Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40952
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222900-1|BAD96620.1| 420|Homo sapiens RNA methyltransferase l... 103 4e-22
BC011550-1|AAH11550.1| 420|Homo sapiens RNA methyltransferase l... 103 6e-22
AK001443-1|BAA91694.1| 420|Homo sapiens protein ( Homo sapiens ... 103 6e-22
AF177344-1|AAG17988.2| 420|Homo sapiens unknown protein. 103 6e-22
BC050614-1|AAH50614.1| 420|Homo sapiens RNA methyltransferase l... 102 8e-22
BC015612-1|AAH15612.1| 459|Homo sapiens ring finger protein 25 ... 38 0.027
AK222525-1|BAD96245.1| 459|Homo sapiens ring finger protein 25 ... 38 0.027
AK023968-1|BAB14743.1| 439|Homo sapiens protein ( Homo sapiens ... 38 0.027
BC072411-1|AAH72411.1| 353|Homo sapiens mitochondrial rRNA meth... 35 0.25
CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein. 33 1.0
BC035750-1|AAH35750.1| 337|Homo sapiens cysteinyl leukotriene r... 32 1.8
AY242130-1|AAO92297.1| 337|Homo sapiens cysteinyl leukotriene r... 32 1.8
AL445202-1|CAI40462.1| 337|Homo sapiens cysteinyl leukotriene r... 32 1.8
AF133266-1|AAD42778.1| 337|Homo sapiens cysteinyl leukotriene r... 32 1.8
AF119711-1|AAD42285.1| 337|Homo sapiens cysLT1 LTD4 receptor pr... 32 1.8
BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase (ubi... 31 2.3
BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase (ubi... 31 2.3
AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase (ubi... 31 2.3
AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase (ubi... 31 2.3
AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone oxidore... 31 2.3
AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone oxidore... 31 2.3
L31573-1|AAA74886.1| 488|Homo sapiens sulfite oxidase protein. 31 3.1
BC065193-1|AAH65193.2| 545|Homo sapiens sulfite oxidase protein. 31 3.1
AY056018-1|AAL08048.1| 488|Homo sapiens sulfite oxidase protein. 31 3.1
>AK222900-1|BAD96620.1| 420|Homo sapiens RNA methyltransferase like
1 variant protein.
Length = 420
Score = 103 bits (248), Expect = 4e-22
Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = -3
Query: 507 TSPGIFGIFETPTPGNIK----KKSNTIPLNFICDNIRVPGNLGAILRAAMGVGCEKVLL 340
T GI GIF P + + +++PL ICDN+R PGNLG ILR+A G GC KVLL
Sbjct: 181 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 240
Query: 339 TKGCVDLWDPKVIRSAAGAHFRVPI 265
TKGCVD+W+PKV+R+ GAHFR+PI
Sbjct: 241 TKGCVDVWEPKVLRAGMGAHFRMPI 265
>BC011550-1|AAH11550.1| 420|Homo sapiens RNA methyltransferase like
1 protein.
Length = 420
Score = 103 bits (246), Expect = 6e-22
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = -3
Query: 507 TSPGIFGIFETPTPGNIK----KKSNTIPLNFICDNIRVPGNLGAILRAAMGVGCEKVLL 340
T GI GIF P + + +++PL ICDN+R PGNLG ILR+A G GC KVLL
Sbjct: 181 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 240
Query: 339 TKGCVDLWDPKVIRSAAGAHFRVPI 265
TKGCVD W+PKV+R+ GAHFR+PI
Sbjct: 241 TKGCVDAWEPKVLRAGMGAHFRMPI 265
>AK001443-1|BAA91694.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10581 fis, clone NT2RP2003543, weakly similar to
HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE SLR1673 (EC
2.1.1.-). ).
Length = 420
Score = 103 bits (246), Expect = 6e-22
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = -3
Query: 507 TSPGIFGIFETPTPGNIK----KKSNTIPLNFICDNIRVPGNLGAILRAAMGVGCEKVLL 340
T GI GIF P + + +++PL ICDN+R PGNLG ILR+A G GC KVLL
Sbjct: 181 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 240
Query: 339 TKGCVDLWDPKVIRSAAGAHFRVPI 265
TKGCVD W+PKV+R+ GAHFR+PI
Sbjct: 241 TKGCVDAWEPKVLRAGMGAHFRMPI 265
>AF177344-1|AAG17988.2| 420|Homo sapiens unknown protein.
Length = 420
Score = 103 bits (246), Expect = 6e-22
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = -3
Query: 507 TSPGIFGIFETPTPGNIK----KKSNTIPLNFICDNIRVPGNLGAILRAAMGVGCEKVLL 340
T GI GIF P + + +++PL ICDN+R PGNLG ILR+A G GC KVLL
Sbjct: 181 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 240
Query: 339 TKGCVDLWDPKVIRSAAGAHFRVPI 265
TKGCVD W+PKV+R+ GAHFR+PI
Sbjct: 241 TKGCVDAWEPKVLRAGMGAHFRMPI 265
>BC050614-1|AAH50614.1| 420|Homo sapiens RNA methyltransferase like
1 protein.
Length = 420
Score = 102 bits (245), Expect = 8e-22
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = -3
Query: 507 TSPGIFGIFETPTPGNIK----KKSNTIPLNFICDNIRVPGNLGAILRAAMGVGCEKVLL 340
T G+ GIF P + + +++PL ICDN+R PGNLG ILR+A G GC KVLL
Sbjct: 181 TPQGVMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 240
Query: 339 TKGCVDLWDPKVIRSAAGAHFRVPI 265
TKGCVD W+PKV+R+ GAHFR+PI
Sbjct: 241 TKGCVDAWEPKVLRAGMGAHFRMPI 265
>BC015612-1|AAH15612.1| 459|Homo sapiens ring finger protein 25
protein.
Length = 459
Score = 37.9 bits (84), Expect = 0.027
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 305 TFGSHKSTQPLVSSTFSHPTPIAARNIAPKLPGTR 409
T + ST P V ST P P+A ++I K+PGTR
Sbjct: 289 TLAAELSTSPAVQSTLPPPLPVATQHICEKIPGTR 323
>AK222525-1|BAD96245.1| 459|Homo sapiens ring finger protein 25
variant protein.
Length = 459
Score = 37.9 bits (84), Expect = 0.027
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 305 TFGSHKSTQPLVSSTFSHPTPIAARNIAPKLPGTR 409
T + ST P V ST P P+A ++I K+PGTR
Sbjct: 289 TLAAELSTSPAVQSTLPPPLPVATQHICEKIPGTR 323
>AK023968-1|BAB14743.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ13906 fis, clone Y79AA1000013, moderately
similar to Mus musculus RING finger protein AO7 mRNA. ).
Length = 439
Score = 37.9 bits (84), Expect = 0.027
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 305 TFGSHKSTQPLVSSTFSHPTPIAARNIAPKLPGTR 409
T + ST P V ST P P+A ++I K+PGTR
Sbjct: 289 TLAAELSTSPAVQSTLPPPLPVATQHICEKIPGTR 323
>BC072411-1|AAH72411.1| 353|Homo sapiens mitochondrial rRNA
methyltransferase 1 homolog (S. cerevisiae) protein.
Length = 353
Score = 34.7 bits (76), Expect = 0.25
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = -3
Query: 423 ICDNIRVPGNLGAILRAAMGVGCEKVLLTKGCVDLWDPKVIRSAAGA 283
+ D I+ P N GA+LR+A +G +KV+ ++ P V +S+AGA
Sbjct: 149 VLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGA 195
>CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein.
Length = 186
Score = 32.7 bits (71), Expect = 1.0
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P++P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRIPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>BC035750-1|AAH35750.1| 337|Homo sapiens cysteinyl leukotriene
receptor 1 protein.
Length = 337
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 330 CVDLWDPKVIRSAAGAHFRVPIYPSKNGMKCLNIQDQNQRFS*LTVIQRIQLKIAMILWL 151
CV +W ++ S+ + P KN KC NQ + + V+ + L + I+
Sbjct: 144 CVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPF 202
Query: 150 QLYLFCHTMV 121
+ + C+TM+
Sbjct: 203 VIIIVCYTMI 212
>AY242130-1|AAO92297.1| 337|Homo sapiens cysteinyl leukotriene
receptor 1 protein.
Length = 337
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 330 CVDLWDPKVIRSAAGAHFRVPIYPSKNGMKCLNIQDQNQRFS*LTVIQRIQLKIAMILWL 151
CV +W ++ S+ + P KN KC NQ + + V+ + L + I+
Sbjct: 144 CVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPF 202
Query: 150 QLYLFCHTMV 121
+ + C+TM+
Sbjct: 203 VIIIVCYTMI 212
>AL445202-1|CAI40462.1| 337|Homo sapiens cysteinyl leukotriene
receptor 1 protein.
Length = 337
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 330 CVDLWDPKVIRSAAGAHFRVPIYPSKNGMKCLNIQDQNQRFS*LTVIQRIQLKIAMILWL 151
CV +W ++ S+ + P KN KC NQ + + V+ + L + I+
Sbjct: 144 CVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPF 202
Query: 150 QLYLFCHTMV 121
+ + C+TM+
Sbjct: 203 VIIIVCYTMI 212
>AF133266-1|AAD42778.1| 337|Homo sapiens cysteinyl leukotriene
receptor protein.
Length = 337
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 330 CVDLWDPKVIRSAAGAHFRVPIYPSKNGMKCLNIQDQNQRFS*LTVIQRIQLKIAMILWL 151
CV +W ++ S+ + P KN KC NQ + + V+ + L + I+
Sbjct: 144 CVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPF 202
Query: 150 QLYLFCHTMV 121
+ + C+TM+
Sbjct: 203 VIIIVCYTMI 212
>AF119711-1|AAD42285.1| 337|Homo sapiens cysLT1 LTD4 receptor
protein.
Length = 337
Score = 31.9 bits (69), Expect = 1.8
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 330 CVDLWDPKVIRSAAGAHFRVPIYPSKNGMKCLNIQDQNQRFS*LTVIQRIQLKIAMILWL 151
CV +W ++ S+ + P KN KC NQ + + V+ + L + I+
Sbjct: 144 CVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPF 202
Query: 150 QLYLFCHTMV 121
+ + C+TM+
Sbjct: 203 VIIIVCYTMI 212
>BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 172
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 KSTQPLVSSTFSHPTPIAARNIAPKLPGTRILSQIKFNGIVLDFFLIFP--GVGVSNIPK 493
++ PL + T SH T P+ P R + K+N V D+ +P G+G + PK
Sbjct: 19 RNVMPLGARTASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEP-YPDDGMGYGDYPK 77
Query: 494 IPGEVQH 514
+P QH
Sbjct: 78 LPDRSQH 84
>L31573-1|AAA74886.1| 488|Homo sapiens sulfite oxidase protein.
Length = 488
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 295 RCRGTFSSTHLSIKEWNEMPEHTRPESAIFI 203
RCR STH+ KE E+ HT PE+ I++
Sbjct: 17 RCRAAQESTHIYTKE--EVSSHTSPETGIWV 45
>BC065193-1|AAH65193.2| 545|Homo sapiens sulfite oxidase protein.
Length = 545
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 295 RCRGTFSSTHLSIKEWNEMPEHTRPESAIFI 203
RCR STH+ KE E+ HT PE+ I++
Sbjct: 74 RCRAAQESTHIYTKE--EVSSHTSPETGIWV 102
>AY056018-1|AAL08048.1| 488|Homo sapiens sulfite oxidase protein.
Length = 488
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 295 RCRGTFSSTHLSIKEWNEMPEHTRPESAIFI 203
RCR STH+ KE E+ HT PE+ I++
Sbjct: 17 RCRAAQESTHIYTKE--EVSSHTSPETGIWV 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,988,643
Number of Sequences: 237096
Number of extensions: 1881922
Number of successful extensions: 7525
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7525
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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