Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40989
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)... 32 2.9
Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)... 32 2.9
Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)... 32 2.9
Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)... 32 2.9
DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding p... 32 2.9
BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein. 32 2.9
BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisia... 32 2.9
AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC... 32 2.9
AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b var... 32 2.9
AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens ... 32 2.9
AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein. 32 2.9
AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein. 32 2.9
AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding p... 32 2.9
L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 30 8.8
CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 30 8.8
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 8.8
BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 30 8.8
BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 30 8.8
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.8
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 8.8
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 8.8
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.8
>Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 371
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 272
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 197 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 251
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 252 RSRSHSRGHRRASR 265
>Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 170
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 49 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 103
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 104 RSRSHSRGHRRASR 117
>DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding
protein Luc7-like 1 protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein.
Length = 354
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 233 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 287
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 288 RSRSHSRGHRRASR 301
>BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC7B1
protein.
Length = 371
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b
variant protein.
Length = 371
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ10231 fis, clone HEMBB1000226, weakly similar to
PUTATIVE PRE-MRNA SPLICING FACTOR ATP-DEPENDENT RNA
HELICASE ).
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein.
Length = 371
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding
protein protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.9
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +1
Query: 463 RHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRS 642
R R L RR RT R R + +R R STS + R S S + RH +HRS
Sbjct: 250 REREERLSRRSGSRT--RDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRD---RHRRHRS 304
Query: 643 PSSSNPSLARRARR 684
S S+ RRA R
Sbjct: 305 RSRSHSRGHRRASR 318
>L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha
protein.
Length = 598
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 248 PSE*GNSLQNLYTPRHDVCKRSVRSLSPHPLEIPSGYS 361
PS+ G+ + + TP + KRSV + SPH L PS +S
Sbjct: 116 PSK-GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein.
Length = 598
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 248 PSE*GNSLQNLYTPRHDVCKRSVRSLSPHPLEIPSGYS 361
PS+ G+ + + TP + KRSV + SPH L PS +S
Sbjct: 116 PSK-GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 681 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 740
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 741 SRSNSSPEMKK 751
>BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 248 PSE*GNSLQNLYTPRHDVCKRSVRSLSPHPLEIPSGYS 361
PS+ G+ + + TP + KRSV + SPH L PS +S
Sbjct: 116 PSK-GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 248 PSE*GNSLQNLYTPRHDVCKRSVRSLSPHPLEIPSGYS 361
PS+ G+ + + TP + KRSV + SPH L PS +S
Sbjct: 116 PSK-GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 681 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 740
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 741 SRSNSSPEMKK 751
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 681 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 740
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 741 SRSNSSPEMKK 751
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 646 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 705
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 706 SRSNSSPEMKK 716
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 471 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 530
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 531 SRSNSSPEMKK 541
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 460 SRHRYAILRRRHDMRTPHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHR 639
SR R R R RTP R R + + R T + GSS R + R
Sbjct: 729 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 788
Query: 640 SPSSSNPSLAR 672
S S+S+P + +
Sbjct: 789 SRSNSSPEMKK 799
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,675,974
Number of Sequences: 237096
Number of extensions: 2930286
Number of successful extensions: 10622
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10586
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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