Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40971
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0592 + 22585546-22588573,22588680-22589032                       30   2.4  
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580...    29   5.6  

>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 530 VFPCVLNIITLLGLVYLPNKLRLFGTIPGTSGMDREVEDENVQILRQMGNFQTQ 691
           + PC+ N+ +L+ L    N L   G+IP   G+ R++ + N+ +    GN  +Q
Sbjct: 91  ISPCIANLTSLMTLQLSNNSLH--GSIPPKLGLLRKLRNLNLSMNSLEGNIPSQ 142


>07_03_0033 +
           12656255-12656297,12657402-12657408,12657484-12658016,
           12658106-12658224,12658329-12658688,12659602-12659784
          Length = 414

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 613 GYSSEQSQLVRQVHETQKCDNVQNARKHHIE 521
           GY++E   L ++ H   K  N QN RK H+E
Sbjct: 306 GYTAETPVLAQRDHLENKPGNQQNVRKGHME 336


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,685,647
Number of Sequences: 37544
Number of extensions: 371230
Number of successful extensions: 800
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)