Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B24
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61590.1 68416.m06898 F-box family protein contains weak hit ... 32 0.41
At3g57200.1 68416.m06368 hypothetical protein 31 0.72
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 29 2.9
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 29 2.9
At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family... 29 3.9
At1g46768.1 68414.m05217 AP2 domain-containing protein RAP2.1 (R... 29 3.9
At4g38040.1 68417.m05373 exostosin family protein contains Pfam ... 29 5.1
At1g80030.3 68414.m09368 DNAJ heat shock protein, putative simil... 29 5.1
At1g80030.2 68414.m09367 DNAJ heat shock protein, putative simil... 29 5.1
At1g80030.1 68414.m09366 DNAJ heat shock protein, putative simil... 29 5.1
At1g21170.1 68414.m02647 expressed protein 29 5.1
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 6.8
At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3... 28 8.9
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 28 8.9
At1g14390.1 68414.m01706 leucine-rich repeat transmembrane prote... 28 8.9
>At3g61590.1 68416.m06898 F-box family protein contains weak hit to
Pfam PF00646: F-box domain; stamina pistilloidia (Stp) -
Pisum sativum, EMBL:AF004843
Length = 411
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 655 VSGWIGGQQKVQQRRLVPLNIWDTGGLCHQLGEAVGQGEIIGSPT 521
+SGW GG + V ++ I+ TGG H+ G IGSP+
Sbjct: 232 LSGWRGGNESVICNNVLYFMIYSTGGSDHRHGLIASNLSSIGSPS 276
>At3g57200.1 68416.m06368 hypothetical protein
Length = 504
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 721 EWCGSTDKAVIRRSKWSVDHHTVSGWIGGQQKVQQRRLV 605
+W G D V + WS+DHH G + Q+K RR V
Sbjct: 46 QWRGGLDDPV---THWSIDHHEFPGMVTTQEKRSLRRSV 81
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 305 GTGPVVRGFVDGDNRHQPGRIHTPRLYAGSCAPIRSRGIRGTKYHPEQIS--ASPSE-KG 135
G G GF G +HQ GR +TP+ G RG RG P+Q P E +G
Sbjct: 29 GRGSQRGGFQQGGGQHQGGRGYTPQPQQG------GRGGRGYGQPPQQQQQYGGPQEYQG 82
Query: 134 -GQAAPSQDGG 105
G+ P GG
Sbjct: 83 RGRGGPPHQGG 93
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 305 GTGPVVRGFVDGDNRHQPGRIHTPRLYAGSCAPIRSRGIRGTKYHPEQIS--ASPSE-KG 135
G G GF G +HQ GR +TP+ G RG RG P+Q P E +G
Sbjct: 29 GRGSQRGGFQQGGGQHQGGRGYTPQPQQG------GRGGRGYGQPPQQQQQYGGPQEYQG 82
Query: 134 -GQAAPSQDGG 105
G+ P GG
Sbjct: 83 RGRGGPPHQGG 93
>At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family
protein Common family member:At3g26910 [Arabidopsis
thaliana]
Length = 623
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 498 GPEPLTSRVGLPMISPWPTASPSW*HSPPVSQI 596
GP P LP +S PTASP++ +P +S++
Sbjct: 478 GPIPRNPVSKLPKVSSSPTASPTFVSTPKISEL 510
>At1g46768.1 68414.m05217 AP2 domain-containing protein RAP2.1
(RAP2.1) identical to AP2 domain containing protein
RAP2.1 GI:2281627 from [Arabidopsis thaliana]
Length = 153
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 473 NAHHQEWLGSRTTDLPGRAAYDFTLAY 553
N + WLGS TTD+ AYD + Y
Sbjct: 50 NKRSRLWLGSYTTDIAAARAYDVAVFY 76
>At4g38040.1 68417.m05373 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 425
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 5 VRKIKRVLSAIPHSTFNVDFSNVRGLHNNLDAVHHHLETAQPALLF 142
V +K++L IPHS F LHNNL V H + P + F
Sbjct: 368 VYNLKQILKNIPHSEFV-------SLHNNLVKVQKHFQWNSPPVKF 406
>At1g80030.3 68414.m09368 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 640 GGQQKVQQRRLVPLNIWDTGGLCHQLGEAVGQGEIIGSPTREVSGSGPQPLLVVSIKV 467
GG+ +V + P ++ +C G G GE+I R+ SG G + + SIKV
Sbjct: 243 GGRGQVMRTEQTPFGMFSQVSICPNCG---GDGEVISENCRKCSGEG-RVRIKKSIKV 296
>At1g80030.2 68414.m09367 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 640 GGQQKVQQRRLVPLNIWDTGGLCHQLGEAVGQGEIIGSPTREVSGSGPQPLLVVSIKV 467
GG+ +V + P ++ +C G G GE+I R+ SG G + + SIKV
Sbjct: 243 GGRGQVMRTEQTPFGMFSQVSICPNCG---GDGEVISENCRKCSGEG-RVRIKKSIKV 296
>At1g80030.1 68414.m09366 DNAJ heat shock protein, putative similar
to SP|Q05646 Chaperone protein dnaJ {Erysipelothrix
rhusiopathiae}; contains Pfam profiles PF00226: DnaJ
domain, PF01556: DnaJ C terminal region, PF00684: DnaJ
central domain (4 repeats)
Length = 500
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 640 GGQQKVQQRRLVPLNIWDTGGLCHQLGEAVGQGEIIGSPTREVSGSGPQPLLVVSIKV 467
GG+ +V + P ++ +C G G GE+I R+ SG G + + SIKV
Sbjct: 243 GGRGQVMRTEQTPFGMFSQVSICPNCG---GDGEVISENCRKCSGEG-RVRIKKSIKV 296
>At1g21170.1 68414.m02647 expressed protein
Length = 1090
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 714 VAARIRQ*SDDPSGASTTTLYPAGSVVSRRSNR 616
+ +++++ DDP G+ TT L+ V+ R+NR
Sbjct: 288 IESKLKRIEDDPDGSGTTHLFNCMKSVTSRANR 320
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 689 QTIQVERRPPHCIRLDRWSAEGPTEKARAPQYLGH 585
+ + VE PP LDR+ +E P+Y+ H
Sbjct: 50 EDLTVEELPPRLFALDRYPSETKMNAYSKPEYISH 84
>At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3.5)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 441 HLRRWWFLETLMLTTKSGWGPE-PLTSR--VGLPMISPW 548
+LR W L+TLMLT S P L+SR + + +++PW
Sbjct: 10 NLRLWRPLKTLMLTRVSSGAPSLILSSRTLIAVDLLAPW 48
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 547 QGEIIGSPTREVSGSGPQPLLVVSIK 470
Q +I+ P + VSG G +P++VVS K
Sbjct: 86 QSDILHWPFKVVSGPGEKPMIVVSYK 111
>At1g14390.1 68414.m01706 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:2947063 from [Arabidopsis thaliana]
Length = 747
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 440 PSAEVVVLGDFNAHHQEWL--GSRTTDLPGRAAYD--FTLAYGLSQLVTQPTRVPDIEGH 607
PS+ + FN H E G+RT LPGR + D FT+ LS L T I G
Sbjct: 63 PSSPSFKILCFNGHVTELTVTGNRTVKLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGP 122
Query: 608 EPS 616
PS
Sbjct: 123 LPS 125
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,938,810
Number of Sequences: 28952
Number of extensions: 509488
Number of successful extensions: 1340
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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