Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV41015
(818 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein. 163 9e-40
M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase... 162 1e-39
BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase (ubi... 162 1e-39
BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase (ubi... 161 4e-39
BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase (ubi... 161 4e-39
D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex... 157 3e-38
BC067813-1|AAH67813.1| 248|Homo sapiens LAMC1 protein protein. 34 0.54
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 33 0.94
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 33 0.94
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 33 0.94
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 33 1.6
>CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein.
Length = 249
Score = 163 bits (395), Expect = 9e-40
Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 2/164 (1%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEILAGQSKESRGF 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+ K
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 VGHLP*RSQARCHDSLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 388
V + P +A +LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 389 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPVESF 520
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG ++P + F
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGESTPDKLF 169
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 169 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 228
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 229 GGLTSLTEPPKGPGFGVQAGL 249
>M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase
protein.
Length = 249
Score = 162 bits (394), Expect = 1e-39
Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEILAGQSKESRGF 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+ K
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 VGHLP*RSQARCHDSLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 388
V + P +A +LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 389 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPVESF 520
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P + F
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLF 169
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 169 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 228
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 229 GGLTSLTEPPKGPGFGVQAGL 249
>BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 162 bits (394), Expect = 1e-39
Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEILAGQSKESRGF 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+ K
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 VGHLP*RSQARCHDSLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 388
V + P +A +LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 389 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPVESF 520
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P + F
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLF 169
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 169 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 228
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 229 GGLTSLTEPPKGPGFGVQAGL 249
>BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 161 bits (390), Expect = 4e-39
Identities = 80/164 (48%), Positives = 107/164 (65%), Gaps = 2/164 (1%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEILAGQSKESRGF 208
L + G+ W +++ T + +LFVHRDTPE+NP PF+ K
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 VGHLP*RSQARCHDSLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 388
V + P +A +LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 389 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPVESF 520
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P + F
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLF 169
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 169 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 228
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 229 GGLTSLTEPPKGPGFGVQAGL 249
>BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 161 bits (390), Expect = 4e-39
Identities = 80/164 (48%), Positives = 107/164 (65%), Gaps = 2/164 (1%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEILAGQSKESRGF 208
L + G+ W +++ T + +LFVHRDTPE+NP PF+ K
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 VGHLP*RSQARCHDSLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 388
V + P +A +LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 389 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPVESF 520
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P + F
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLF 169
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 169 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 228
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 229 GGLTSLTEPPKGPGFGVQAGL 249
>D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex I
protein.
Length = 231
Score = 157 bits (382), Expect = 3e-38
Identities = 75/134 (55%), Positives = 97/134 (72%)
Frame = +2
Query: 119 SLFVHRDTPEDNPSIPFEILAGQSKESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWLPI 298
+LFVHRDTPE+NP PF+ K V + P +A +LDLAQRQ+G WLPI
Sbjct: 19 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 77
Query: 299 SAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 478
SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKY++QVCTTTPC LR SD+IL AI+++
Sbjct: 78 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYYIQVCTTTPCMLRNSDSILEAIQKK 137
Query: 479 TNCEVGGNSPVESF 520
+VG +P + F
Sbjct: 138 LGIKVGETTPDKLF 151
Score = 130 bits (313), Expect = 8e-30
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 517 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPL 696
F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK + PKPGPRSGRF+ EP
Sbjct: 151 FTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPA 210
Query: 697 GGLTSLTEEPTGPGFGVQDAL 759
GGLTSLTE P GPGFGVQ L
Sbjct: 211 GGLTSLTEPPKGPGFGVQAGL 231
>BC067813-1|AAH67813.1| 248|Homo sapiens LAMC1 protein protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.54
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 116 DSLFVHRDTPEDNPSIPFEILAGQ-----SKESRGFVGHLP*RSQARCHDSLLDLAQRQS 280
+S +++ T ED P IP++ +G SK +RGF+ QA C D D++ +
Sbjct: 158 ESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISP-LT 216
Query: 281 GGWLPISAMHKVAEILNLPKMRVYEV 358
GG + S + N V +V
Sbjct: 217 GGNVAFSTLEGRPSAYNFDNSPVLQV 242
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 33.5 bits (73), Expect = 0.94
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 116 DSLFVHRDTPEDNPSIPFEILAGQ-----SKESRGFVGHLP*RSQARCHDSLLDLAQRQS 280
+S +++ T ED P IP++ +G SK +RGF+ QA C D D++
Sbjct: 158 ESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTG 217
Query: 281 G 283
G
Sbjct: 218 G 218
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 33.5 bits (73), Expect = 0.94
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 116 DSLFVHRDTPEDNPSIPFEILAGQ-----SKESRGFVGHLP*RSQARCHDSLLDLAQRQS 280
+S +++ T ED P IP++ +G SK +RGF+ QA C D D++
Sbjct: 158 ESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTG 217
Query: 281 G 283
G
Sbjct: 218 G 218
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 33.5 bits (73), Expect = 0.94
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 116 DSLFVHRDTPEDNPSIPFEILAGQ-----SKESRGFVGHLP*RSQARCHDSLLDLAQRQS 280
+S +++ T ED P IP++ +G SK +RGF+ QA C D D++
Sbjct: 158 ESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTG 217
Query: 281 G 283
G
Sbjct: 218 G 218
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 116 DSLFVHRDTPEDNPSIPFEILAGQ-----SKESRGFVGHLP*RSQARCHDSLLDLAQRQS 280
+S +++ T ED P IP++ +G SK +RGF+ QA C D D +
Sbjct: 158 ESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDFSPLTG 217
Query: 281 G 283
G
Sbjct: 218 G 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,174,135
Number of Sequences: 237096
Number of extensions: 3031328
Number of successful extensions: 7100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7081
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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