Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40967
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    25   0.77 
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    24   1.3  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   1.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   1.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.4  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 399 RRSIQSPKIW*IKKKSLETHGHQ 467
           R+S++  ++W  K K+ E HG++
Sbjct: 190 RQSVEKSELWVYKSKASEEHGNK 212


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 399 RRSIQSPKIW*IKKKSLETHG 461
           R+S++  ++W  K K+ E HG
Sbjct: 158 RQSVEKSELWVYKSKASEEHG 178


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 164 FNKERRNEKIQMKKKIKAHEEKNVKQNT 247
           + K+RR EK+  +K+    E  N K+N+
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNS 39


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 164 FNKERRNEKIQMKKKIKAHEEKNVKQNT 247
           + K+RR EK+  +K+    E  N K+N+
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNS 39


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = +1

Query: 199 EKENQSARREECQTEHREGAEGALPVYLLDRDVQSRAKVLSN 324
           +KEN        +    +      P Y+  R+  S++ ++SN
Sbjct: 312 DKENHKTEEPNDEVATYDNTPRDFPYYMYSREQYSQSHLISN 353


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 583 VAFSSGCVTWAFLNLSAIGL 524
           +AF   C T + LNL AI L
Sbjct: 102 IAFDVMCSTASILNLCAISL 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,625
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)