Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV41019
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 172 2e-45
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 24 1.4
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 3.3
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 3.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.4
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.4
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.4
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 22 4.4
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 7.6
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.6
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.6
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.6
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 172 bits (419), Expect = 2e-45
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +2
Query: 2 WHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSW 181
WHKRRATGGKR PIRKKRK+ELGRPAANT+LGPQRIH+VR+RGGN KYRALRLDTGNFSW
Sbjct: 8 WHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSW 67
Query: 182 GSECSTRKTRIIDVVYNASNNELV 253
GSEC+TRKTRIIDVVYNASNNELV
Sbjct: 68 GSECTTRKTRIIDVVYNASNNELV 91
Score = 142 bits (344), Expect = 3e-36
Identities = 65/84 (77%), Positives = 73/84 (86%)
Frame = +1
Query: 256 TKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLAR 435
TKTLVKNAIV +DATPFRQWYE HY LPLGRK+GAKLTEAEE ++NKKRS+K KY AR
Sbjct: 93 TKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAKYKAR 152
Query: 436 QRLAKVEGALEEQFHTGRLLACVA 507
QR AKVE ALEEQF TGR+LAC++
Sbjct: 153 QRFAKVEPALEEQFATGRVLACIS 176
Score = 64.5 bits (150), Expect = 8e-13
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +3
Query: 510 RPGQCGRADGYILEGKELEFYLRKIKSKRAK 602
RPGQCGR DGYILEGKELEFY+R+IKSK+AK
Sbjct: 178 RPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = -1
Query: 342 KRQRIMRLIPLPEWSCIYYNNCILDKGLCSTNSLLDALYTTSMIRVLRVEHSDPQEK 172
K Q + L+ LP W CIL T + +L + ++R + P E+
Sbjct: 18 KEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQISSLIIPGNVNMIRTHSTXPXEE 74
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 288 YNNCILDKGLCSTNS 244
Y NC+LD+G C+ ++
Sbjct: 46 YVNCLLDQGPCTPDA 60
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 288 YNNCILDKGLCSTNS 244
Y NC+LD+G C+ ++
Sbjct: 46 YVNCLLDQGPCTPDA 60
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNCILDKGLCSTNSL 241
L P P+WS Y++C G+ S + L
Sbjct: 104 LQPYPDWSFAKYDDC---SGIVSASKL 127
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNCILDKGLCSTNSL 241
L P P+WS Y++C G+ S + L
Sbjct: 104 LQPYPDWSFAKYDDC---SGIVSASKL 127
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNCILDKGLCSTNSL 241
L P P+WS Y++C G+ S + L
Sbjct: 104 LQPYPDWSFAKYDDC---SGIVSASKL 127
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 288 YNNCILDKGLCSTNSLLDALYT 223
Y I ++ CS NSL+ +YT
Sbjct: 36 YRCVICERVYCSRNSLMTHIYT 57
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNC 277
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNC 277
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNC 277
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 321 LIPLPEWSCIYYNNC 277
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,925
Number of Sequences: 438
Number of extensions: 3323
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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