Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40952
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   3.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 204 MKIADSGLVCSGISFHSLMDRWVLENVP 287
           M IAD     +   F  L+DRWV  NVP
Sbjct: 315 MFIADLNNQSTASDFKQLIDRWV-ANVP 341


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -3

Query: 498 GIFGIFETP---TPGNIKKKSNTIPLNFICDNI 409
           GI G   T     PGN+  K  ++ L ++ +NI
Sbjct: 161 GILGFLSTEDEVVPGNMGLKDQSMALRWVSENI 193


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -3

Query: 498 GIFGIFETP---TPGNIKKKSNTIPLNFICDNI 409
           GI G   T     PGN+  K  ++ L ++ +NI
Sbjct: 32  GILGFLSTEDEVVPGNMGLKDQSMALRWVSENI 64


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -3

Query: 498 GIFGIFETP---TPGNIKKKSNTIPLNFICDNI 409
           GI G   T     PGN+  K  ++ L ++ +NI
Sbjct: 161 GILGFLSTEDEVVPGNMGLKDQSMALRWVSENI 193


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 302 ITFGSHKSTQPLVSSTFSHPTPIAARNIAP 391
           I+ G H++ +P+V        P  A ++ P
Sbjct: 161 ISLGLHRANEPVVLDDSKEEHPTCALDLTP 190


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 507 TSPGIFGIFETPTPGNIKKKSNTIPLNFI 421
           TSP + G F   T  +IKK S  +  +++
Sbjct: 171 TSPPLLGCFPRATNRDIKKCSYNMDSSYV 199


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,036
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)