Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV41010
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   6.6  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   6.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   8.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   8.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 45  LKQVGCTHVLATTATGSLV 101
           LKQV   H +ATT  G LV
Sbjct: 170 LKQVEIPHDVATTGKGELV 188


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 272 WPRCTVGARPPTI 234
           W RC +G  PP +
Sbjct: 623 WERCNLGLEPPRV 635


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 272 WPRCTVGARPPTI 234
           W RC +G  PP +
Sbjct: 623 WERCNLGLEPPRV 635


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 272 WPRCTVGARPPTI 234
           W RC +G  PP +
Sbjct: 623 WERCNLGLEPPRV 635


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 555 DNIRSLLDVLRECCQNSLTETD 490
           D+I+ +  +  EC +N+  ETD
Sbjct: 103 DDIQLVKGIANECIENAKGETD 124


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 555 DNIRSLLDVLRECCQNSLTETD 490
           D+I+ +  +  EC +N+  ETD
Sbjct: 103 DDIQLVKGIANECIENAKGETD 124


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 259 QWARALQQYAG 227
           +W++ +QQYAG
Sbjct: 105 EWSKIVQQYAG 115


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 111 CILQLETRWRSWRVRECSRLASVPKY*LDSSHR 13
           C+LQ    W     ++CS + S  K  +D   R
Sbjct: 106 CLLQPYPDWSWANYKDCSGIVSAYKIAIDKFDR 138


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 99  VEEYRPGDLVILDD 140
           +EEY PG+ VI+ D
Sbjct: 416 IEEYLPGNGVIIPD 429


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 259 QWARALQQYAG 227
           +W++ +QQYAG
Sbjct: 105 EWSKIVQQYAG 115


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 213  HLPMQPAYCWRARAHCTARPSLGGTRAMKPA 305
            + P QPA   + +A   A+P        KPA
Sbjct: 997  YTPPQPANAQQGQAQAQAKPQSQEANKPKPA 1027


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,787
Number of Sequences: 438
Number of extensions: 4845
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)