Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C07
         (837 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g54020.2 68414.m06155 myrosinase-associated protein, putative...    31   0.95 
At2g07020.1 68415.m00803 protein kinase family protein contains ...    30   1.7  
At5g14090.1 68418.m01648 hypothetical protein                          29   2.9  
At3g52160.1 68416.m05726 beta-ketoacyl-CoA synthase family prote...    29   5.1  
At4g38560.1 68417.m05459 expressed protein                             28   6.7  
At1g14270.1 68414.m01692 CAAX amino terminal protease family pro...    28   8.8  

>At1g54020.2 68414.m06155 myrosinase-associated protein, putative
           strong similarity to myrosinase-associated proteins
           GI:1769968, GI:1769970, GI:1216389,GI:1216391 from
           [Brassica napus]; contains InterPro Entry IPR001087
           Lipolytic enzyme, G-D-S-L family
          Length = 372

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 513 LACGSQAFIATLLFDPSMSALPIIAKQNSPSVGLFT 620
           + C S + +  LL  P +  L  I+ QN P+VGLFT
Sbjct: 1   MECSSVSVLGILLVFPLLHNLVTISGQNLPAVGLFT 36


>At2g07020.1 68415.m00803 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 700

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 307 DSSKLTTSDARPSVDWF*SNKSTHPITGQSSD 212
           DS     S  RPS+DWF  N+S +  +  SS+
Sbjct: 223 DSDLSFVSSDRPSMDWFEDNRSNYATSSSSSE 254


>At5g14090.1 68418.m01648 hypothetical protein 
          Length = 361

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 345 DASFKCLPYQLSKSKRAKAGLIQMFSTHRDCEST 446
           +AS +C+ Y+L  S+ AK G      T  DC+ST
Sbjct: 324 EASKRCIQYELRSSRSAKNG-EHWIKTDEDCKST 356


>At3g52160.1 68416.m05726 beta-ketoacyl-CoA synthase family protein
           beta-ketoacyl-CoA synthase - Simmondsia
           chinensis,PID:g1045614
          Length = 451

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 390 RAKAGLIQMFSTHRDCESTAYRSFSIK 470
           RAK  L+Q+  TH+  E T+Y+S  ++
Sbjct: 291 RAKYQLMQLVRTHKGMEDTSYKSIELR 317


>At4g38560.1 68417.m05459 expressed protein
          Length = 521

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 11  VFXANEKESSLVDPA----SSYMLVSKIKPCMSQCKPY*GDTANGSIYQFWFLRSYSVTW 178
           ++   E+  S++  +     SY + + +   + +     GD A+GS  Q    +SYS+  
Sbjct: 321 IYETGEEMKSMISESYVSVGSYKVRASVSSTLQKILDKHGDIASGSKLQSLRTKSYSLET 380

Query: 179 ITVVILEL 202
           +  V+LEL
Sbjct: 381 LAAVVLEL 388


>At1g14270.1 68414.m01692 CAAX amino terminal protease family
           protein contains Pfam profile PF02517: CAAX amino
           terminal protease family
          Length = 353

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 45  LILPVVICLSQRLSHACLSASRIKAIPRMAQY 140
           ++  ++ CLSQ  S  CLS SR   +P+   Y
Sbjct: 14  MVSQIISCLSQSSSLLCLSDSRRLILPKTCTY 45


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,054,477
Number of Sequences: 28952
Number of extensions: 332638
Number of successful extensions: 680
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)