Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40991
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.22 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 281 LISGKYVLTAGHCVKGAILDVGTPK-TVRLGEYN 379
           +IS +YVLTA HC    I+D  T K  + +GE++
Sbjct: 192 IISKRYVLTAAHC----IIDENTTKLAIVVGEHD 221



 Score = 26.2 bits (55), Expect = 0.38
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 714 TTRRLRTKPETIAQWPRITLWKGQMCAGGEAGKDSCKGDSGG 839
           TT  + T+ E    +  I +    MCA  + GKD+C+ DSGG
Sbjct: 313 TTLNMLTQVECYKYYGNIMV--NAMCAYAK-GKDACQMDSGG 351


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +1

Query: 19  GSEQQSICCVTAPQSTAVTTTPRPKRVHACQSEMTATPP 135
           G+   +I  +T   +T  TTT      +  Q+    TPP
Sbjct: 652 GAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPP 690


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +1

Query: 613 KFALTVAGWGRYLQFDNGTVRSSKIKLHVTLPFVQRDVCEQNQKPLRNGQE*HCG-RDKC 789
           +F     GW +++    G      ++L V +   + D  EQN+         +CG RD+ 
Sbjct: 575 RFDFCGCGWPQHMLIPKGNKEGFAMELFVMVSDYKDDRVEQNEPIGCKDASSYCGLRDRK 634

Query: 790 VP 795
            P
Sbjct: 635 YP 636


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 25  EQQSICCVTAPQSTAVTTTPRPKRVHACQSEMTATPPNP 141
           ++Q I    + Q ++    P+P    + Q+    +PPNP
Sbjct: 4   QKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNP 42


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 70  VTTTPRPKRVHACQSEM 120
           V +T RP R ++C+S+M
Sbjct: 398 VGSTRRPSRRNSCESQM 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,379
Number of Sequences: 438
Number of extensions: 6092
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)