Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40945
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 336 RSYRIQSRGVQIQNRARSFRIRSHVQSPEPRVTTETIESR 217
           R Y +    + +    R+FR+RS V+  E R+  + I  R
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKR 530


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -3

Query: 274 PESRPKPRTQSHDRNYRIQGCDFQSRQIRNHDQNCRSRYDQNQNCRI 134
           PE R  P  QSH   +  Q    QS  +   + +   RY ++ N +I
Sbjct: 62  PEHRDLPIYQSHHHLHHHQVLYQQSPYLMYENPDEEKRYQEHPNGKI 108


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = -3

Query: 376 PNPESWCPNPESCPKLPNPESWCPNPESCPKLPNPESRPKPRT 248
           P P        S P LP P S    P+S  + PN      P T
Sbjct: 639 PLPPKRIRKMPSMPLLPRPISCHTTPDSFIEAPNKTLPSLPST 681


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = -1

Query: 579 PPNEVAMPSRPFSILSSSIPWSANWKYPLRV 487
           PP       RP   +  S   +  WK P R+
Sbjct: 131 PPGRFFCEVRPIKRVKDSTNCNCGWKNPSRI 161


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 358 CPNPESCPKLPNPE 317
           CP   +CP  PNP+
Sbjct: 213 CPPTLACPLNPNPQ 226



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 310 CPNPESCPKLPNPE 269
           CP   +CP  PNP+
Sbjct: 213 CPPTLACPLNPNPQ 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,417
Number of Sequences: 438
Number of extensions: 3940
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)