Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40959
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 406 NGISVMPT--GILPGRASSTVTFIKFIGLMLFEKASNMPTFL 287
           N + V+ T  G++   AS   ++++  G ML+   S++ TFL
Sbjct: 271 NTVYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPESDLVTFL 312


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 406 NGISVMPT--GILPGRASSTVTFIKFIGLMLFEKASNMPTFL 287
           N + V+ T  G++   AS   ++++  G ML+   S++ TFL
Sbjct: 271 NTVYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPESDLVTFL 312


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 234 SHIATALHHHHA 199
           SHI    HHHH+
Sbjct: 424 SHIHATPHHHHS 435


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 267 VNLQLSTKNVGIFEAFSNSIKPINLINVTVELALPGKIPVGITEIPF 407
           VN+ +   NV +  A  ++ K  N+ N+ +       + VG+  +PF
Sbjct: 75  VNVMVVLGNVLVILAVYHTSKLRNVTNMFIVSLAVADLMVGLAVLPF 121


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 68  YFINYVEIKTYYVY 109
           YF+  VE+  YY Y
Sbjct: 223 YFMEDVELNAYYYY 236


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 68  YFINYVEIKTYYVY 109
           YF+  VE+  YY Y
Sbjct: 223 YFMEDVELNAYYYY 236


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 200 AWWWWRAVA 226
           AWW+W A +
Sbjct: 28  AWWFWTATS 36


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 431 LTGPQWHLKWNLCDAYRDL 375
           LTG  W L   LCD++  L
Sbjct: 99  LTGGTWELGPMLCDSWVSL 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,986
Number of Sequences: 438
Number of extensions: 3214
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)