 349
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 213 FNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSS 356
+ H L V +L TGG D LWD+ T +++ K ++
Sbjct: 202 YTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNN 249
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +3
Query: 105 AITQIKYNREGDLLFSAAKDAKPNVWWSLNGERLGTFNGH----GGVVWCLDVDWQSIHL 272
A+ +I EGDL P V+ ++GE T+ G G V W SIH
Sbjct: 150 ALAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKKKASPSIHN 209
Query: 273 IT 278
IT
Sbjct: 210 IT 211
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLL--FSAAKDAKPNVWWSLNGERLGTFNGHGGVVW 239
L + H + + +++ L + +D VW ++ G +L TF GH V+
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVY 512
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 81 LMLQGHERAITQIKYNREGDLL--FSAAKDAKPNVWWSLNGERLGTFNGHGGVVW 239
L + H + + +++ L + +D VW ++ G +L TF GH V+
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVY 512
>At2g27090.1 68415.m03255 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 743
Score = 26.6 bits (56), Expect = 9.9
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -2
Query: 319 VSRSHKRHELSPPPVIR*IDCQSTSRHHTTPP*PLNVPSRSPFR-DHQTF-GLASFAAEN 146
+ +S SPPP S S H T P P + PS SPF+ +H F G +S E
Sbjct: 81 IEKSVSHLSYSPPPA-------SHSHHDTYSP-PPSPPSTSPFQVNHMKFKGFSSKKVEE 132
Query: 145 KRSPSRLYLICVIARSCPCS 86
K P + V + S P S
Sbjct: 133 K--PPVSIIATVTSSSIPPS 150
>At2g23560.1 68415.m02812 hydrolase, alpha/beta fold family protein
similar to ethylene-induced esterase [Citrus sinensis]
GI:14279437, polyneuridine aldehyde esterase [Rauvolfia
serpentina] GI:6651393; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 260
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 199 SPFRDHQTFGLASFAAENKRSPSRLYLIC 113
SPF + G SF+ + S +R+Y++C
Sbjct: 179 SPFMTNNLAGTISFSEDRYGSVTRIYIVC 207
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 189 LNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
++G+RL N V L QS +L+ DS RL+D+E+ + + +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 369 NF 374
F
Sbjct: 61 CF 62
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 189 LNGERLGTFNGHGGVVWCLDVDWQSIHLITGGGDSSCRLWDLETGKNIATIKTNSSVRTC 368
++G+RL N V L QS +L+ DS RL+D+E+ + + +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 369 NF 374
F
Sbjct: 61 CF 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,877,026
Number of Sequences: 28952
Number of extensions: 254095
Number of successful extensions: 1210
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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