Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV41035
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF495759-1|AAM15968.1|  127|Homo sapiens unknown protein.              36   0.19 
AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homol...    31   4.1  

>AF495759-1|AAM15968.1|  127|Homo sapiens unknown protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.19
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = -3

Query: 383 GAGAAWSTSAGCTEAECSSLLRS----LPRSKGLFLSLPQRQTMVLLLTAR*VSCARGPR 216
           G     + S  C E +C+S  +S    + R+ GL+L L     + L  +      +  P 
Sbjct: 10  GGSCTCAGSCKCKECKCTSCKKSECGAISRNLGLWLRLGGNSRLALSASFWGTGLSL-PS 68

Query: 215 RPRSFPLYTSSPRRRWERRASKSADT 138
            P SFPL    P+ RW R A  S DT
Sbjct: 69  LPVSFPLQAFCPKFRWGRTAFFSWDT 94


>AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homolog
           variant protein.
          Length = 526

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -3

Query: 224 GPRRPRSFPLYTSSPRRRWERRASKSAD-TTHVF-EPIEDSASLTRVL 87
           GPRRPR  P  ++S RR   RRA  S +   + F E I++ A++TR+L
Sbjct: 57  GPRRPRPLPA-SASVRRAPARRAMDSDEGYNYEFNEVIQNPATITRIL 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,287,757
Number of Sequences: 237096
Number of extensions: 2057164
Number of successful extensions: 6385
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6385
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)