Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40964
         (860 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109023-1|AAI09024.1|  990|Homo sapiens laeverin protein.             33   1.8  
BC109022-1|AAI09023.1|  990|Homo sapiens laeverin protein.             33   1.8  
BC068560-1|AAH68560.1|  701|Homo sapiens FLJ90650 protein protein.     33   1.8  
BC060869-1|AAH60869.1|  979|Homo sapiens FLJ90650 protein protein.     33   1.8  
AY560010-1|AAS66719.1|  990|Homo sapiens laeverin protein.             33   1.8  
BX538052-1|CAD97990.1|  193|Homo sapiens hypothetical protein pr...    30   9.4  

>BC109023-1|AAI09024.1|  990|Homo sapiens laeverin protein.
          Length = 990

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 530 LQMTHNITMSHHPSYTARRRVPAFDDS 610
           L+ T NITM HHPSY A   +P    S
Sbjct: 256 LKATFNITMIHHPSYVALSNMPKLGQS 282


>BC109022-1|AAI09023.1|  990|Homo sapiens laeverin protein.
          Length = 990

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 530 LQMTHNITMSHHPSYTARRRVPAFDDS 610
           L+ T NITM HHPSY A   +P    S
Sbjct: 256 LKATFNITMIHHPSYVALSNMPKLGQS 282


>BC068560-1|AAH68560.1|  701|Homo sapiens FLJ90650 protein protein.
          Length = 701

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 530 LQMTHNITMSHHPSYTARRRVPAFDDS 610
           L+ T NITM HHPSY A   +P    S
Sbjct: 256 LKATFNITMIHHPSYVALSNMPKLGQS 282


>BC060869-1|AAH60869.1|  979|Homo sapiens FLJ90650 protein protein.
          Length = 979

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 530 LQMTHNITMSHHPSYTARRRVPAFDDS 610
           L+ T NITM HHPSY A   +P    S
Sbjct: 245 LKATFNITMIHHPSYVALSNMPKLGQS 271


>AY560010-1|AAS66719.1|  990|Homo sapiens laeverin protein.
          Length = 990

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 530 LQMTHNITMSHHPSYTARRRVPAFDDS 610
           L+ T NITM HHPSY A   +P    S
Sbjct: 256 LKATFNITMIHHPSYVALSNMPKLGQS 282


>BX538052-1|CAD97990.1|  193|Homo sapiens hypothetical protein
           protein.
          Length = 193

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 718 MCVLFVLYKLM*-ARYNYSVSVLLGSLNVCFLLLSLPLWITAF 843
           +CVLFV + L+   RY YSV  ++G        LS  LW+  +
Sbjct: 75  VCVLFVFWNLLDMVRYTYSVLSVIGISYAVLTWLSQTLWMPIY 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,421,934
Number of Sequences: 237096
Number of extensions: 2349820
Number of successful extensions: 4132
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4132
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)