Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV41014
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    30   4.1  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    30   4.1  
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    30   4.1  
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro...    30   4.1  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    30   4.1  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    30   4.1  

>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
            protein.
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267  NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
            N    +C +GY   +C IC A N F N DN
Sbjct: 956  NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 984


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
            D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267  NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
            N    +C +GY   +C IC A N F N DN
Sbjct: 956  NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 984


>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p
           protein.
          Length = 1296

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267 NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
           N    +C +GY   +C IC A N F N DN
Sbjct: 464 NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 492


>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
           protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267 NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
           N    +C +GY   +C IC A N F N DN
Sbjct: 194 NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 222


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
            isoform B protein.
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267  NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
            N    +C +GY   +C IC A N F N DN
Sbjct: 956  NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 984


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
            isoform A protein.
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 267  NKKWFYCHKGYHARKCTICKAINIFRNSDN 356
            N    +C +GY   +C IC A N F N DN
Sbjct: 956  NNMLCHCQEGYSGSRCEIC-ADNFFGNPDN 984


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,517,139
Number of Sequences: 53049
Number of extensions: 555697
Number of successful extensions: 1043
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)