Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV41008
(685 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 168 5e-42
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 168 5e-42
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 168 5e-42
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 168 5e-42
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 140 2e-33
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 140 2e-33
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 140 2e-33
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 168 bits (409), Expect = 5e-42
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 6 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 185
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 12 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 71
Query: 186 DRPGSKINKKEIVEAVTIIETPPWFV 263
DRPGSKINKKE+VEAVT++ETPP V
Sbjct: 72 DRPGSKINKKEVVEAVTVLETPPMIV 97
Score = 126 bits (303), Expect = 4e-29
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGR 433
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+
Sbjct: 95 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGK 154
Query: 434 KSIEKDFKKMIRYCSVVRVIAHTQM 508
KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 155 KSIENDFRKMLRYCKVIRVIAHSQI 179
Score = 116 bits (278), Expect = 4e-26
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Frame = +1
Query: 427 WTQINRKRFQEDD--PLL*CCK--SHCPHSN-ELLKQRQKKAHIMEIQLNGGTIEDKVKW 591
WT K+ E+D +L CK HS L+KQRQKKAH+MEIQLNGG+IEDKVKW
Sbjct: 148 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKW 207
Query: 592 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKG 684
AREHLEKPI V +VF QDEMIDC+GVTKGKG
Sbjct: 208 AREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 238
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 168 bits (409), Expect = 5e-42
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 6 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 185
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 186 DRPGSKINKKEIVEAVTIIETPPWFV 263
DRPGSKINKKE+VEAVT++ETPP V
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIV 86
Score = 126 bits (303), Expect = 4e-29
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGR 433
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+
Sbjct: 84 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGK 143
Query: 434 KSIEKDFKKMIRYCSVVRVIAHTQM 508
KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 144 KSIENDFRKMLRYCKVIRVIAHSQI 168
Score = 116 bits (278), Expect = 4e-26
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Frame = +1
Query: 427 WTQINRKRFQEDD--PLL*CCK--SHCPHSN-ELLKQRQKKAHIMEIQLNGGTIEDKVKW 591
WT K+ E+D +L CK HS L+KQRQKKAH+MEIQLNGG+IEDKVKW
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKW 196
Query: 592 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKG 684
AREHLEKPI V +VF QDEMIDC+GVTKGKG
Sbjct: 197 AREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 227
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 168 bits (409), Expect = 5e-42
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 6 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 185
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 186 DRPGSKINKKEIVEAVTIIETPPWFV 263
DRPGSKINKKE+VEAVT++ETPP V
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIV 86
Score = 77.4 bits (182), Expect = 2e-14
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 373
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 84 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 168 bits (409), Expect = 5e-42
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 6 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 185
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 186 DRPGSKINKKEIVEAVTIIETPPWFV 263
DRPGSKINKKE+VEAVT++ETPP V
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIV 86
Score = 126 bits (303), Expect = 4e-29
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGR 433
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+
Sbjct: 84 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGK 143
Query: 434 KSIEKDFKKMIRYCSVVRVIAHTQM 508
KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 144 KSIENDFRKMLRYCKVIRVIAHSQI 168
Score = 116 bits (278), Expect = 4e-26
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Frame = +1
Query: 427 WTQINRKRFQEDD--PLL*CCK--SHCPHSN-ELLKQRQKKAHIMEIQLNGGTIEDKVKW 591
WT K+ E+D +L CK HS L+KQRQKKAH+MEIQLNGG+IEDKVKW
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKW 196
Query: 592 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKG 684
AREHLEKPI V +VF QDEMIDC+GVTKGKG
Sbjct: 197 AREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 227
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 140 bits (338), Expect = 2e-33
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +3
Query: 45 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 224
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 225 EAVTIIETPPWFV 263
EAVT++ETPP V
Sbjct: 61 EAVTVLETPPMIV 73
Score = 70.1 bits (164), Expect = 3e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 367
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 71 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 140 bits (338), Expect = 2e-33
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +3
Query: 45 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 224
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 225 EAVTIIETPPWFV 263
EAVT++ETPP V
Sbjct: 61 EAVTVLETPPMIV 73
Score = 126 bits (303), Expect = 4e-29
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGR 433
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+
Sbjct: 71 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGK 130
Query: 434 KSIEKDFKKMIRYCSVVRVIAHTQM 508
KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 131 KSIENDFRKMLRYCKVIRVIAHSQI 155
Score = 116 bits (278), Expect = 4e-26
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Frame = +1
Query: 427 WTQINRKRFQEDD--PLL*CCK--SHCPHSN-ELLKQRQKKAHIMEIQLNGGTIEDKVKW 591
WT K+ E+D +L CK HS L+KQRQKKAH+MEIQLNGG+IEDKVKW
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKW 183
Query: 592 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKG 684
AREHLEKPI V +VF QDEMIDC+GVTKGKG
Sbjct: 184 AREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 214
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 140 bits (338), Expect = 2e-33
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +3
Query: 45 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 224
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 225 EAVTIIETPPWFV 263
EAVT++ETPP V
Sbjct: 61 EAVTVLETPPMIV 73
Score = 126 bits (303), Expect = 4e-29
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 VVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGR 433
++ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY W D+LG+
Sbjct: 71 MIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGK 130
Query: 434 KSIEKDFKKMIRYCSVVRVIAHTQM 508
KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 131 KSIENDFRKMLRYCKVIRVIAHSQI 155
Score = 116 bits (278), Expect = 4e-26
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Frame = +1
Query: 427 WTQINRKRFQEDD--PLL*CCK--SHCPHSN-ELLKQRQKKAHIMEIQLNGGTIEDKVKW 591
WT K+ E+D +L CK HS L+KQRQKKAH+MEIQLNGG+IEDKVKW
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKW 183
Query: 592 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKG 684
AREHLEKPI V +VF QDEMIDC+GVTKGKG
Sbjct: 184 AREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,154,740
Number of Sequences: 53049
Number of extensions: 714819
Number of successful extensions: 1551
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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