Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV41049
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.74 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.7  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 481 SMLGYKKIGTEFGQIQALEEF 543
           S+ G +K GT+FGQ   LE F
Sbjct: 18  SVHGIQKWGTQFGQAPLLERF 38


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 541  ILLGPGSGRIPFQFFCNQAL 482
            IL+GPG+G  PF+ F +  L
Sbjct: 969  ILVGPGTGIAPFRGFWHHRL 988


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +3

Query: 216 DYKDPEITPSKLFE*SELNQANIFHTGKKGYWMN*KFMRRPESLWLKIY 362
           +Y DPE       E  ELN    +      YWM+      P+ +  ++Y
Sbjct: 213 EYNDPEYKLDYFMEDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLY 261


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +3

Query: 216 DYKDPEITPSKLFE*SELNQANIFHTGKKGYWMN*KFMRRPESLWLKIY 362
           +Y DPE       E  ELN    +      YWM+      P+ +  ++Y
Sbjct: 213 EYNDPEYKLDYFMEDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLY 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,809
Number of Sequences: 438
Number of extensions: 5256
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)