Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV41046
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   2.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -1

Query: 490 MESN*FCSRYFSYFVNESKTKKYFYYRRHLKHVTHYY*KQYILFSKFSRCCIMKNGINF 314
           +  N + S   S+ +N   T+++   +    +V HY  K+ IL+++ S   I  NG+ F
Sbjct: 259 LTQNLYYSALSSHNLNYVNTEQFVKSQYQANNV-HYQGKENILWTQASAKGISDNGVLF 316


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +1

Query: 70  NLFFVNIILITFLREMNGLLHIYNVF---YAMEHIKSAIIATI 189
           N+F VN+ +  F   +   + IYN F   +A+ ++   I A I
Sbjct: 84  NMFVVNLAICDFFMMIKTPIFIYNSFNTGFALGNLGCQIFAVI 126


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 687 LINWKNVALKYINIFDMFTYYFNLHDL 767
           LI WKN  LKY N ++  +   N  D+
Sbjct: 262 LIKWKNWDLKY-NTWEPISNLINCSDI 287


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 454 YFVNESKTKKYFYYRRHL 401
           YF+ + +   Y+YY R +
Sbjct: 223 YFMEDVELNAYYYYMREM 240


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 454 YFVNESKTKKYFYYRRHL 401
           YF+ + +   Y+YY R +
Sbjct: 223 YFMEDVELNAYYYYMREM 240


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 669 LEQVAKLINWKNVALKYINIFD 734
           L+Q  + +NW+ +A KY+  ++
Sbjct: 100 LQQWNEDLNWQPIATKYLRRYE 121


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 669 LEQVAKLINWKNVALKYINIFD 734
           L+Q  + +NW+ +A KY+  ++
Sbjct: 115 LQQWNEDLNWQPIATKYLRRYE 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,183
Number of Sequences: 438
Number of extensions: 4369
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)