Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40972
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 103 6e-22
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 103 6e-22
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 103 6e-22
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 103 6e-22
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 103 6e-22
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 100 6e-21
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 50 8e-06
M83254-1|AAA60146.1| 585|Homo sapiens potassium channel protein. 30 6.8
M60451-1|AAA61276.1| 611|Homo sapiens voltage-gated potassium c... 30 6.8
M55513-1|AAA36422.1| 613|Homo sapiens potassium channel protein... 30 6.8
BC099666-1|AAH99666.3| 613|Homo sapiens potassium voltage-gated... 30 6.8
BC099665-1|AAH99665.3| 613|Homo sapiens potassium voltage-gated... 30 6.8
BC096358-1|AAH96358.3| 613|Homo sapiens potassium voltage-gated... 30 6.8
BC096357-1|AAH96357.1| 613|Homo sapiens potassium voltage-gated... 30 6.8
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (247), Expect = 6e-22
Identities = 46/77 (59%), Positives = 53/77 (68%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 100 bits (239), Expect = 6e-21
Identities = 45/77 (58%), Positives = 52/77 (67%)
Frame = +3
Query: 24 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 203
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 204 YHTKVRAGRGFTLREIR 254
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 100 bits (239), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 453
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 454 RGPLMPVQQPAPKSVARPTLKMKRTSK 534
GP+MPV+ K AR + ++ K
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 635
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 50.0 bits (114), Expect = 8e-06
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3
Query: 501 KTYTEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 614
+ TE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 24 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 436 KLATQLRGPLMPVQQPAPKSVARPTLKMKRTSK 534
KLATQL GP+MPV+ K AR + ++ K
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 34
>M83254-1|AAA60146.1| 585|Homo sapiens potassium channel protein.
Length = 585
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
>M60451-1|AAA61276.1| 611|Homo sapiens voltage-gated potassium
channel protein.
Length = 611
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 471 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 530
Query: 163 A 161
A
Sbjct: 531 A 531
>M55513-1|AAA36422.1| 613|Homo sapiens potassium channel protein
protein.
Length = 613
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
>BC099666-1|AAH99666.3| 613|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, member 5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
>BC099665-1|AAH99665.3| 613|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, member 5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
>BC096358-1|AAH96358.3| 613|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, member 5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
>BC096357-1|AAH96357.1| 613|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, member 5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 340 FAMIQQTCCVYGDLQQFQSFGQILGSICGLISRRVNPLPARTLVW-YRTVGHRTIGRNGP 164
+A++ T YGD++ G+I+GS+C + LP +V + HR P
Sbjct: 473 WAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEP 532
Query: 163 A 161
A
Sbjct: 533 A 533
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,011,171
Number of Sequences: 237096
Number of extensions: 2006601
Number of successful extensions: 4056
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4026
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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