Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40968
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.1  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   5.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   5.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.4  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   7.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 123 GCPENAHWTDDPCVR 167
           G  +  H+  DPCVR
Sbjct: 708 GALDRLHYETDPCVR 722


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = +3

Query: 204 VGALIQTCHCNDGLVFNRTENVCPFLI 284
           +G   +TC+      F + + +CP+ +
Sbjct: 433 IGCECKTCNSKTKCCFAQDDGLCPYTL 459


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 263 KCVPISDC*NVITIYNL 313
           KC+P S   N   IYNL
Sbjct: 113 KCLPTSGSDNCNKIYNL 129


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 263 KCVPISDC*NVITIYNL 313
           KC+P S   N   IYNL
Sbjct: 113 KCLPTSGSDNCNKIYNL 129


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 140 GIFRASIFGSAGLESHHGDNQEHD 69
           G FR SI  +A  +  +G+N E D
Sbjct: 209 GFFRRSITKNAVYQCKYGNNCEID 232


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 140 GIFRASIFGSAGLESHHGDNQEHD 69
           G FR SI  +A  +  +G+N E D
Sbjct: 6   GFFRRSITKNAVYQCKYGNNCEID 29


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 111 CWPREPSRR 85
           CW  EPS+R
Sbjct: 838 CWSGEPSKR 846


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 111 CWPREPSRR 85
           CW  EPS+R
Sbjct: 876 CWSGEPSKR 884


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,886
Number of Sequences: 438
Number of extensions: 1582
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)