Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40997
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 50 7e-06
BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 50 7e-06
AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 50 7e-06
U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 41 0.006
BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. 40 0.014
U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 39 0.018
BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 39 0.018
BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 39 0.018
AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 39 0.018
AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 39 0.018
AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein. 39 0.024
>U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 435
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV*AYKDLGL 278
+KL P L+ L+G R +++ +W IK L DP+ + FVICDK + ++ + +
Sbjct: 256 FKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFETQRMKF 315
Query: 279 SE 284
SE
Sbjct: 316 SE 317
>BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 476
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV*AYKDLGL 278
+KL P L+ L+G R +++ +W IK L DP+ + FVICDK + ++ + +
Sbjct: 256 FKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKF 315
Query: 279 SE 284
SE
Sbjct: 316 SE 317
>AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related,
matrix-associated, actin-dependent regulator of
chromatin D1 protein.
Length = 453
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV*AYKDLGL 278
+KL P L+ L+G R +++ +W IK L DP+ + FVICDK + ++ + +
Sbjct: 233 FKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKF 292
Query: 279 SE 284
SE
Sbjct: 293 SE 294
>U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 475
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV*AYKDLGL 278
YKL P L+ L+G R +++ +W IK L D + + ++ C++ ++ + L
Sbjct: 255 YKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRF 314
Query: 279 SE 284
SE
Sbjct: 315 SE 316
>BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein.
Length = 531
Score = 39.5 bits (88), Expect = 0.014
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
YKL P L+ L+G R + + +W IK L D + + ++ C++ ++
Sbjct: 311 YKLDPRLARLLGVHTQTRAAITQALWLYIKHNQLQDGHEREYINCNRYFRQI 362
>U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 469
Score = 39.1 bits (87), Expect = 0.018
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK ++
Sbjct: 249 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI 300
>BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 39.1 bits (87), Expect = 0.018
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK ++
Sbjct: 250 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI 301
>BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 39.1 bits (87), Expect = 0.018
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK ++
Sbjct: 250 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI 301
>AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 1 protein.
Length = 470
Score = 39.1 bits (87), Expect = 0.018
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK ++
Sbjct: 250 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI 301
>AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 2 protein.
Length = 483
Score = 39.1 bits (87), Expect = 0.018
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDKDMHKV 254
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK ++
Sbjct: 263 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI 314
>AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein.
Length = 300
Score = 38.7 bits (86), Expect = 0.024
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 99 YKLSPALSELMGAEEMPRHEVVKRMWALIKERNLYDPNNKRFVICDK 239
+KL P L+ L+G R +V+ +W +K L D ++K ++ DK
Sbjct: 250 FKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDK 296
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,654,935
Number of Sequences: 237096
Number of extensions: 2196207
Number of successful extensions: 4259
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4259
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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